Miyakogusa Predicted Gene

chr2.LjT41P23.50.nc
Show Alignment:  
BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.LjT41P23.50.nc
         (7382 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BP070178  GNf038g09                                                   722   0.0  
BP048398  SPD055f05_f                                                  48   2e-04

>BP070178  GNf038g09;
          Length = 385

 Score =  722 bits (364), Expect = 0.0
 Identities = 378/385 (98%)
 Strand = Plus / Minus

                                                                        
Query: 6834 tgacgacgcccaacagagtgggcagacagaggctgtgcagggtggtcattaggatcacac 6893
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385  tgacgacgcccaacagagtgggcagacagaggctgtgcagggtggtcattaggatcacac 326

                                                                        
Query: 6894 gccgcgtttctggaagataatctaacttaatagcaagagcgcgatcgtgttttggatagc 6953
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325  gccgcgtttctggaagataatctaacttaatagcaagagcgcgatcgtgttttggatagc 266

                                                                        
Query: 6954 ttgtagttcaaattgtattagagctgaccatttagtcttcggatctgtttatgttacatg 7013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265  ttgtagttcaaattgtattagagctgaccatttagtcttcggatctgtttatgttacatg 206

                                                                        
Query: 7014 atccatcattcctaatgtggnnnnnnnccgtccccattcaagacaacctggatcgtatgt 7073
            ||||||||||||||||||||       |||||||||||||||||||||||||||||||||
Sbjct: 205  atccatcattcctaatgtggtttttttccgtccccattcaagacaacctggatcgtatgt 146

                                                                        
Query: 7074 agtgtgtgaattctgtgtcacgccttatctgcatcttccaagttagtgttcaagtttagc 7133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145  agtgtgtgaattctgtgtcacgccttatctgcatcttccaagttagtgttcaagtttagc 86

                                                                        
Query: 7134 aatgtagttaatgaacttgggtgttgtccattatataatttcctgtacaaatattttatc 7193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85   aatgtagttaatgaacttgggtgttgtccattatataatttcctgtacaaatattttatc 26

                                     
Query: 7194 gtgaaaataaagaaaaggagtatca 7218
            |||||||||||||||||||||||||
Sbjct: 25   gtgaaaataaagaaaaggagtatca 1


>BP048398  SPD055f05_f;
          Length = 582

 Score = 48.1 bits (24), Expect = 2e-04
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 6347 taaaagtgagatgaaagtgaagtaatttatgcttggata 6385
            |||||||||  |||||||||||||||||||  |||||||
Sbjct: 575  taaaagtgatntgaaagtgaagtaatttatctttggata 537