Miyakogusa Predicted Gene

chr3.CM0792.150.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.CM0792.150.nd
         (6243 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC016915A_C01 KMC016915A_c01                                         880   0.0  

>KMC016915A_C01 KMC016915A_c01;
          Length = 579

 Score =  880 bits (444), Expect = 0.0
 Identities = 469/476 (98%), Gaps = 1/476 (0%)
 Strand = Plus / Minus

                                                                        
Query: 5522 cgtcgacgccgtgaagagagacgacacagaagggaagaacgtcgtgcagagaagctgaag 5581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475  cgtcgacgccgtgaagagagacgacacagaagggaagaacgtcgtgcagagaagctgaag 416

                                                                        
Query: 5582 ctgaagagtaaaacagactacatttcagatgatgaggaagctgagcgaatggatgaccat 5641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415  ctgaagagtaaaacagactacatttcagatgatgaggaagctgagcgaatggatgaccat 356

                                                                        
Query: 5642 ccaagtaataatgaggagacacaagttgatccaaagaagcttgagattgagctacggaat 5701
            || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 355  cccagtaataatgaggagacacaagttgatcccaagaagcttgagattgagctacggaat 296

                                                                        
Query: 5702 aaggctcttgaatccctcaaagcaaagaggggcctgaataactgatcaatacacttttga 5761
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 295  aaggctcttgaatccctcaaagccaagaggggcctgaataactgatcaatacacttttga 236

                                                                        
Query: 5762 gtttttatgttttatgctttagaagcttctttgagaaatatcttcttagcttcttttgaa 5821
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235  gtttttatgttttatgctttagaagcttctttgagaaatatcttcttagcttcttttgaa 176

                                                                        
Query: 5822 aacttggttttacaaatgttatgttttttgttttattggtaaatgtttgatgtcgtctat 5881
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175  aacttggttttaccaatgttatgttttttgttttattggtaaatgtttgatgtcgtctat 116

                                                                        
Query: 5882 ctttaatgctggcagctgaaatggataaatgacgatttctgagcaaatctgttgagtaca 5941
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 115  ctttaatgctggcagctgaaatggataaatgacgatttctgagccaatctgttgagtac- 57

                                                                    
Query: 5942 actctatgcagacattgccatatatttactggtaatatttgtctcccctttgttgg 5997
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56   actctatgcagaccttgccatatatttactggtaatatttgtctcccctttgttgg 1



 Score = 79.8 bits (40), Expect = 6e-14
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                    
Query: 5418 tcgtgtcttctgatgaaagttatagtgatgattctgagtt 5457
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 579  tcgtgtcttctgatgaaagttatagtgatgattctgagtt 540