Miyakogusa Predicted Gene

chr6.CM0885.30.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr6.CM0885.30.nc
         (3209 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BP082166  MR080f03_f                                                  731   0.0  
KMC003929A_C01 KMC003929A_c01                                          46   4e-04

>BP082166  MR080f03_f;
          Length = 378

 Score =  731 bits (369), Expect = 0.0
 Identities = 372/373 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2538 tattgttgaggaggccaagaccccagctaaagtacccaggtcaatcggagggtatggttg 2597
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378  tattgttgaggaggcccagaccccagctaaagtacccaggtcaatcggagggtatggttg 319

                                                                        
Query: 2598 gggagaagaagatgatgatgaagcaaaagaagaagcagaggctgaggtggaagaagatga 2657
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318  gggagaagaagatgatgatgaagcaaaagaagaagcagaggctgaggtggaagaagatga 259

                                                                        
Query: 2658 gtatgaaaaaagcgtcaaggaagcacaggctagcggagaaattaatgtcagttaaaaaga 2717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258  gtatgaaaaaagcgtcaaggaagcacaggctagcggagaaattaatgtcagttaaaaaga 199

                                                                        
Query: 2718 ggaaatgtttattattagatagagaagtagattcttggtttcctttgctcttggttaagc 2777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198  ggaaatgtttattattagatagagaagtagattcttggtttcctttgctcttggttaagc 139

                                                                        
Query: 2778 tcaactaagttgagacttgagagtgttttgcttgtatttataaaatccagttttctgcat 2837
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138  tcaactaagttgagacttgagagtgttttgcttgtatttataaaatccagttttctgcat 79

                                                                        
Query: 2838 aggacataattatatatgcatgtacatttttagtattgtagagggttgttaattgtgacc 2897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78   aggacataattatatatgcatgtacatttttagtattgtagagggttgttaattgtgacc 19

                         
Query: 2898 atattacatgtat 2910
            |||||||||||||
Sbjct: 18   atattacatgtat 6


>KMC003929A_C01 KMC003929A_c01;
          Length = 632

 Score = 46.1 bits (23), Expect = 4e-04
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1435 ggaactccagcatacattgcaccagaggttctttcacgtagagaatatgatggaaaggt 1493
            |||||||| ||||||||||| || |||||||| ||||| |  || ||||| ||||||||
Sbjct: 549  ggaactcctgcatacattgctcccgaggttctgtcacgaaaggagtatgacggaaaggt 607