Miyakogusa Predicted Gene
- chr3.CM0111.220.nc
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr3.CM0111.220.nc
(3759 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMC001102A_C01 KMC001102A_c01 1209 0.0
BP066574 GENLf078a12 539 e-152
KMC000943A_C01 KMC000943A_c01 48 1e-04
>KMC001102A_C01 KMC001102A_c01;
Length = 1142
Score = 1209 bits (610), Expect = 0.0
Identities = 638/652 (97%)
Strand = Plus / Minus
Query: 3108 aggtggacattcaagaaagcccgacaattgcaaccgctgagaacgttagggttgtaccaa 3167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 aggtggacattcaagaaagcccgacaattgcaaccgctgagaacgttagggttgtaccaa 1063
Query: 3168 ccttcaagatatacaaaaatggcagtagagtgaaggaaatcatttgccctagtcgcgaca 3227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 ccttcaagatatacaaaaatggcagtagagtgaaggaaatcatttgccctagtcgcgaca 1003
Query: 3228 tattggaacacactgtgaggcattacagctcttagcactcatgacttgtaattcttcttc 3287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tattggaacacactgtgaggcattacagctcttagcactcatgacttgtaattcttcttc 943
Query: 3288 tgtgttgtttgttgtcttgtgcaattccttcttacagttaaacacaacactctagtctcc 3347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tgtgttgtttgttgtcttgtgcaattccttcttacagttaaacacaacactctagtctcc 883
Query: 3348 ctccacagttcttccagtcttttgagatcccaccataaaatcttcgcatgatacctgtga 3407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ctccacagttcttccagtcttttgagatcccaccataaaatcttcgcatgatacctgtga 823
Query: 3408 catagtcaaaatccagataataatcgtgttagcatccaatgccattggaaccaaagagat 3467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 catagtcaaaatccagataataatcgtgttagcatccaatgccattggaaccaaagagat 763
Query: 3468 agtccagtcccttttggtgtttttatttattcattcattccccattgctctttggttcca 3527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 agtccagtcccttttggtgtttttatttattcattcattccccattgctctttggttcca 703
Query: 3528 tgttcttcctccctactccctttgtcaattttcttttcctctactctactccttttcagt 3587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tgttcttcctccctactccctttgtcaattttcttttcctctactctactccttttcagt 643
Query: 3588 tcactaggccagctagctgttcttgtaccaccagtttcttttcaaggttnnnnnnnnnnn 3647
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tcactaggccagctagctgttcttgtaccaccagtttcttttcaaggttaaaaagaaaaa 583
Query: 3648 nnntgtttttatgtctgtacaatttatttgattatcagtttaaattaccttctacaatag 3707
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aaatgtttttatgtctgtacaatttatttgattatcagtttaaattaccttctacaatag 523
Query: 3708 acaggtatagacaggtatatataacacaagggaaagggaggttattctgttg 3759
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 acaggtatagacaggtatatataacacaagggaaagggaggttattctgttg 471
>BP066574 GENLf078a12;
Length = 473
Score = 539 bits (272), Expect = e-152
Identities = 272/272 (100%)
Strand = Plus / Plus
Query: 444 actccactcgctctaactctaactttctgtttgtttcccgagaaaatcaaaataacaatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 actccactcgctctaactctaactttctgtttgtttcccgagaaaatcaaaataacaatg 261
Query: 504 tcgcattcctcgggaaaacccgtttccgacgtcatcgggttcaacaaaccggatttccga 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcgcattcctcgggaaaacccgtttccgacgtcatcgggttcaacaaaccggatttccga 321
Query: 564 gagctcgatctaggttcccccgtttcgccattgcgaacgcgcggacccgccgccgccagc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gagctcgatctaggttcccccgtttcgccattgcgaacgcgcggacccgccgccgccagc 381
Query: 624 agcagttctggctcatccggatcgttctccggtggtcgaaacccggttcctagaagatcc 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agcagttctggctcatccggatcgttctccggtggtcgaaacccggttcctagaagatcc 441
Query: 684 gattccggcgagctttctggctccagcgagaa 715
||||||||||||||||||||||||||||||||
Sbjct: 442 gattccggcgagctttctggctccagcgagaa 473
Score = 190 bits (96), Expect = 1e-47
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 283 agaaacaaagaaaagctttattctctctctaagaattcattcattctttacttgctcact 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 agaaacaaagaaaagctttattctctctctaagaattcattcattctttacttgctcact 100
Query: 343 cattttatatcacgagatccccatcccatcccatcc 378
||||||||||||||||||||||||||||||||||||
Sbjct: 101 cattttatatcacgagatccccatcccatcccatcc 136
>KMC000943A_C01 KMC000943A_c01;
Length = 586
Score = 48.1 bits (24), Expect = 1e-04
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3376 cccaccataaaatcttcgcatgatacctgtgacatagtca 3415
||||||||||||| || | ||||||||||||||||||||
Sbjct: 553 cccaccataaaatgatctcctgatacctgtgacatagtca 514