Miyakogusa Predicted Gene

chr1.CM0295.1160.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0295.1160.nc
         (4078 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC000168A_C01 R_KMC000168A_c01                                     690   0.0  

>R_KMC000168A_C01 R_KMC000168A_c01
          Length = 409

 Score =  690 bits (348), Expect = 0.0
 Identities = 389/409 (95%)
 Strand = Plus / Plus

                                                                       
Query: 477 cagagtagttgcggcggtgcaagcatggaggaagacggcgagatttacgacggtgctagg 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cagagtagttgcggcggtgcaagcatggaggaagacggcgagatttacgacggtgctagg 60

                                                                       
Query: 537 gctcaattccctctgagcttcggcaagcaatccaagtctcaaacccctctcgaagcaatc 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gctcaattccctctgagcttcggcaagcaatccaagtctcaaacccctctcgaagcaatc 120

                                                                       
Query: 597 cacaacgccactcgtcgttccaattccaaaaccaccaccgatttccctcccgtttcctct 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacaacgccactcgtcgttccaattccaaaaccaccaccgatttccctcccgtttcctct 180

                                                                       
Query: 657 tcttccaaggaatggctcagctccctccgcccctccaaaaaccccaccgcacctcctccg 716
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcttccaaggaatggctcagctccctccgcccctccaaaaaccccaccgcacctcctccg 240

                                                                       
Query: 717 cccgaacaggaggacgacgacggccccctggtgggaccccctccacctcccccatcgcaa 776
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 cccgaacaggaggacgacgacggccccctggtgggaccccctccacctcccccatcggaa 300

                                                                       
Query: 777 caacaacccgatgacgacggcgagatgtttgnnnnnnnnnnnnnnnnnnntgcctccaat 836
           |||||||||||||||||||||||||||||||                   ||||||||||
Sbjct: 301 caacaacccgatgacgacggcgagatgtttggcccgtccccgccgacccctgcctccaat 360

                                                            
Query: 837 ttcaatgactcggactccgaacaagattccgatcaagacgatgtcggaa 885
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaatgactcggactccgaacaagattccgatcaagacgatgtcggaa 409