Miyakogusa Predicted Gene

chr1.CM0098.420.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0098.420.nd
         (1584 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC001767A_C01 R_KMC001767A_c01                                     379   e-105
R_KMC000273A_C01 R_KMC000273A_c01                                     367   e-101
R_KMC000738A_C01 R_KMC000738A_c01                                      58   2e-08

>R_KMC001767A_C01 R_KMC001767A_c01
          Length = 193

 Score =  379 bits (191), Expect = e-105
 Identities = 191/191 (100%)
 Strand = Plus / Plus

                                                                        
Query: 858  gccgacgaggacgtttctcatcggaaaatcttcgttcacggcctcgggtgggataccacc 917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3    gccgacgaggacgtttctcatcggaaaatcttcgttcacggcctcgggtgggataccacc 62

                                                                        
Query: 918  gccacgacgctggtttacgcgttccagcagtacggcgcgattgaggattgcaaggcggtt 977
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63   gccacgacgctggtttacgcgttccagcagtacggcgcgattgaggattgcaaggcggtt 122

                                                                        
Query: 978  accgataaggtcaccgggaagtcgaaggggtacgggtttattctcttcaagtcgcggcgt 1037
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123  accgataaggtcaccgggaagtcgaaggggtacgggtttattctcttcaagtcgcggcgt 182

                       
Query: 1038 ggtgcgcgtaa 1048
            |||||||||||
Sbjct: 183  ggtgcgcgtaa 193


>R_KMC000273A_C01 R_KMC000273A_c01
          Length = 247

 Score =  367 bits (185), Expect = e-101
 Identities = 185/185 (100%)
 Strand = Plus / Plus

                                                                       
Query: 419 gatcgtaatctagtccaaatctgaaaaccctagtttcaaccctcactcactcgcttcact 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   gatcgtaatctagtccaaatctgaaaaccctagtttcaaccctcactcactcgcttcact 63

                                                                       
Query: 479 ccaagaatcaccaaacgaagccatggttaacgaatccatcaccaagaagcgaaagctcgt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  ccaagaatcaccaaacgaagccatggttaacgaatccatcaccaagaagcgaaagctcgt 123

                                                                       
Query: 539 ccccaaatcctctcaatcggcggagctaccgttcaagctgcagaacaagttggaggctga 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ccccaaatcctctcaatcggcggagctaccgttcaagctgcagaacaagttggaggctga 183

                
Query: 599 ggttc 603
           |||||
Sbjct: 184 ggttc 188


>R_KMC000738A_C01 R_KMC000738A_c01
          Length = 731

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                     
Query: 946  agtacggcgcgattgaggattgcaaggcggttaccgataaggtcaccgggaagtcga 1002
            ||||||| | ||| ||||||||||||||||||||||| ||||| || ||||| ||||
Sbjct: 675  agtacggtgagatcgaggattgcaaggcggttaccgacaaggttactgggaaatcga 731