Miyakogusa Predicted Gene
- chr4.CM0617.290.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM0617.290.nd - phase: 2 /partial
(237 letters)
Database: trembl
6,964,485 sequences; 2,268,126,488 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A5ADW8_VITVI (tr|A5ADW8) Putative uncharacterized protein OS=Vit... 70 1e-10
B3H5R1_ARATH (tr|B3H5R1) Uncharacterized protein At5g48240.1 OS=... 66 2e-09
Q9LUB0_ARATH (tr|Q9LUB0) Genomic DNA, chromosome 5, P1 clone:MIF... 66 2e-09
B6EUA7_ARATH (tr|B6EUA7) Putative uncharacterized protein At5g48... 66 2e-09
A7Q2X0_VITVI (tr|A7Q2X0) Chromosome chr12 scaffold_47, whole gen... 65 5e-09
A3CAC1_ORYSJ (tr|A3CAC1) Putative uncharacterized protein OS=Ory... 60 2e-07
Q53LZ3_ORYSJ (tr|Q53LZ3) Transposon protein, putative, unclassif... 59 3e-07
A2ZD80_ORYSI (tr|A2ZD80) Putative uncharacterized protein OS=Ory... 59 3e-07
B4FYQ9_MAIZE (tr|B4FYQ9) Putative uncharacterized protein OS=Zea... 56 2e-06
>A5ADW8_VITVI (tr|A5ADW8) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_037473 PE=4 SV=1
Length = 240
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 13/125 (10%)
Query: 88 MKKLYHKRAREYNSDDDEEDETAVPATTRPRRMTSIKYEKNEVDDIENEDLSDDEGAAGG 147
MKKL+ KRAR+YNSDDDE++ + ++ K ++ +D S++E
Sbjct: 1 MKKLFRKRARDYNSDDDEDEGDDGGYAVATKGENAVPIIKEVA--LDGKDSSEEE--EDH 56
Query: 148 EKVKNKNVTFMKNHNYEGEEEDDGEILPGITKFTEGCKAFKLAFMSIVKKSVSDDLLNPI 207
+ + N E E+++GEI PGITK TEGC+AF+LAF I+KK+VSD L P+
Sbjct: 57 QDIDEAN---------EISEDEEGEIQPGITKLTEGCRAFRLAFKKIIKKNVSDVSLGPV 107
Query: 208 LSANK 212
LS +K
Sbjct: 108 LSGHK 112
>B3H5R1_ARATH (tr|B3H5R1) Uncharacterized protein At5g48240.1 OS=Arabidopsis
thaliana GN=At5g48240 PE=4 SV=1
Length = 309
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 30/179 (16%)
Query: 40 ADETQLMEPGRDPRKRKF-VKNQRHKNSKLRPKGKPAQHGQKKVKVNQEMKKLYHKRARE 98
+E + R RKR+ VK + K KP+ + KV + +KL+ KRAR+
Sbjct: 4 GEEGHMAMADRGSRKRRVGVKKGTKAARNKKQKSKPST--SDRFKVTMKNQKLFQKRARD 61
Query: 99 YNSDDDEEDETAV---PATTRPRRMTSIKYEKNEVDDIENEDLSDDEGAAGGEKVKNKNV 155
YNSDDDEE++ P T ++ S ++I ED +DE + G
Sbjct: 62 YNSDDDEEEDDESKKQPEVTIREKIFSDANMGPNYEEIGEED--NDENSDG--------- 110
Query: 156 TFMKNHNYEGEEEDDGEILPGITKF-TEGCKAFKLAFMSIVKKSVSDDLLNPILSANKN 213
ED GEI GITKF T+GC AFK+AF +I+KK+ DD L P+LSA+K+
Sbjct: 111 ------------EDHGEIESGITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKH 157
>Q9LUB0_ARATH (tr|Q9LUB0) Genomic DNA, chromosome 5, P1 clone:MIF21
OS=Arabidopsis thaliana GN=At5g48240 PE=4 SV=1
Length = 339
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 30/179 (16%)
Query: 40 ADETQLMEPGRDPRKRKF-VKNQRHKNSKLRPKGKPAQHGQKKVKVNQEMKKLYHKRARE 98
+E + R RKR+ VK + K KP+ + KV + +KL+ KRAR+
Sbjct: 4 GEEGHMAMADRGSRKRRVGVKKGTKAARNKKQKSKPST--SDRFKVTMKNQKLFQKRARD 61
Query: 99 YNSDDDEEDETAV---PATTRPRRMTSIKYEKNEVDDIENEDLSDDEGAAGGEKVKNKNV 155
YNSDDDEE++ P T ++ S ++I ED +DE + G
Sbjct: 62 YNSDDDEEEDDESKKQPEVTIREKIFSDANMGPNYEEIGEED--NDENSDG--------- 110
Query: 156 TFMKNHNYEGEEEDDGEILPGITKF-TEGCKAFKLAFMSIVKKSVSDDLLNPILSANKN 213
ED GEI GITKF T+GC AFK+AF +I+KK+ DD L P+LSA+K+
Sbjct: 111 ------------EDHGEIESGITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKH 157
>B6EUA7_ARATH (tr|B6EUA7) Putative uncharacterized protein At5g48240.2
OS=Arabidopsis thaliana GN=At5g48240 PE=4 SV=1
Length = 290
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 30/179 (16%)
Query: 40 ADETQLMEPGRDPRKRKF-VKNQRHKNSKLRPKGKPAQHGQKKVKVNQEMKKLYHKRARE 98
+E + R RKR+ VK + K KP+ + KV + +KL+ KRAR+
Sbjct: 4 GEEGHMAMADRGSRKRRVGVKKGTKAARNKKQKSKPST--SDRFKVTMKNQKLFQKRARD 61
Query: 99 YNSDDDEEDETAV---PATTRPRRMTSIKYEKNEVDDIENEDLSDDEGAAGGEKVKNKNV 155
YNSDDDEE++ P T ++ S ++I ED +DE + G
Sbjct: 62 YNSDDDEEEDDESKKQPEVTIREKIFSDANMGPNYEEIGEED--NDENSDG--------- 110
Query: 156 TFMKNHNYEGEEEDDGEILPGITKF-TEGCKAFKLAFMSIVKKSVSDDLLNPILSANKN 213
ED GEI GITKF T+GC AFK+AF +I+KK+ DD L P+LSA+K+
Sbjct: 111 ------------EDHGEIESGITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKH 157
>A7Q2X0_VITVI (tr|A7Q2X0) Chromosome chr12 scaffold_47, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00029062001 PE=4
SV=1
Length = 274
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 13/125 (10%)
Query: 88 MKKLYHKRAREYNSDDDEEDETAVPATTRPRRMTSIKYEKNEVDDIENEDLSDDEGAAGG 147
MKKL+ KRAR+YNSDDDE++ + ++ K ++ +D S++E
Sbjct: 1 MKKLFRKRARDYNSDDDEDEGDDGGYAVATKGENAVPIIKEVA--LDGKDSSEEEE---- 54
Query: 148 EKVKNKNVTFMKNHNYEGEEEDDGEILPGITKFTEGCKAFKLAFMSIVKKSVSDDLLNPI 207
++++ + E E+++GEI PGITK TEGC+AF+LAF I+KK+VSD L P+
Sbjct: 55 ---DHQDI----DEENEISEDEEGEIQPGITKLTEGCRAFRLAFKKIIKKNVSDISLGPV 107
Query: 208 LSANK 212
LS +K
Sbjct: 108 LSGHK 112
>A3CAC1_ORYSJ (tr|A3CAC1) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_032243 PE=4 SV=1
Length = 278
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 45/139 (32%)
Query: 74 PAQHGQKKVKVNQEMKKLYHKRAREYNSDDDEEDETAVPATTRPRRMTSIKYEKNEVDDI 133
P +++ K + KL KRAR+YNSDD +++E +
Sbjct: 54 PGDLPRRRSKPSDRFLKLLRKRARDYNSDDSDDEER-----------------------L 90
Query: 134 ENEDLSDDEGAAGGEKVKNKNVTFMKNHNYEGEEEDDGEILPGITKFTEGCKAFKLAFMS 193
+ED ++EGA+G G++E G +T+F +GC+AF++AF
Sbjct: 91 SDED-EEEEGASGS-----------------GDDEAAG----AVTRFEQGCRAFRVAFTK 128
Query: 194 IVKKSVSDDLLNPILSANK 212
I+ K + DD L PILSA+K
Sbjct: 129 IMAKKLPDDPLGPILSAHK 147
>Q53LZ3_ORYSJ (tr|Q53LZ3) Transposon protein, putative, unclassified
(Os11g0266000 protein) (Transposon protein, putative,
unclassified, expressed) OS=Oryza sativa subsp. japonica
GN=Os11g0266000 PE=4 SV=1
Length = 310
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 45/139 (32%)
Query: 74 PAQHGQKKVKVNQEMKKLYHKRAREYNSDDDEEDETAVPATTRPRRMTSIKYEKNEVDDI 133
P +++ K + KL KRAR+YNSDD +++E +
Sbjct: 54 PGDLPRRRSKPSDRFLKLLRKRARDYNSDDSDDEER-----------------------L 90
Query: 134 ENEDLSDDEGAAGGEKVKNKNVTFMKNHNYEGEEEDDGEILPGITKFTEGCKAFKLAFMS 193
+ED ++EGA+G G++E G +T+F +GC+AF++AF
Sbjct: 91 SDED-EEEEGASGS-----------------GDDEAAG----AVTRFEQGCRAFRVAFTK 128
Query: 194 IVKKSVSDDLLNPILSANK 212
I+ K + DD L PILSA+K
Sbjct: 129 IMAKKLPDDPLGPILSAHK 147
>A2ZD80_ORYSI (tr|A2ZD80) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_034523 PE=4 SV=1
Length = 317
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 45/139 (32%)
Query: 74 PAQHGQKKVKVNQEMKKLYHKRAREYNSDDDEEDETAVPATTRPRRMTSIKYEKNEVDDI 133
P +++ K + KL KRAR+YNSDD +++E +
Sbjct: 54 PGDLPRRRSKPSDRFLKLLRKRARDYNSDDSDDEER-----------------------L 90
Query: 134 ENEDLSDDEGAAGGEKVKNKNVTFMKNHNYEGEEEDDGEILPGITKFTEGCKAFKLAFMS 193
+ED ++EGA+G G++E G +T+F +GC+AF++AF
Sbjct: 91 SDED-EEEEGASGS-----------------GDDEAAG----AVTRFEQGCRAFRVAFTK 128
Query: 194 IVKKSVSDDLLNPILSANK 212
I+ K + DD L PILSA+K
Sbjct: 129 IMAKKLPDDPLGPILSAHK 147
>B4FYQ9_MAIZE (tr|B4FYQ9) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 322
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 24/124 (19%)
Query: 90 KLYHKRAREYNSDDDEEDETAVPATTRPRRMTSIKYEKNEVDDIENEDLSDDEGAAGGEK 149
KL KRAR+YNSDD++E R+ + + VD+ ++E LS E G ++
Sbjct: 61 KLLRKRARDYNSDDEDE-------AGDDRQQEHLPNPQRRVDEDDDEALSHSEPEEGEDE 113
Query: 150 VKNKNVTFMKNHNYEGEEEDDGEILPGITKFTEGCKAFKLAFMSIVKKSVSDDLLNPILS 209
+ + + +T+F +GC+AF++AF+ I+ K + DD L PILS
Sbjct: 114 DEEEGASS-----------------SAVTRFEQGCRAFRVAFLKIMAKKLPDDPLGPILS 156
Query: 210 ANKN 213
A+K
Sbjct: 157 AHKT 160