Miyakogusa Predicted Gene
- chr3.CM0111.570.nd
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr3.CM0111.570.nd
(1327 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMC000544A_C10 KMC000544A_c10 337 3e-92
BP072079 GNf063h05 161 4e-39
>KMC000544A_C10 KMC000544A_c10;
Length = 881
Score = 337 bits (170), Expect = 3e-92
Identities = 244/271 (90%), Gaps = 2/271 (0%)
Strand = Plus / Plus
Query: 51 atactccc-ccggtcctatttataagcatgaaagagaagaaaaatcttggtcctttttat 109
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 204 atactccctccggtcctatttataagcatgaaagagaagaaaaacattggtcctttttat 263
Query: 110 aagaaccaaatgaaagtttgagctatattaattannnnnnnncaatgatgcccttattaa 169
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 aagaaccaaatgaaagtttgagctatattaattaattttttccaatgatgcccttattaa 323
Query: 170 ttctaacttgtaaaatgtgtctcattaattattctctctctttctcactttccaacatta 229
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||
Sbjct: 324 ttctaacttgtaaaatgtgtttcattaattattctctctctttcccactttccaacacta 383
Query: 230 ataacaaagggtaattttggaag-nnnnnnngattcaagacatatttaatgtattttacc 288
||||||||||||||||||||||| |||| |||||| |||||||| |||||| |
Sbjct: 384 ataacaaagggtaattttggaagtttattttgatttaagacaaatttaatgcattttatc 443
Query: 289 tagtttaactacatttcttaaactatgtgaa 319
|| ||||||||||||||||||||||||||||
Sbjct: 444 tactttaactacatttcttaaactatgtgaa 474
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 331 gcttataaataggaccggagggagta 356
||||||||||||||||||||||||||
Sbjct: 230 gcttataaataggaccggagggagta 205
>BP072079 GNf063h05;
Length = 169
Score = 161 bits (81), Expect = 4e-39
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 98 ggtcctttttataagaaccaaatgaaagtttgagctatattaattannnnnnnncaatga 157
||||||||||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 169 ggtcctttttataagaacccaatgaaagtttgagctatattaattatttttttcccatga 110
Query: 158 tgcccttattaattc-taacttgtaaaatgtgtctcattaattattctctctctttctca 216
|||||||||| |||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 109 tgcccttatttattcctagcttgtaaaatgtgtctcattaattattctctctctttcccc 50
Query: 217 ctttccaac-attaataacaaagggtaattttggaag 252
|||||| || | ||||||| |||||||||||||||||
Sbjct: 49 ctttcccacaactaataaccaagggtaattttggaag 13