Miyakogusa Predicted Gene

chr3.CM0243.200.nc
Show Alignment: 

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.CM0243.200.nc
         (4849 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV766407  MWM104a09_f                                                1124   0.0  

>AV766407  MWM104a09_f;
          Length = 574

 Score = 1124 bits (567), Expect = 0.0
 Identities = 570/571 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3986 ctctctgatgattgatagattgcaccattacataagagagcttcgcttgctcaggaagac 4045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574  ctctctgatgattgatagattgcaccattacataagagagcttcgcttgctcaggaagac 515

                                                                        
Query: 4046 catggaagctgttaagaaacaaagcaggagttttgatgatgataaaaatggcaatgcaga 4105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514  catggaagctgttaagaaacaaagcaggagttttgatgatgataaaaatggcaatgcaga 455

                                                                        
Query: 4106 ggagcataaggcattggcagaagaaatcatggcattgaagtctaaagttaagaaactgga 4165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454  ggagcataaggcattggcagaagaaatcatggcattgaagtctaaagttaagaaactgga 395

                                                                        
Query: 4166 atctgaatgtgaggtgaaaggtaataaggctaagactttggaaactgaagtagaggctct 4225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394  atctgaatgtgaggtgaaaggtaataaggctaagactttggaaactgaagtagaggctct 335

                                                                        
Query: 4226 taagaagcagtctgaggggttccttatggaatatgatcgcctcttggaagacaatcagaa 4285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334  taagaagcagtctgaggggttccttatggaatatgatcgcctcttggaagacaatcagaa 275

                                                                        
Query: 4286 tctccggaatcaattgaacaccattgaccatagcactttgaatcttgataacaaaaagag 4345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274  tctccggaatcaattgaacaccattgaccatagcactttgaatcttgataacaaaaagag 215

                                                                        
Query: 4346 catgtgaaggtttatgtttctggaaaaacaattttctctttgtttcaactgctgtttgag 4405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214  catgtgaaggtttatgtttctggaaaaacaattttctctttgtttcaactgctgtttgag 155

                                                                        
Query: 4406 atttacatgttttcttaataggttgcagttgtaaatttgaagtatctaaaagcagagatg 4465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154  atttacatgttttcttaataggttgcagttgtaaatttgaagtatctaaaagcagagatg 95

                                                                        
Query: 4466 agctatgtggatttagtgaacttactgtactttaaagcacctcagatattgttgacaatg 4525
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 94   agctatgtggatttagtgaacttactgtaccttaaagcacctcagatattgttgacaatg 35

                                           
Query: 4526 ttaagtaatataggaatggatagttattccc 4556
            |||||||||||||||||||||||||||||||
Sbjct: 34   ttaagtaatataggaatggatagttattccc 4