Miyakogusa Predicted Gene

chr2.CM0021.1090.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.CM0021.1090.nc
         (11,160 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BP064214  GENLf036a11                                                  76   2e-12
KMC021317A_C01 KMC021317A_c01                                          68   4e-10
BP055633  SPDL058d09_f                                                 64   6e-09

>BP064214  GENLf036a11;
          Length = 534

 Score = 75.8 bits (38), Expect = 2e-12
 Identities = 69/78 (88%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                         
Query: 10835 ctctcccaagtcccaatttcccaaa-tgttcacaaagatacctaaaccctcttcacactc 10893
             |||| ||||||||||||| || ||| || ||  ||||||||||||| |||||||||||||
Sbjct: 134   ctcttccaagtcccaattgcctaaagtgatccaaaagatacctaaaacctcttcacactc 193

                               
Query: 10894 ccttatttataggctaag 10911
             ||||| ||||||||||||
Sbjct: 194   ccttaattataggctaag 211


>KMC021317A_C01 KMC021317A_c01;
          Length = 550

 Score = 67.9 bits (34), Expect = 4e-10
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                               
Query: 10995 cccccctaaacatccaccttgtcctcaaggtggg 11028
             ||||||||||||||||||||||||||||||||||
Sbjct: 83    cccccctaaacatccaccttgtcctcaaggtggg 50



 Score = 58.0 bits (29), Expect = 4e-07
 Identities = 78/93 (83%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                         
Query: 10818 attcgagagactcatcactctcccaagtcccaatttcccaaatgttcac-aaagatacct 10876
             ||||||||| |||  | ||||||||||||||||||||| ||||| || | |||||| |||
Sbjct: 242   attcgagaggctctgctctctcccaagtcccaatttcctaaatgatcccaaaagatgcct 183

                                              
Query: 10877 aaaccctcttcacactcccttatttataggcta 10909
             |||| ||| |  || |||||||||| |||||||
Sbjct: 182   aaactctcctagcaatcccttatttgtaggcta 150


>BP055633  SPDL058d09_f;
          Length = 528

 Score = 63.9 bits (32), Expect = 6e-09
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 10766 tgatggaaccctgatattattcaaccaagaaatgtacaagaaacagat 10813
             ||||| |||||||||||||||||||  | |||||||||||||||||||
Sbjct: 106   tgatgaaaccctgatattattcaacagaaaaatgtacaagaaacagat 153