Miyakogusa Predicted Gene
- chr1.CM0955.30.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0955.30.nd + phase: 1 /partial
(297 letters)
Database: trembl
6,964,485 sequences; 2,268,126,488 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A7PKP0_VITVI (tr|A7PKP0) Chromosome chr7 scaffold_20, whole geno... 151 5e-35
B6SH76_MAIZE (tr|B6SH76) Putative uncharacterized protein OS=Zea... 123 2e-26
Q6YYY1_ORYSJ (tr|Q6YYY1) Putative uncharacterized protein P0604E... 120 8e-26
A3BVR7_ORYSJ (tr|A3BVR7) Putative uncharacterized protein OS=Ory... 119 2e-25
A2Z492_ORYSI (tr|A2Z492) Putative uncharacterized protein OS=Ory... 114 7e-24
A3C1Q1_ORYSJ (tr|A3C1Q1) Putative uncharacterized protein OS=Ory... 114 7e-24
Q7Y216_ARATH (tr|Q7Y216) Putative uncharacterized protein At3g45... 112 2e-23
Q9M168_ARATH (tr|Q9M168) Putative uncharacterized protein T6D9_8... 111 5e-23
A2YY46_ORYSI (tr|A2YY46) Putative uncharacterized protein OS=Ory... 110 2e-22
Q652N4_ORYSJ (tr|Q652N4) Putative uncharacterized protein OJ1003... 72 6e-11
A9T2T7_PHYPA (tr|A9T2T7) Predicted protein (Fragment) OS=Physcom... 63 2e-08
A9SX13_PHYPA (tr|A9SX13) Predicted protein OS=Physcomitrella pat... 58 1e-06
A4S2T1_OSTLU (tr|A4S2T1) Predicted protein OS=Ostreococcus lucim... 52 5e-05
>A7PKP0_VITVI (tr|A7PKP0) Chromosome chr7 scaffold_20, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00019256001 PE=4
SV=1
Length = 314
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 104/165 (63%), Gaps = 11/165 (6%)
Query: 6 SVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKTWNRPY 65
+VTKNV + YG+ N+ESL +LF+TLL+KL S+E+LW +G+CAS+Y+GSWI KTW+
Sbjct: 3 TVTKNVINFLGYGEVNKESLAELFVTLLLKLQSIETLWSKGLCASIYDGSWIYKTWDSGV 62
Query: 66 SMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLLFGTHT 125
+EDF DRSQNVARAV + IY+CIH SL ++S F+N +++G +L LFG
Sbjct: 63 GCINVEDFTDRSQNVARAVATKQVTKIYKCIHHSLHWISVFMNGRMEGPKLRRRLFGQDH 122
Query: 126 VSTP-----------GAGGTSNINGNNLPSPENLCPQKKPRLMEG 159
V P G + + N + + ++ KKPRLM+G
Sbjct: 123 VPKPLSGPGQLPVPEDGGKSLDENAASALTQDDFIQTKKPRLMDG 167
>B6SH76_MAIZE (tr|B6SH76) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 690
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 80/121 (66%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G D S+ KNV + +G N+ES+ +LF++L+ KL SVE LW+QG+CAS +EG+WI KT
Sbjct: 270 GTDFASIEKNVSLFQGFGHSNKESIAELFVSLMSKLVSVEGLWEQGLCASNFEGTWISKT 329
Query: 61 WNRPYSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLL 120
W + +EDF+DRSQN AR+VG + + I C+ S+S LS+F +I +L LL
Sbjct: 330 WAKGVGNLNVEDFLDRSQNFARSVGVKEMQKICECLRASVSDLSKFSKGEIAAPKLKALL 389
Query: 121 F 121
F
Sbjct: 390 F 390
>Q6YYY1_ORYSJ (tr|Q6YYY1) Putative uncharacterized protein P0604E01.3
(Os08g0559900 protein) (Putative uncharacterized protein
P0562A06.26) OS=Oryza sativa subsp. japonica
GN=P0604E01.3 PE=4 SV=1
Length = 581
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 79/121 (65%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G D S+ +NV +G +N+ES+ +LF++L+ KL SVE LW+QG+CAS +EGSWI KT
Sbjct: 269 GPDFPSIQRNVSLVEGFGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKT 328
Query: 61 WNRPYSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLL 120
W R +EDF+DRSQN ARAVG + + I CI ++ L+ F +I +L +LL
Sbjct: 329 WERGVGNLSVEDFLDRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLL 388
Query: 121 F 121
F
Sbjct: 389 F 389
>A3BVR7_ORYSJ (tr|A3BVR7) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_027139 PE=4 SV=1
Length = 548
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 79/121 (65%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G D S+ +NV +G +N+ES+ +LF++L+ KL SVE LW+QG+CAS +EGSWI KT
Sbjct: 251 GPDFPSIQRNVSLVEGFGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKT 310
Query: 61 WNRPYSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLL 120
W R +EDF+DRSQN ARAVG + + I CI ++ L+ F +I +L +LL
Sbjct: 311 WERGVGNLSVEDFLDRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLL 370
Query: 121 F 121
F
Sbjct: 371 F 371
>A2Z492_ORYSI (tr|A2Z492) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_031385 PE=4 SV=1
Length = 1170
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G+D SV +N + +G+ N+E++ +LF++L+ KL S ESLW+ G+CAS +E SWI KT
Sbjct: 892 GSDFESVERNTLAFKGFGRTNKETVAELFVSLISKLLSAESLWEHGLCASNFEASWISKT 951
Query: 61 WNRPYSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLL 120
W + +EDF+DRSQN AR+VG + + I RC+ L F+ ++ +L LL
Sbjct: 952 WKKGIGNLNVEDFLDRSQNFARSVGKKEMQKICRCLRDCALNLLDFMRGKLDTSKLKTLL 1011
Query: 121 FG 122
FG
Sbjct: 1012 FG 1013
>A3C1Q1_ORYSJ (tr|A3C1Q1) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_029223 PE=4 SV=1
Length = 1170
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G+D SV +N + +G+ N+E++ +LF++L+ KL S ESLW+ G+CAS +E SWI KT
Sbjct: 892 GSDFESVERNTLAFKGFGRTNKETVAELFVSLISKLLSAESLWEHGLCASNFEASWISKT 951
Query: 61 WNRPYSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLL 120
W + +EDF+DRSQN AR+VG + + I RC+ L F+ ++ +L LL
Sbjct: 952 WKKGIGNLNVEDFLDRSQNFARSVGKKEMQKICRCLRDCALNLLDFMRGKLDTSKLKTLL 1011
Query: 121 FG 122
FG
Sbjct: 1012 FG 1013
>Q7Y216_ARATH (tr|Q7Y216) Putative uncharacterized protein At3g45750
OS=Arabidopsis thaliana GN=At3g45750 PE=2 SV=1
Length = 682
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G D +V K + + N+G++N+ESL +LF T +KL SVE LW+QG+C SV G WI K
Sbjct: 250 GMDPPNVEKRAQKFLNWGQRNQESLGRLFATFFIKLQSVEFLWRQGLCVSVLNGLWISKK 309
Query: 61 WNRP-YSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDL 119
W + +EDF + SQNVAR V A A+ IY I++++ + +FLND++ G +L
Sbjct: 310 WKKVGVGSISVEDFTNISQNVARRVNGAGAKKIYSSINRTVEDIFEFLNDKVAGTDLRHR 369
Query: 120 LFGTHTV 126
LFG +V
Sbjct: 370 LFGKGSV 376
>Q9M168_ARATH (tr|Q9M168) Putative uncharacterized protein T6D9_80 OS=Arabidopsis
thaliana GN=T6D9_80 PE=4 SV=1
Length = 690
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 9/135 (6%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G D +V K + + N+G++N+ESL +LF T +KL SVE LW+QG+C SV G WI K
Sbjct: 250 GMDPPNVEKRAQKFLNWGQRNQESLGRLFATFFIKLQSVEFLWRQGLCVSVLNGLWISKK 309
Query: 61 WNRP---------YSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQI 111
W + + +EDF + SQNVAR V A A+ IY I++++ + +FLND++
Sbjct: 310 WKKVGVGSISVSYKKLYSVEDFTNISQNVARRVNGAGAKKIYSSINRTVEDIFEFLNDKV 369
Query: 112 QGIELMDLLFGTHTV 126
G +L LFG +V
Sbjct: 370 AGTDLRHRLFGKGSV 384
>A2YY46_ORYSI (tr|A2YY46) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_029239 PE=4 SV=1
Length = 565
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVK---------------LASVESLWQQ 45
G D S+ +NV +G +N+ES+ +LF++L+ K L SVE LW+Q
Sbjct: 251 GPDFPSIQRNVSLVEGFGSRNKESVAELFVSLMSKAKLFAYFGVVYTYEKLLSVEGLWEQ 310
Query: 46 GICASVYEGSWILKTWNRPYSMRQIEDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQ 105
G+CAS +EGSWI KTW R +EDF+DRSQN ARAVG + + I CI ++ L+
Sbjct: 311 GLCASNFEGSWIFKTWERGVGNLSVEDFLDRSQNFARAVGKEEMQKISECIRVAVLNLNN 370
Query: 106 FLNDQIQGIELMDLLF 121
F +I +L +LLF
Sbjct: 371 FFRGKIDAPKLKNLLF 386
>Q652N4_ORYSJ (tr|Q652N4) Putative uncharacterized protein OJ1003_C09.37
(Os09g0570600 protein) OS=Oryza sativa subsp. japonica
GN=OJ1003_C09.37 PE=4 SV=1
Length = 310
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 1 GADLVSVTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT 60
G+D SV +N + +G+ N+E++ +LF++L+ KL S ESLW+ G+CAS +E SWI KT
Sbjct: 215 GSDFESVERNTLAFKGFGRTNKETVAELFVSLISKLLSAESLWEHGLCASNFEASWISKT 274
Query: 61 WNR 63
W +
Sbjct: 275 WKK 277
>A9T2T7_PHYPA (tr|A9T2T7) Predicted protein (Fragment) OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_46237 PE=4 SV=1
Length = 172
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 17 YGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKTWNR 63
+G+ N+E+L +LF + K +VESLW+QG+CASVYEG WI K W +
Sbjct: 117 FGRDNKETLGQLFGSFFTKFLAVESLWEQGLCASVYEGKWISKVWAK 163
>A9SX13_PHYPA (tr|A9SX13) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_166963 PE=4 SV=1
Length = 1171
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 17 YGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKT-----WNRP-YSMRQI 70
+G+ N+ S+ +LF++ + ASV+SLW G+ S + G W T WNR Y+MR +
Sbjct: 680 FGQDNKCSIGQLFLSFFGQFASVKSLWVNGLAVSPFWGEWGDSTTTNPAWNRKQYAMR-V 738
Query: 71 EDFMDRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLLF 121
ED DR N AR++ A II + L Q D Q + L LLF
Sbjct: 739 EDPFDRMDNCARSIQDAGLPIICNSFAAAFESLLQ-PPDWDQLLSLRQLLF 788
>A4S2T1_OSTLU (tr|A4S2T1) Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_94724 PE=4 SV=1
Length = 633
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 16 NYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWIL-KTWNRPYSMRQIEDFM 74
+ +N E+L +LF++ L +++ L++ + AS Y G++I+ +W +ED
Sbjct: 230 DIAAENTETLAELFVSFFAHLCAIKDLFRNAVNASTYHGTFIVGSSWQAFKYPLGVEDPF 289
Query: 75 DRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLN--DQIQGIELMDLLFGTHTV------ 126
NVARAV + + + + +S+ L+ D +Q + + L G +V
Sbjct: 290 AAGDNVARAVQMRTRDYVLNAFPAACADISKMLHATDNVQFMRSLLCLLGDKSVPSEVLA 349
Query: 127 ----STPGAGGTSNINGNNLP-------SPENLCPQKKPRLMEGIVENLAKRHSQG---- 171
+ PG GG G LP P + Q L E ++ L ++ + G
Sbjct: 350 RLRPTLPGMGGAPQPPG--LPGAPRPPQGPPVMLQQPAKSLNEHTLDMLGRQVAPGASAE 407
Query: 172 NILAQYLQGKEFQGMGLMQQS 192
ILA + ++ Q QS
Sbjct: 408 EILAMLTRQRQVQAEAQRDQS 428