Miyakogusa Predicted Gene
- chr5.CM1439.180.nd
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr5.CM1439.180.nd
(6006 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMC003217A_C01 KMC003217A_c01 389 e-107
BP077953 MR025h09_f 123 4e-27
KMC008816A_C01 KMC008816A_c01 96 9e-19
BP084275 MRL011f07_f 54 3e-06
KMC017244A_C01 KMC017244A_c01 48 2e-04
AV780685 MPDL081a01_f 46 8e-04
>KMC003217A_C01 KMC003217A_c01;
Length = 462
Score = 389 bits (196), Expect = e-107
Identities = 265/286 (92%), Gaps = 5/286 (1%)
Strand = Plus / Minus
Query: 5456 caggtttgccctgtttgca-gtactgaggtatctgcttctgggagcaacttataggagaa 5514
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 300 caggtttgccctgtttgcacgtactgaggtatctgcttttgggagcaacttataggagaa 241
Query: 5515 ttccatagttcttaaacttcttggcttca-aattgaagaaaatttgtgcaagttgggagt 5573
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 240 ttccatagttcttaaacttcttggcttcacaattgaagaaaatttgtgctagttgggagt 181
Query: 5574 ttttaccccgtta-tttaagtagcattgctttgttggggtga-tagtcattgtgctttac 5631
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 180 ttttaccccgttactttaagtagcattgctttgttggggtgagtagtcattgtgctttac 121
Query: 5632 tgtatcaaactcctaca-ttttaaatgtaacttaaacttttggattcagctctctagttt 5690
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgtatcaaactcctacacttttaaatgtaacttaaacttttggattcagctctctagttt 61
Query: 5691 gtcnnnnnnnnnnnnnnaaaatggaatgactggcattataggggcc 5736
||| |||||||||||||||||||||||||||||
Sbjct: 60 gtctttttactttttttaaaatggaatgactggcattataggggcc 15
Score = 184 bits (93), Expect = 1e-45
Identities = 102/105 (97%)
Strand = Plus / Minus
Query: 3786 gtgtgttatttgtcgggtggactatgaggatgacgagtccttgacagttctttcctgcaa 3845
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 406 gtgtgttatttgtcgggtggactatgaggatgacgagtccttgaccgttctttcctgcca 347
Query: 3846 acatctgtaccatcctgagtgcattaacaattggttgaaaataaa 3890
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 346 acatctgtaccatcctgagtgcattaaccattggttgaaaataaa 302
Score = 83.8 bits (42), Expect = 4e-15
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 3652 ctttgccttcaatcaagtacaagac-tgggaatgatcaacatggaagcaatgattcgt 3708
|||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||
Sbjct: 462 ctttgccttcaatcaagtaccagacctgggaatgatcaacatggaagccatgattcgt 405
>BP077953 MR025h09_f;
Length = 377
Score = 123 bits (62), Expect = 4e-27
Identities = 110/126 (87%)
Strand = Plus / Minus
Query: 3583 aggaactactagcattgggtgaagtagttggaactgaaagcagaggtcttacaacagata 3642
|||| |||||||||||||| ||||| || |||| |||||||||||| ||| ||| ||||
Sbjct: 355 aggagctactagcattgggggaagtggtaggaattgaaagcagaggacttccaattgata 296
Query: 3643 ctattgcctctttgccttcaatcaagtacaagactgggaatgatcaacatggaagcaatg 3702
||||||| | ||||||||| ||||||||||||| | ||||||||||||||||||||| |
Sbjct: 295 ctattgcatacttgccttcagtcaagtacaagaccgagaatgatcaacatggaagcaacg 236
Query: 3703 attcgt 3708
||||||
Sbjct: 235 attcgt 230
Score = 105 bits (53), Expect = 1e-21
Identities = 142/168 (84%), Gaps = 14/168 (8%)
Strand = Plus / Minus
Query: 5477 actgaggtatctgcttctgggagcaacttataggagaattccatagttcttaaacttctt 5536
|||||| ||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 198 actgagatatctgcttctgggagcaacttataggagaaactcatagttcttca------- 146
Query: 5537 ggcttcaaattgaagaaaatttgtgcaagttgggagtttttaccccgttatttaagt-ag 5595
|||||||||||||||||| ||||||||||| ||||| ||||||| |||||| ||| ||
Sbjct: 145 --cttcaaattgaagaaaatatgtgcaagttgcgagttattacccc-ttattttagtaag 89
Query: 5596 cattgctttgttggggtgatagtcattgtgctttactgtatcaaactc 5643
||||||||||| ||| ||| |||||| ||||| ||||||||||||||
Sbjct: 88 cattgctttgtcggg--gat-gtcattatgcttcactgtatcaaactc 44
Score = 56.0 bits (28), Expect = 8e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 3786 gtgtgttatttgtcgggtggactatgaggatg 3817
|||||||||||||||| |||||||||||||||
Sbjct: 231 gtgtgttatttgtcggttggactatgaggatg 200
>KMC008816A_C01 KMC008816A_c01;
Length = 465
Score = 95.6 bits (48), Expect = 9e-19
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 3583 aggaactactagcattgggtgaagtagttggaactgaaagcagaggtcttacaacagata 3642
|||| |||||||||||| | ||||| || |||| |||||||||||| ||| |||| |||
Sbjct: 383 aggagctactagcattgtgggaagtggtaggaattgaaagcagaggacttccaactaata 324
Query: 3643 ctattgcctctttgccttcaatcaagtacaagactgggaatgatcaacatggaagcaatg 3702
||||| | | |||||||||| |||| ||| |||| |||||||||||||| |||||| |||
Sbjct: 323 ctattacatatttgccttcagtcaactaccagaccgggaatgatcaacacggaagccatg 264
Query: 3703 attc 3706
||||
Sbjct: 263 attc 260
Score = 81.8 bits (41), Expect = 1e-14
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 5479 tgaggtatctgcttctgggagcaacttataggagaattccatagttctt 5527
|||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 226 tgaggtatctgcttctgggagccacttataggagaaatccatagttctt 178
Score = 67.9 bits (34), Expect = 2e-10
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 3446 caggatgcttgggaggatgttgatccagacgaactttc 3483
||||||||||||| ||||||||||||||||||||||||
Sbjct: 426 caggatgcttggggggatgttgatccagacgaactttc 389
Score = 54.0 bits (27), Expect = 3e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5654 aatgtaacttaaacttttggattcagctctctagtttgt 5692
|||||||||| |||||||||||| |||||||||| ||||
Sbjct: 83 aatgtaactttaacttttggatttagctctctagattgt 45
>BP084275 MRL011f07_f;
Length = 118
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3248 cattgttgttgttgttcttcttcttca 3274
|||||||||||||||||||||||||||
Sbjct: 79 cattgttgttgttgttcttcttcttca 53
>KMC017244A_C01 KMC017244A_c01;
Length = 624
Score = 48.1 bits (24), Expect = 2e-04
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3250 ttgttgttgttgttcttcttcttc 3273
||||||||||||||||||||||||
Sbjct: 109 ttgttgttgttgttcttcttcttc 86
>AV780685 MPDL081a01_f;
Length = 93
Score = 46.1 bits (23), Expect = 8e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 3251 tgttgttgttgttcttcttcttc 3273
|||||||||||||||||||||||
Sbjct: 88 tgttgttgttgttcttcttcttc 66