Miyakogusa Predicted Gene

chr1.LjT04O21.220.nd
Show Alignment: 

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.LjT04O21.220.nd
         (3321 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV423996  MWM034d04_r                                                 817   0.0  
AV427236  MWM078h03_r                                                 686   0.0  
AV406425  MWL002e05_r                                                 531   e-151
AV419617  MWM171h06_r                                                 500   e-141

>AV423996  MWM034d04_r;
          Length = 414

 Score =  817 bits (412), Expect = 0.0
 Identities = 412/412 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2242 gcaagcctttccctcaaacggacagccggaagtgacttcagcttggcaaaacccagcggc 2301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3    gcaagcctttccctcaaacggacagccggaagtgacttcagcttggcaaaacccagcggc 62

                                                                        
Query: 2302 agaacctgggaaagccgattgggaattggcattggtagagactgctagcaatttggcaaa 2361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63   agaacctgggaaagccgattgggaattggcattggtagagactgctagcaatttggcaaa 122

                                                                        
Query: 2362 ccagaaggcagctttaggtggtggccttgatcccttattgttgaatggcatgtatgatca 2421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123  ccagaaggcagctttaggtggtggccttgatcccttattgttgaatggcatgtatgatca 182

                                                                        
Query: 2422 aggaatggtgaggcagcatgtcagcactgccaatctgagtggaggaagtgcaagtagcgt 2481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183  aggaatggtgaggcagcatgtcagcactgccaatctgagtggaggaagtgcaagtagcgt 242

                                                                        
Query: 2482 ggcattgccaggaccggggaagaccacaacacctgttttagctcttccagccccagatgg 2541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243  ggcattgccaggaccggggaagaccacaacacctgttttagctcttccagccccagatgg 302

                                                                        
Query: 2542 atcggtgcagccagttaatcaggatccatttgcagcatcattgaccattccacccccttc 2601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303  atcggtgcagccagttaatcaggatccatttgcagcatcattgaccattccacccccttc 362

                                                                
Query: 2602 ctatgtgcaaatggctgatatggagaagaagcagcacttgctcgtgcaggag 2653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363  ctatgtgcaaatggctgatatggagaagaagcagcacttgctcgtgcaggag 414


>AV427236  MWM078h03_r;
          Length = 346

 Score =  686 bits (346), Expect = 0.0
 Identities = 346/346 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2784 gaatgggacctccaaccgggtattaccaagctccttactgattttgccacatacatatag 2843
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346  gaatgggacctccaaccgggtattaccaagctccttactgattttgccacatacatatag 287

                                                                        
Query: 2844 gttgtttcgtttattttcattttttactatgacatagtgtttttcctttgtttgaaatgg 2903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286  gttgtttcgtttattttcattttttactatgacatagtgtttttcctttgtttgaaatgg 227

                                                                        
Query: 2904 tgtcatcttattattcttgagacctgcacatcagtaggatggggatgctaaggagactga 2963
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226  tgtcatcttattattcttgagacctgcacatcagtaggatggggatgctaaggagactga 167

                                                                        
Query: 2964 gtttaacgaaacaacttcttgttgggttttggtgctgggagagatgtgtaactcagttgt 3023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166  gtttaacgaaacaacttcttgttgggttttggtgctgggagagatgtgtaactcagttgt 107

                                                                        
Query: 3024 attgtctctgtctgtgtcttttgtaatagtagcattttcttctccattttgtattcaagt 3083
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106  attgtctctgtctgtgtcttttgtaatagtagcattttcttctccattttgtattcaagt 47

                                                          
Query: 3084 gattcttgttccttgcaacaaacgcttaactactgtaaatttcatc 3129
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46   gattcttgttccttgcaacaaacgcttaactactgtaaatttcatc 1


>AV406425  MWL002e05_r;
          Length = 406

 Score =  531 bits (268), Expect = e-151
 Identities = 268/268 (100%)
 Strand = Plus / Plus

                                                                        
Query: 844  agattcgatggcttcgagcacgattcggaaggcgattggtgcggtgaaggaccagaccag 903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139  agattcgatggcttcgagcacgattcggaaggcgattggtgcggtgaaggaccagaccag 198

                                                                        
Query: 904  catagggatagccaaggtggcgagcaacatggcgccggagcttgaggtggcgattgtgaa 963
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199  catagggatagccaaggtggcgagcaacatggcgccggagcttgaggtggcgattgtgaa 258

                                                                        
Query: 964  ggcgacgagccacgatgaggatccggcgagtgagaagtacgcgcgggaggttttgaattt 1023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259  ggcgacgagccacgatgaggatccggcgagtgagaagtacgcgcgggaggttttgaattt 318

                                                                        
Query: 1024 gatgtcatactcgcgcggctatgttcacgcgtgtgtgtcggcggtgtctaagagattggg 1083
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319  gatgtcatactcgcgcggctatgttcacgcgtgtgtgtcggcggtgtctaagagattggg 378

                                        
Query: 1084 gaagacgagggactggatcgtggctttg 1111
            ||||||||||||||||||||||||||||
Sbjct: 379  gaagacgagggactggatcgtggctttg 406



 Score =  230 bits (116), Expect = 4e-60
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 525 atcgccgttccctcagatctcacctccggcaccgaccataaccgtttcaacttcctacag 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25  atcgccgttccctcagatctcacctccggcaccgaccataaccgtttcaacttcctacag 84

                                                                   
Query: 585 cagctacctaatcggagcctccaccaccgttttccgccgcggatctagcacctgag 640
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  cagctacctaatcggagcctccaccaccgttttccgccgcggatctagcacctgag 140


>AV419617  MWM171h06_r;
          Length = 252

 Score =  500 bits (252), Expect = e-141
 Identities = 252/252 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1746 ctttggctgtgttgcttgacaagttctttgatatggagtacacggattgcgtgaaggcct 1805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctttggctgtgttgcttgacaagttctttgatatggagtacacggattgcgtgaaggcct 60

                                                                        
Query: 1806 ttgatgcttatgcaagtgcggctaagcagattgatgagctggttgcattctataattggt 1865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttgatgcttatgcaagtgcggctaagcagattgatgagctggttgcattctataattggt 120

                                                                        
Query: 1866 gcaaggatacgggtgtggggaggtcctcggagtaccctgaagttcagaggattactgcta 1925
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcaaggatacgggtgtggggaggtcctcggagtaccctgaagttcagaggattactgcta 180

                                                                        
Query: 1926 agttgctggagacattggaggagtttgtgagggatagggccaagaggccgaaaagtcctg 1985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  agttgctggagacattggaggagtttgtgagggatagggccaagaggccgaaaagtcctg 240

                        
Query: 1986 agaggaaagagg 1997
            ||||||||||||
Sbjct: 241  agaggaaagagg 252