Miyakogusa Predicted Gene
- chr1.CM0955.30.nd
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr1.CM0955.30.nd
(2591 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMC005960A_C01 KMC005960A_c01 1047 0.0
BP075081 GNLf005d11 68 9e-11
KMC002840A_C01 KMC002840A_c01 68 9e-11
>KMC005960A_C01 KMC005960A_c01;
Length = 532
Score = 1047 bits (528), Expect = 0.0
Identities = 531/532 (99%)
Strand = Plus / Minus
Query: 1772 ctcttggtaaagttgcacataatgcacatgcttctttccctccctcagtttcctatcaac 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctcttggtaaagttgcacataatgcacatgcttctttccctccctcagtttcctatcaac 473
Query: 1832 ctcctcttcctgctcctaggtcaaatattgaggtgcatcatggtccaggggtagttcctt 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctcctcttcctgctcctaggtcaaatattgaggtgcatcatggtccaggggtagttcctt 413
Query: 1892 ctcctttcaccttacaaccaaatgcttctggcggttcttttattccttctgtacaatctg 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctcctttcaccttacaaccaaatgcttctggcggttcttttattccttctgtacaatctg 353
Query: 1952 gtattgtttcatttcaaagtttccggggtggtgttgagtcattacatcaagaagcactag 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gtattgtttcatttcaaagtttccggggtggtgttgagtcattacatcaagaagcactag 293
Query: 2012 ctccaaatccttggggtggatcattcccaccatcctcattagggccaaaatctccaatga 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctccaaatccttggggtggatcattcccaccatcctcattagggccaaaatctccaatga 233
Query: 2072 agaggccataccaccgcatatgacagtagtcatttggatctaactggggttgttttgtac 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 agaggccataccaccgcatatgacagtagtcatttggatctaactggggttgttttgtac 173
Query: 2132 atgtatttgtcttgtaaaattaagatacatttagtcatttacagatagtttacaaataga 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atgtatttgtcttgtaaaattaagatacatttagtcatttacagatagtttacaaataga 113
Query: 2192 acaattcttttgtaattcacatttggtccaacatgaacttttggtgggtgagcccaattg 2251
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 112 acaattcttttgtaattcacatttggtccaacatgaacttttggtgggtgagccccattg 53
Query: 2252 gacctaattttattatcagttcaaattattaaatcttgaattatcattctcg 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gacctaattttattatcagttcaaattattaaatcttgaattatcattctcg 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 2543 tccttctcctttcaccttacagccaatagcttcaggcaattcttttatt 2591
||||||||||||||||||||| |||| ||||| ||| ||||||||||
Sbjct: 417 tccttctcctttcaccttacaaccaaatgcttctggcggttcttttatt 369
>BP075081 GNLf005d11;
Length = 474
Score = 67.9 bits (34), Expect = 9e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 2262 tattatcagttcaaattattaaatcttgaattatcatt 2299
|||||| |||||||||||||||||||||||||||||||
Sbjct: 182 tattattagttcaaattattaaatcttgaattatcatt 145
>KMC002840A_C01 KMC002840A_c01;
Length = 517
Score = 67.9 bits (34), Expect = 9e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 2262 tattatcagttcaaattattaaatcttgaattatcatt 2299
|||||| |||||||||||||||||||||||||||||||
Sbjct: 165 tattattagttcaaattattaaatcttgaattatcatt 128
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1864 gtgcatcatggtccaggggtagttccttctcctttcaccttacaacc 1910
|||||| |||||| |||| |||||||||||||||||||| ||||||
Sbjct: 479 gtgcataatggtctagggacagttccttctcctttcacctcacaacc 433
Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 1975 cggggtggtgttgagtcattacatcaagaagcactagctccaa 2017
|||||||||||| ||||||| ||||||||||| | |||||||
Sbjct: 395 cggggtggtgttcagtcattgaatcaagaagcagtggctccaa 353