Miyakogusa Predicted Gene
- chr3.CM0282.1080.nc
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr3.CM0282.1080.nc
(6163 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMC003316A_C01 KMC003316A_c01 234 2e-60
KMC011601A_C01 KMC011601A_c01 96 1e-18
AV779789 MPDL065a06_f 52 1e-05
>KMC003316A_C01 KMC003316A_c01;
Length = 622
Score = 234 bits (118), Expect = 2e-60
Identities = 121/122 (99%)
Strand = Plus / Minus
Query: 5299 ggaacaaaagagaaacacacagttatgttgaaatttctgcatcacttggcgttgataagc 5358
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggaaccaaagagaaacacacagttatgttgaaatttctgcatcacttggcgttgataagc 402
Query: 5359 catcagatatcttatttgtaactgatgtttttcaagaagctacagctgctaaagcagcag 5418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 catcagatatcttatttgtaactgatgtttttcaagaagctacagctgctaaagcagcag 342
Query: 5419 gt 5420
||
Sbjct: 341 gt 340
Score = 224 bits (113), Expect = 2e-57
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 4923 aggtatacatatattctagtggtagcaggttggcgcaaaggctaatatttggacatacaa 4982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aggtatacatatattctagtggtagcaggttggcgcaaaggctaatatttggacatacaa 513
Query: 4983 accatggggacctaagaaaatatttatctgggttttttgataccacagtgggg 5035
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 accatggggacctaagaaaatatttatctgggttttttgataccacagtgggg 460
Score = 107 bits (54), Expect = 3e-22
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 4469 ttttgatgatgtaccagaagccttggaaaagtggcatgccttgggcataaaggt 4522
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttttgatgatgtaccagaagccttggaaaagtggcatgccttgggcataaaggt 569
>KMC011601A_C01 KMC011601A_c01;
Length = 494
Score = 95.6 bits (48), Expect = 1e-18
Identities = 100/116 (86%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 5306 aagagaaacacacagttatgttgaaatttctgcatcacttggcgttgataagccatcaga 5365
|||||| |||| ||||| |||||||||||| |||||||| ||||||||| | |||||
Sbjct: 466 aagagagacacgaagttacgttgaaatttctcagtcacttggtgttgataagtcgtcaga 407
Query: 5366 tatcttatttgtaactgatgtttttcaagaag-ctacagctgctaaagcagcaggt 5420
||| ||||| || |||||||| |||||||||| ||||||||||||| |||||||||
Sbjct: 406 tattttattcgtcactgatgtgtttcaagaagcctacagctgctaaggcagcaggt 351
>AV779789 MPDL065a06_f;
Length = 560
Score = 52.0 bits (26), Expect = 1e-05
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 6118 taaaccccacattagaatctcatacttccaatgtgagactcaagtc 6163
||||||| |||||||||||||||||| || |||| ||||||||||
Sbjct: 466 taaacccgacattagaatctcatactgtcagtgtgggactcaagtc 511