Miyakogusa Predicted Gene

chr3.LjT23H01.130.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.LjT23H01.130.nc
         (4059 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC002861A_C01 KMC002861A_c01                                         214   1e-54
BP073030  GNf077a08                                                    56   5e-07

>KMC002861A_C01 KMC002861A_c01;
          Length = 704

 Score =  214 bits (108), Expect = 1e-54
 Identities = 220/258 (85%)
 Strand = Plus / Minus

                                                                        
Query: 3205 gtatttgccatcctgttttgcagaaaagcatttgaatggtgtttcgggattcattaaact 3264
            |||| |||| ||||| |||||||||||| ||||||||||  ||||||||||||| |||||
Sbjct: 681  gtatctgccttcctgctttgcagaaaagaatttgaatgggntttcgggattcatcaaact 622

                                                                        
Query: 3265 tcaaacctctgatgggagacagtggccggttcgctgcctttatagaggaggtagagccaa 3324
            |||     | |||||||||||||| || ||||||||||| |||||||||||| |||| ||
Sbjct: 621  tcaggttgccgatgggagacagtgnccagttcgctgcctatatagaggaggtcgagcaaa 562

                                                                        
Query: 3325 gttaagccagggttggtttgaatttgcattagataacaatttaggtgaaggtgatgtctg 3384
            ||||||||||||||||||||||||  | ||||| ||| ||||||| ||||| ||||||||
Sbjct: 561  gttaagccagggttggtttgaattccccttagagaaccatttaggggaaggggatgtctg 502

                                                                        
Query: 3385 tgtgtttgagctccttaaagtgaaggatgtggcgctgcaagttactctatttcgtgtcac 3444
            |||||||||||| || | |  || |||||| | ||||||||||||| |||||||| | ||
Sbjct: 501  tgtgtttgagctgctcagaacgagggatgtagtgctgcaagttactttatttcgtttaac 442

                              
Query: 3445 tgaagatgtgggattgtt 3462
            |||||| ||||| |||||
Sbjct: 441  tgaagaagtggggttgtt 424


>BP073030  GNf077a08;
          Length = 333

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 1433 ctgtcgcggatgacccccaaaaatgaaatccc 1464
            |||||||||||||||||| |||||||||||||
Sbjct: 72   ctgtcgcggatgaccccctaaaatgaaatccc 103



 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 63/74 (85%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1498 atagcgggatttcacggccccaatcccatcgcggcaggggtctgctacgcggcggcgcta 1557
            ||||||||||||||| ||| |||| ||||| |||||| |||| ||||| ||  |||||||
Sbjct: 135  atagcgggatttcac-gccgcaattccatcacggcagaggtccgctacacgatggcgcta 193

                          
Query: 1558 tagagccgctatcg 1571
            ||| ||| ||||||
Sbjct: 194  tagcgccactatcg 207