Miyakogusa Predicted Gene

chr6.LjT34E09.90.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr6.LjT34E09.90.nc
         (2944 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC020398A_C01 KMC020398A_c01                                         188   4e-47

>KMC020398A_C01 KMC020398A_c01;
          Length = 577

 Score =  188 bits (95), Expect = 4e-47
 Identities = 352/437 (80%), Gaps = 3/437 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2020 catccccaacgcttgctgctgcttcttctctaggacttttttcagggcctggatcagcgg 2079
            |||| |||||||||||||| ||| ||||||| ||||||||||| |||   |||||||| |
Sbjct: 577  catctccaacgcttgctgccgctgcttctctgggacttttttccgggataggatcagctg 518

                                                                        
Query: 2080 cgacatcaggagcggcttctccggtagactggagcactggtgggtcaatcaagttcgatt 2139
            | || ||||| ||  |||||||||||||||||||||||||||||||  |  ||||||| |
Sbjct: 517  ccacttcaggggcatcttctccggtagactggagcactggtgggtcggtgcagttcgact 458

                                                                        
Query: 2140 atacaaacatagactggtccttagataggggttcatctcctccaaggtccaatgcattat 2199
            |||| | ||||||||||||||| ||||| |||| | || | |||||||| ||| | ||||
Sbjct: 457  ataccagcatagactggtccttggatagaggtttagcttcgccaaggtcaaatcctttat 398

                                                                        
Query: 2200 ggcgaggactttcaccttttataaagagtaatgctcaaataaatggctcaaatgcttctg 2259
            ||  ||| |||||||||| |  ||| |  | |||||| |   ||| ||||| ||||||||
Sbjct: 397  ggttagggctttcaccttattcaaaaaccagtgctcatacgtatgactcaagtgcttctg 338

                                                                        
Query: 2260 gcatggctgctcaaccgtcaattagatcattaccctctaatgggagcatgggtccgttgc 2319
            |    |||||||||| | |||| |||||| | ||||| ||||||||||| |  ||  |||
Sbjct: 337  gtgctgctgctcaactgccaatgagatcagtgccctcaaatgggagcattgtgcccatgc 278

                                                                        
Query: 2320 atggattgcaagatggtggagcatcttct---tctgcagaaatgtctggttctcgagaat 2376
             ||||| ||||||||| |||| | |||||     ||||       |||||||||| || |
Sbjct: 277  ctggatcgcaagatggcggagtagcttctggcgatgcatctgctgctggttctcgggatt 218

                                                                        
Query: 2377 ggagttctccatttgaagggaaagatatttttactttacctagacagtttgtttcttctc 2436
            |||||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||
Sbjct: 217  ggagttctccgtttgaagggaaagatctttttagtttaccgagacagtttgtttcttctc 158

                             
Query: 2437 cttctctgtaaaatgag 2453
            |||||||||| ||||||
Sbjct: 157  cttctctgtagaatgag 141