Miyakogusa Predicted Gene

chr4.CM0387.130.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr4.CM0387.130.nc
         (3228 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC005186A_C01 KMC005186A_c01                                          54   2e-06
BP052179  SPDL003e04_f                                                 50   3e-05
KMC001265A_C01 KMC001265A_c01                                          50   3e-05
AV768946  MWL022g03_f                                                  48   1e-04

>KMC005186A_C01 KMC005186A_c01;
          Length = 1023

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 688 ttattcataacctaatttgataaatttattgaaataagtcgaaaata 734
           |||||| ||| ||||||||||||  ||||||||||||||| ||||||
Sbjct: 123 ttattcgtaagctaatttgataagcttattgaaataagtccaaaata 77


>BP052179  SPDL003e04_f;
          Length = 473

 Score = 50.1 bits (25), Expect = 3e-05
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 713 ttattgaaataagtcgaaaataggttata 741
           |||||||||||||| ||||||||||||||
Sbjct: 78  ttattgaaataagttgaaaataggttata 106


>KMC001265A_C01 KMC001265A_c01;
          Length = 558

 Score = 50.1 bits (25), Expect = 3e-05
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 1745 tgttgagaagttacacattgactagagatatgactaa 1781
            |||||||||||  ||||||||| ||||||||||||||
Sbjct: 293  tgttgagaagtctcacattgacaagagatatgactaa 329


>AV768946  MWL022g03_f;
          Length = 446

 Score = 48.1 bits (24), Expect = 1e-04
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 1745 tgttgagaagttacacattgactagagatatg 1776
            |||||||||||  |||||||||||||||||||
Sbjct: 121  tgttgagaagtctcacattgactagagatatg 152