Miyakogusa Predicted Gene
- chr5.CM0052.240.nd
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr5.CM0052.240.nd
(2383 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP028539 MF006c09_f 230 1e-59
AV765309 MWM040f04_f 58 8e-08
BP077706 MR022g10_f 46 3e-04
>BP028539 MF006c09_f;
Length = 444
Score = 230 bits (116), Expect = 1e-59
Identities = 201/224 (89%), Gaps = 4/224 (1%)
Strand = Plus / Plus
Query: 2161 gaattgaccacagtaaatatattaatt-gatgaggttgtagatacctcacattgtcaaca 2219
|||| ||||||| |||||||||||||| |||||||| ||| | |||||||| |||||||
Sbjct: 1 gaatggaccacaataaatatattaatttgatgaggt-gtatagacctcacaa-gtcaaca 58
Query: 2220 cttgaatagtaataaaaatcaaagtttttaagtaatgcattacatggaaattgaaataag 2279
|||||||||||||| |||||| ||||||||| ||||||||| || ||||||||||| ||
Sbjct: 59 tttgaatagtaataagaatcaa-gtttttaaggaatgcattatattgaaattgaaatgag 117
Query: 2280 ataaacataacaatgacagcaacatgaacgcttattcgaaattgtagtccatgattaatg 2339
|||||||||||||||||| |||||||||| |||||| ||| |||||||||||||||||||
Sbjct: 118 ataaacataacaatgacaacaacatgaacccttattagaagttgtagtccatgattaatg 177
Query: 2340 ataaagacttcataaccgagcttgttgtcaatcaagcatatttg 2383
||||| ||||||||| ||| |||||||| |||||||||||||||
Sbjct: 178 ataaaaacttcataaacgatcttgttgttaatcaagcatatttg 221
>AV765309 MWM040f04_f;
Length = 616
Score = 58.0 bits (29), Expect = 8e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1710 ttttcaccctccagtcaactctcctctgcttcatttcccctgttttctggtcagcaagtg 1769
|||||||| || | ||| || ||| ||||||||||||||||||||||| |||| ||| ||
Sbjct: 355 ttttcaccatctactcagctttcccctgcttcatttcccctgttttctagtcaacaactg 296
Query: 1770 gggcttttccggccgcc 1786
|| ||| |||||||||
Sbjct: 295 ggaatttcccggccgcc 279
Score = 46.1 bits (23), Expect = 3e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1842 tcaacatggtcagatacaagtggctatccaccacctcctggttgatt 1888
||||| ||||||||||| |||||| ||| ||||||| |||||||||
Sbjct: 217 tcaacgtggtcagataccagtggccatcgaccaccttatggttgatt 171
>BP077706 MR022g10_f;
Length = 422
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1636 ttcattcttcttcttcttcattg 1658
|||||||||||||||||||||||
Sbjct: 172 ttcattcttcttcttcttcattg 194