Miyakogusa Predicted Gene

chr4.CM0617.290.nd
Show Alignment: 
BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr4.CM0617.290.nd
         (2244 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV773843  MPD057h03_f                                                 656   0.0  
KMC000544A_C10 KMC000544A_c10                                         480   e-135
BP072079  GNf063h05                                                   204   5e-52

>AV773843  MPD057h03_f;
          Length = 462

 Score =  656 bits (331), Expect = 0.0
 Identities = 341/343 (99%), Gaps = 1/343 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1040 aggttgcatcataaaaacaatccatggctgacgaaacacaattaatggaacctggaagag 1099
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117  aggttgcatcataaaaacaatccatggctgacgaaacacaattaatggaacctggaagag 176

                                                                        
Query: 1100 atccaagaaagaggaagtttgttaaaaatcagcgccataaaaattctaagctgagaccga 1159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177  atccaagaaagaggaagtttgttaaaaatcagcgccataaaaattctaagctgagaccga 236

                                                                        
Query: 1160 aagggaagccagcacaacatggacaaaagaaagttaaagtaaaccaagaaatgaagaaac 1219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237  aagggaagccagcacaacatggacaaaagaaagttaaagtaaaccaagaaatgaagaaac 296

                                                                        
Query: 1220 tttatcacaagcgagcacgagagtataattctgatgacgatgaagaagatgagaccgctg 1279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297  tttatcacaagcgagcacgagagtataattctgatgacgatgaagaagatgagaccgctg 356

                                                                        
Query: 1280 tccct-gctaccacgaggcctagaaggatgacatctatcaaatatgaaaagaatgaggtg 1338
            ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357  tccctggctagcacgaggcctagaaggatgacatctatcaaatatgaaaagaatgaggtg 416

                                                       
Query: 1339 gatgacatagaaaatgaagatctgtctgatgatgaaggagcgg 1381
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417  gatgacatagaaaatgaagatctgtctgatgatgaaggagcgg 459



 Score =  194 bits (98), Expect = 5e-49
 Identities = 104/106 (98%)
 Strand = Plus / Plus

                                                                       
Query: 514 cctcacctcaaaggagaggagcgaccaaaccttccaatcactaagagtaacgacagcgcg 573
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17  cctcacctcaaaggagaggagcgaccaaaccttccaatcactaagagtaacgacagcgcg 76

                                                         
Query: 574 gcggccaccggcgacgacgcgtgcggcggttctcctccccaggttg 619
           |||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 77  gcgggcagcggcgacgacgcgtgcggcggttctcctccccaggttg 122


>KMC000544A_C10 KMC000544A_c10;
          Length = 881

 Score =  480 bits (242), Expect = e-135
 Identities = 290/310 (93%)
 Strand = Plus / Plus

                                                                       
Query: 16  aatactccctccggtcctatttataagcatgaaagagaagaaaaatcttggtccttttta 75
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 203 aatactccctccggtcctatttataagcatgaaagagaagaaaaacattggtccttttta 262

                                                                       
Query: 76  taagaaccaaatgaaagtttgagctatattaattaattttttccaatgatgcccttatta 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taagaaccaaatgaaagtttgagctatattaattaattttttccaatgatgcccttatta 322

                                                                       
Query: 136 attctaacttgtaaaatgtgtctcattaattattctctctctttttcactttccaacact 195
           ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||
Sbjct: 323 attctaacttgtaaaatgtgtttcattaattattctctctctttcccactttccaacact 382

                                                                       
Query: 196 aataacaaagggtaattttggaagttcattttaatttaagacaaatttaatgcattttat 255
           |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 383 aataacaaagggtaattttggaagtttattttgatttaagacaaatttaatgcattttat 442

                                                                       
Query: 256 ctagtttaactacatttcttaaactatgtgaannnnnnnnnnnngcttataaataggacc 315
           ||| ||||||||||||||||||||||||||||            ||||||||||||||||
Sbjct: 443 ctactttaactacatttcttaaactatgtgaatttttttttgttgcttataaataggacc 502

                     
Query: 316 ggagggagta 325
           ||||||||||
Sbjct: 503 ggagggagta 512



 Score = 58.0 bits (29), Expect = 8e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 16  aatactccctccggtcctatttataagca 44
           |||||||||||||||||||||||||||||
Sbjct: 514 aatactccctccggtcctatttataagca 486



 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 300 gcttataaataggaccggagggagta 325
           ||||||||||||||||||||||||||
Sbjct: 230 gcttataaataggaccggagggagta 205


>BP072079  GNf063h05;
          Length = 169

 Score =  204 bits (103), Expect = 5e-52
 Identities = 147/159 (92%), Gaps = 2/159 (1%)
 Strand = Plus / Minus

                                                                       
Query: 65  ggtcctttttataagaaccaaatgaaagtttgagctatattaattaattttttccaatga 124
           ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 169 ggtcctttttataagaacccaatgaaagtttgagctatattaattatttttttcccatga 110

                                                                       
Query: 125 tgcccttattaatt-ctaacttgtaaaatgtgtctcattaattattctctctctttttca 183
           |||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||  | 
Sbjct: 109 tgcccttatttattcctagcttgtaaaatgtgtctcattaattattctctctctttcccc 50

                                                  
Query: 184 ctttccaac-actaataacaaagggtaattttggaagtt 221
           |||||| || ||||||||| |||||||||||||||||||
Sbjct: 49  ctttcccacaactaataaccaagggtaattttggaagtt 11