Miyakogusa Predicted Gene

chr3.CM0279.130.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.CM0279.130.nd
         (7760 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC009856A_C01 KMC009856A_c01                                         979   0.0  
KMC001380A_C01 KMC001380A_c01                                          46   0.001

>KMC009856A_C01 KMC009856A_c01;
          Length = 521

 Score =  979 bits (494), Expect = 0.0
 Identities = 512/521 (98%)
 Strand = Plus / Minus

                                                                        
Query: 6953 aaaacttctggagcacttacaattttacaaatctatttttgttggcttggagttgggttt 7012
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 521  aaaacttctggagcacttacnattttacaaatctatttttgttggcttggagttgggttt 462

                                                                        
Query: 7013 tcttctatctatgtatgactccaatttgcaacttctgttacctagaaggagacattgctc 7072
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 461  tcttctatctatgtatgactccnatttgcaacttctgttacctagaaggagacattgctc 402

                                                                        
Query: 7073 ccaagnnnnnnnataaaaccattgtgatgtaataaggcattcaatttaatggtgcagctt 7132
            |||||       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401  ccaagtttttttataaaaccattgtgatgtaataaggcattcaatttaatggtgcagctt 342

                                                                        
Query: 7133 attagattagattgttattggctgtggaaggttcttgctgcttgacatgtttcttgcagg 7192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341  attagattagattgttattggctgtggaaggttcttgctgcttgacatgtttcttgcagg 282

                                                                        
Query: 7193 gtgaacggttgacttcgagccagaaattactagcacgcaactcgtatgtaagaagccgtg 7252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281  gtgaacggttgacttcgagccagaaattactagcacgcaactcgtatgtaagaagccgtg 222

                                                                        
Query: 7253 gaaaacgctaagaccttcaggaagttgtcatgagtttcagtcgagctgtttctccagaat 7312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221  gaaaacgctaagaccttcaggaagttgtcatgagtttcagtcgagctgtttctccagaat 162

                                                                        
Query: 7313 gagtattattttatacatcccaaatcaggttgtgcttttaatctaatgactatccaattt 7372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161  gagtattattttatacatcccaaatcaggttgtgcttttaatctaatgactatccaattt 102

                                                                        
Query: 7373 tttccctttcgaaagtaagttttgttgctataatgtttgccattgttctattagattttg 7432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101  tttccctttcgaaagtaagttttgttgctataatgtttgccattgttctattagattttg 42

                                                     
Query: 7433 gattggtattcattagttcaataaaagtatatcattgtacc 7473
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 41   gattggtattcattagttcaataaaagtatatcattgtacc 1


>KMC001380A_C01 KMC001380A_c01;
          Length = 670

 Score = 46.1 bits (23), Expect = 0.001
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 5640 gcactttgtggctggcagctgactttggatgctctggat 5678
            |||||||| || |||||| |||||||||||||| |||||
Sbjct: 641  gcactttgcgggtggcagatgactttggatgctttggat 603