Miyakogusa Predicted Gene

chr3.CM0634.20.nc
Show Alignment: 

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.CM0634.20.nc
         (23,110 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC006286A_C01 KMC006286A_c01                                         670   0.0  

>KMC006286A_C01 KMC006286A_c01;
          Length = 567

 Score =  670 bits (338), Expect = 0.0
 Identities = 338/338 (100%)
 Strand = Plus / Minus

                                                                         
Query: 22474 agaatcgcatgtatagcttctggaacagatctttcataagatgcgcgccagagatcgaaa 22533
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338   agaatcgcatgtatagcttctggaacagatctttcataagatgcgcgccagagatcgaaa 279

                                                                         
Query: 22534 aactatttgaatcactatttgaatcagtctcaagatcttgtggaggtccaaaaccagtgg 22593
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278   aactatttgaatcactatttgaatcagtctcaagatcttgtggaggtccaaaaccagtgg 219

                                                                         
Query: 22594 atgagtctggatgggtctgactgtgatcctgcttgttgattttgtattgaccattttaaa 22653
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218   atgagtctggatgggtctgactgtgatcctgcttgttgattttgtattgaccattttaaa 159

                                                                         
Query: 22654 tggcgctatgtacactcaattgttgatccaacataccttgtgtgtagattactctttgta 22713
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158   tggcgctatgtacactcaattgttgatccaacataccttgtgtgtagattactctttgta 99

                                                                         
Query: 22714 aatggaattttcttttaactttcgtaagttgtatacattaccttgtatttcttaatgtca 22773
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98    aatggaattttcttttaactttcgtaagttgtatacattaccttgtatttcttaatgtca 39

                                                   
Query: 22774 gatgatagcttttaatgaagttagaaagcttattgtct 22811
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 38    gatgatagcttttaatgaagttagaaagcttattgtct 1



 Score =  244 bits (123), Expect = 6e-63
 Identities = 128/130 (98%)
 Strand = Plus / Minus

                                                                         
Query: 21990 attgtggacttggacacggaagggcgttaccttttcctaaatgctattgctaaccaactg 22049
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 567   attgtggacttggacacggaagggcgttaccttttcctaaatgctattgctaaccnactg 508

                                                                         
Query: 22050 cgttatcccaatactcacacacactacttttccttcatcctgctccatttgtttgcagag 22109
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507   cgttatcccgatactcacacacactacttttccttcatcctgctccatttgtttgcagag 448

                       
Query: 22110 tctaaccagg 22119
             ||||||||||
Sbjct: 447   tctaaccagg 438



 Score =  208 bits (105), Expect = 3e-52
 Identities = 105/105 (100%)
 Strand = Plus / Minus

                                                                         
Query: 22268 caggaaattatccaagaacaaattacaagagtcgtgttagaacgcttaattgttaatcga 22327
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441   caggaaattatccaagaacaaattacaagagtcgtgttagaacgcttaattgttaatcga 382

                                                          
Query: 22328 cctcatccttggggtctcctggttacttttattgagctggtcaag 22372
             |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381   cctcatccttggggtctcctggttacttttattgagctggtcaag 337