Miyakogusa Predicted Gene

chr4.CM0007.1100.nc
Show Alignment: 

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr4.CM0007.1100.nc
         (4353 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC013048A_C01 KMC013048A_c01                                        1183   0.0  

>KMC013048A_C01 KMC013048A_c01;
          Length = 613

 Score = 1183 bits (597), Expect = 0.0
 Identities = 608/613 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3623 aaatttgagtggaccagagagcagttcgaacaatgggcatctgacttagctgcgcggcac 3682
            |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 613  aaatttgagtggaccagagaccagttcgaacaatggncatctgacttagctgcgcggcac 554

                                                                        
Query: 3683 aattacagtgtggagttcagtggggttggtggttctgctgatgttgaaccaggctttgcc 3742
            |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct: 553  aattacagtgtggagttcagtgggnttgntgnttctgctgatgttgaaccaggctttgcc 494

                                                                        
Query: 3743 tcgcagattgctgtgtttaaaagggattggaaacttgaagatgacatcctgaagcaagct 3802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493  tcgcagattgctgtgtttaaaagggattggaaacttgaagatgacatcctgaagcaagct 434

                                                                        
Query: 3803 gatacagaacgccattataacgtaatatgggaatggaatagtataaacaactgaattttc 3862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433  gatacagaacgccattataacgtaatatgggaatggaatagtataaacaactgaattttc 374

                                                                        
Query: 3863 agaagaagaaaaaacaactaacagtgtgaggcttgtacagctctttttggtgcaggattt 3922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373  agaagaagaaaaaacaactaacagtgtgaggcttgtacagctctttttggtgcaggattt 314

                                                                        
Query: 3923 tttggatagatgacaagcaaaatagaaatgatgctaggagaagggaaaaatagtatttag 3982
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313  tttggatagatgacaagcaaaatagaaatgatgctaggagaagggaaaaatagtatttag 254

                                                                        
Query: 3983 agggtttaggtagggcatggatattttgagtttagtagtccaatttaaggagaaaccatg 4042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253  agggtttaggtagggcatggatattttgagtttagtagtccaatttaaggagaaaccatg 194

                                                                        
Query: 4043 ttcctgttatggtagaatgccaagtagatagtgaccaggtatttattagtagttttcagc 4102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193  ttcctgttatggtagaatgccaagtagatagtgaccaggtatttattagtagttttcagc 134

                                                                        
Query: 4103 catgagaacaagaattggatgtttgctttctttgtctattcatatggcgtctaaattata 4162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133  catgagaacaagaattggatgtttgctttctttgtctattcatatggcgtctaaattata 74

                                                                        
Query: 4163 tattacagttgtcagaaagtaacaggaaatgttatgagcatgttttttccattattaatt 4222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73   tattacagttgtcagaaagtaacaggaaatgttatgagcatgttttttccattattaatt 14

                         
Query: 4223 gtttgcagttgtt 4235
            |||||||||||||
Sbjct: 13   gtttgcagttgtt 1