Miyakogusa Predicted Gene
- chr3.LjT34H24.100.nd
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr3.LjT34H24.100.nd
(3938 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP069595 GNf031b01 724 0.0
BP030009 MF033b01_f 133 3e-30
KMC005805A_C01 KMC005805A_c01 62 8e-09
>BP069595 GNf031b01;
Length = 420
Score = 724 bits (365), Expect = 0.0
Identities = 404/421 (95%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 3372 tcggggaagtttgtctcctgcttcgaggaatgtagctagtcctggtagccgaagcagaag 3431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tcggggaagtttgtctcctgcttcgaggaatgtagctagtcctggtagccgaagcagaag 361
Query: 3432 agggtattaagcaatataaatgatgatgattttgctaaaatggaatgtttaattcatctt 3491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agggtattaagcaatataaatgatgatgattttgctaaaatggaatgtttaattcatctt 301
Query: 3492 gatgttgtaatgttgttgcctcggcaatgtgtgctaccatgaaaatggggctataatgaa 3551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gatgttgtaatgttgttgcctcggcaatgtgtgctaccatgaaaatggggctataatgaa 241
Query: 3552 gtattttgctagtgggtctatgggtgcaagtacgagcatataggtacttagagagttaga 3611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtattttgctagtgggtctatgggtgcaagtacgagcatataggtacttagagagttaga 181
Query: 3612 gggtactggctggggcaagcgttcaagttactatctattgggtatggtggcaggttcatg 3671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gggtactggctggggcaagcgttcaagttactatctattgggtatggtggcaggttcatg 121
Query: 3672 tannnnnnnnnnnnnnnngataattaggagggccaacgacccaaaactacaaactacact 3731
|| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 120 tatttttatttttattttgataattaggagggcc-acgacccaaaactacaaactacact 62
Query: 3732 actctagtcattgtcattgtcattcctaatgcatgtatggggacaaatactatagtaccc 3791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actctagtcattgtcattgtcattcctaatgcatgtatggggacaaatactatagtaccc 2
Query: 3792 t 3792
|
Sbjct: 1 t 1
>BP030009 MF033b01_f;
Length = 629
Score = 133 bits (67), Expect = 3e-30
Identities = 115/124 (92%), Gaps = 9/124 (7%)
Strand = Plus / Minus
Query: 3305 gtgaagcaagtttaagttctccccgtcgagttgcatcacctgtacat--caagttgcatc 3362
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 629 gtgaagcaagtttaagttctccccgtcgagttgcatcacctgtacatnncaagttgcatc 570
Query: 3363 tcct-gttcatc-ggggaagtttgtctcctgc--ttcgag--gaatgtagctag-tcctg 3415
|||| ||||||| ||||||||||||||||||| |||||| |||||||||||| |||||
Sbjct: 569 tcctngttcatcnggggaagtttgtctcctgcnnttcgagnngaatgtagctagttcctg 510
Query: 3416 gtag 3419
||||
Sbjct: 509 gtag 506
Score = 61.9 bits (31), Expect = 8e-09
Identities = 86/96 (89%), Gaps = 9/96 (9%)
Strand = Plus / Minus
Query: 3711 cccaaaactacaaac-taca-ctactctagtcattg--tcattgtc--attcctaat-gc 3763
||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||| ||
Sbjct: 96 cccaaaactacaaacatacanctactctagtcattgnntcattgtcnnattcctaatagc 37
Query: 3764 a-tgta-tggggacaaatactatagtaccctaactc 3797
| |||| |||||||| ||||||||||||||||||||
Sbjct: 36 aatgtantggggacanatactatagtaccctaactc 1
>KMC005805A_C01 KMC005805A_c01;
Length = 649
Score = 61.9 bits (31), Expect = 8e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 171 atgtaattaaattaggtgggggaccaaaatcgtagcattggtaaacatcggggaccaaag 230
|||||||||||| |||| |||||| |||||||| || || |||||| | ||||||||||
Sbjct: 140 atgtaattaaataaggttggggactaaaatcgtggctttagtaaacgttagggaccaaag 199
Query: 231 ttgtaattaagccat 245
|| |||||||||||
Sbjct: 200 atgcaattaagccat 214