Miyakogusa Predicted Gene

chr6.CM0057.480.nc
Show Alignment: 

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr6.CM0057.480.nc
         (3919 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BP053778  SPDL029a12_f                                                583   e-165
BP049986  SPD075d01_f                                                  46   5e-04

>BP053778  SPDL029a12_f;
          Length = 589

 Score =  583 bits (294), Expect = e-165
 Identities = 309/313 (98%), Gaps = 1/313 (0%)
 Strand = Plus / Minus

                                                                        
Query: 3096 aggtcgagtttgtctcgaggcaatccttctgataagtcatctagtaagcggaaagagaag 3155
            ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 589  aggtcgagtttgtctcgag-cnatccttctgataagtcatctagtaagcggaaagagaag 531

                                                                        
Query: 3156 aagaaactaggcacatcctctgaaatgaaagaaaatctaggtgatgcagaaaagcctgat 3215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530  aagaaactaggcacatcctctgaaatgaaagaaaatctaggtgatgcagaaaagcctgat 471

                                                                        
Query: 3216 actgaaaacccaaataccagtgaaaatcatggtcataaagagagaaggcggagaggtaag 3275
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470  actgaaaaccccaataccagtgaaaatcatggtcataaagagagaaggcggagaggtaag 411

                                                                        
Query: 3276 gataagattgttgaaggggaagaacatggtcagaaggtaaagaaaaagagcagccaccgc 3335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410  gataagattgttgaaggggaagaacatggtcagaaggtaaagaaaaagagcagccaccgc 351

                                                                        
Query: 3336 catggtaggcgcaaaactcatcaaagagctgaatcacccttaaatgtggtttcccaaaca 3395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 350  catggtaggcgcaaaactcatcaaagagctgaatcacccttaaatgtggtttccccaaca 291

                         
Query: 3396 ccagtaattcctg 3408
            |||||||||||||
Sbjct: 290  ccagtaattcctg 278



 Score =  349 bits (176), Expect = 3e-95
 Identities = 179/180 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3462 atagaggctgtttacctgtatcttagtgctgagcctttaacctagttccatagatttttg 3521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224  atagaggctgtttacctgtatcttagtgctgagcctttaacctagttccatagatttttg 165

                                                                        
Query: 3522 ttttcctttgtgtgtgtcatttcttgtaatttgttgatacttgatactattttcattgct 3581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164  ttttcctttgtgtgtgtcatttcttgtaatttgttgatacttgatactattttcattgct 105

                                                                        
Query: 3582 tgttgcctgttttttgtatatttcacagaacgagcatattaagaagtaaaatttcaagtt 3641
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104  tgttgcctgttttttgtatatttcaccgaacgagcatattaagaagtaaaatttcaagtt 45


>BP049986  SPD075d01_f;
          Length = 624

 Score = 46.1 bits (23), Expect = 5e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 471 tcacttcctcctccttctcctcctcca 497
           ||||||||||||||| |||||||||||
Sbjct: 455 tcacttcctcctcctcctcctcctcca 481