Miyakogusa Predicted Gene

chr5.CM0260.300.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0260.300.nc - phase: 0 /partial
         (318 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g43840.1                                                       509   e-144
Glyma20g38530.1                                                       503   e-142
Glyma10g05310.1                                                       234   1e-61
Glyma13g19690.1                                                       192   3e-49
Glyma07g00250.1                                                       155   7e-38

>Glyma10g43840.1
          Length = 675

 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 252/308 (81%), Positives = 276/308 (89%), Gaps = 6/308 (1%)

Query: 1   VNSSLAAAQARLSNVKEERDQFEEANNQIVEHLKIKEDELSKSISSCRIEADVIKTWINF 60
           V+++LAAAQARL NV+EERDQFEEANNQIVEHLKIKEDELSKSISSCR+EADVIKTWINF
Sbjct: 372 VSTTLAAAQARLWNVREERDQFEEANNQIVEHLKIKEDELSKSISSCRVEADVIKTWINF 431

Query: 61  LEDTWVLQRSNAEINEKQVNDELERHEDYFVDLAIQLLTAYQKELDPCVNHIETFVVNLK 120
           LEDTWVLQ SNAEIN+KQVNDELERHEDYFV+LAIQLLT YQKEL+PC+NHI+TFVVNLK
Sbjct: 432 LEDTWVLQWSNAEINDKQVNDELERHEDYFVNLAIQLLTTYQKELEPCINHIKTFVVNLK 491

Query: 121 NLSLRLEMSSNADTEDSKVLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFYSQQGKISR 180
           NLS RLEM+ +ADT++S+VLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFY+Q GKISR
Sbjct: 492 NLSQRLEMTPSADTDESEVLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFYAQHGKISR 551

Query: 181 KDEDRVKELFDAIEKIRTQFESIERPVLEIESPSAHTESSLTEKKSDETPSPSAPAQGTP 240
           KDE+RV ELFDAIEK+RTQFESIERP+LEIE P A  E+   EKKSD TPS S PAQG  
Sbjct: 552 KDEERVIELFDAIEKLRTQFESIERPILEIEIP-AKAETPPLEKKSDATPSVSVPAQG-- 608

Query: 241 SPSASARDTDFLKPETDEQPKSSSVSAGQVLDHEAELAKLESEFGKVSHDYSTEEIGDWE 300
              A+A+  +  KPETDEQPKS SV   Q+LDHEAELAKLESEFGKVS DYS EEIGDWE
Sbjct: 609 ---AAAQGIELSKPETDEQPKSPSVKTDQILDHEAELAKLESEFGKVSKDYSAEEIGDWE 665

Query: 301 FDELEREL 308
           FDELEREL
Sbjct: 666 FDELEREL 673


>Glyma20g38530.1
          Length = 677

 Score =  503 bits (1295), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/308 (80%), Positives = 274/308 (88%), Gaps = 11/308 (3%)

Query: 1   VNSSLAAAQARLSNVKEERDQFEEANNQIVEHLKIKEDELSKSISSCRIEADVIKTWINF 60
           V+++LAAAQARL NV+EERDQFEEANNQIVEHLKIKEDELSKS+SSCR+EADVIKTWINF
Sbjct: 379 VSTTLAAAQARLWNVREERDQFEEANNQIVEHLKIKEDELSKSVSSCRVEADVIKTWINF 438

Query: 61  LEDTWVLQRSNAEINEKQVNDELERHEDYFVDLAIQLLTAYQKELDPCVNHIETFVVNLK 120
           LEDTWVLQRSNAE+N+KQVND+LERHEDYFV+LAIQLLT YQKEL PC+NHI TFVVNLK
Sbjct: 439 LEDTWVLQRSNAEMNDKQVNDDLERHEDYFVNLAIQLLTTYQKELGPCINHIGTFVVNLK 498

Query: 121 NLSLRLEMSSNADTEDSKVLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFYSQQGKISR 180
           NLS RLEM+ +ADTE+S+VLSPRRNLEEEYLTYEAKIITTFSVVDN+KQQFY+QQG+ISR
Sbjct: 499 NLSQRLEMTPSADTEESEVLSPRRNLEEEYLTYEAKIITTFSVVDNIKQQFYAQQGRISR 558

Query: 181 KDEDRVKELFDAIEKIRTQFESIERPVLEIESPSAHTESSLTEKKSDETPSPSAPAQGTP 240
           KDE+RVKELF+AIEK+RTQFESIERP+LEIE+P A  E+   +KKSD TPS SAP QG  
Sbjct: 559 KDEERVKELFEAIEKLRTQFESIERPILEIETP-AKAETPPFDKKSDATPSVSAPTQG-- 615

Query: 241 SPSASARDTDFLKPETDEQPKSSSVSAGQVLDHEAELAKLESEFGKVSHDYSTEEIGDWE 300
                    +  KPETDE PKS SV   Q+LDHEAELAKLESEFGKVS DYSTEEIGDWE
Sbjct: 616 --------AELSKPETDELPKSPSVKTDQILDHEAELAKLESEFGKVSQDYSTEEIGDWE 667

Query: 301 FDELEREL 308
           FDELEREL
Sbjct: 668 FDELEREL 675


>Glyma10g05310.1
          Length = 705

 Score =  234 bits (596), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/307 (44%), Positives = 193/307 (62%), Gaps = 26/307 (8%)

Query: 1   VNSSLAAAQARLSNVKEERDQFEEANNQIVEHLKIKEDELSKSISSCRIEADVIKTWINF 60
           VNS L +A+ RL N KEER+QF+EA+ +I+  LK KEDE+ ++I+S  +EA V+  WI F
Sbjct: 420 VNSLLTSARMRLHNAKEEREQFDEASKEIIALLKTKEDEMVRAITSYTVEASVVDAWIKF 479

Query: 61  LEDTWVLQRSNAEINEKQVNDELERHEDYFVDLAIQLLTAYQKELDPCVNHIETFVVNLK 120
           LE TW  Q S+ +  E+QV  ELERH D+FV+L + LL +Y+++L   V  I   V NL+
Sbjct: 480 LESTWDFQASHTKRKEEQVKTELERHGDHFVNLVVHLLYSYKEKLGLSVTQIRILVENLR 539

Query: 121 NLSLRLEMSSNADTEDSKVLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFYSQQGKISR 180
           + S  L +S+ AD E  K++SPR+ LEEEYL  E+K + T ++VD MK+QF+ Q+  I R
Sbjct: 540 S-SQGLAISTAADNEGLKLVSPRKKLEEEYLDIESKFLATLNIVDTMKKQFHIQKEGIFR 598

Query: 181 KDEDRVKELFDAIEKIRTQFESIERPVLEIESPSAHTESSLTEKKSDETPSPSAPAQGTP 240
           KD D+V ELFDAIEKI+ +FESIERP LE+ES +A +          ETPS S     TP
Sbjct: 599 KDIDKVAELFDAIEKIKGEFESIERPKLELESTTARS----------ETPS-SQVTSITP 647

Query: 241 SPSASARDTDFLKPETDEQPKSSSVSAGQVLDHEAELAKLESEFGKVSHDYSTEEIGDWE 300
           SP + A      K + D    S S++           +++  E  K+S D S EEI +WE
Sbjct: 648 SPPSMAN-----KHKQDGLINSPSITGR---------SQIGIELDKLSEDDSEEEICEWE 693

Query: 301 FDELERE 307
           FD L+++
Sbjct: 694 FDALDKD 700


>Glyma13g19690.1
          Length = 250

 Score =  192 bits (489), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/271 (43%), Positives = 165/271 (60%), Gaps = 26/271 (9%)

Query: 37  EDELSKSISSCRIEADVIKTWINFLEDTWVLQRSNAEINEKQVNDELERHEDYFVDLAIQ 96
           EDE+ ++I+S  +EA+V+ TWI FLE TWV Q S+ +  E+QV  ELE + D+FV+L + 
Sbjct: 1   EDEMVRAITSYTVEANVVDTWIKFLESTWVFQASHTKRKEEQVKAELESYGDHFVNLVVH 60

Query: 97  LLTAYQKELDPCVNHIETFVVNLKNLSLRLEMSSNADTEDSKVLSPRRNLEEEYLTYEAK 156
           LL +Y++ L   +  I   V NL++ S  L +SS  D E  K+++PR+NLEEEYL  E++
Sbjct: 61  LLYSYKENLGLSLTQIRILVENLRS-SQGLAISSATDNEGLKLVNPRKNLEEEYLDIESR 119

Query: 157 IITTFSVVDNMKQQFYSQQGKISRKDEDRVKELFDAIEKIRTQFESIERPVLEIESPSAH 216
            + T ++VD MK+QF+ QQ  I RKD D V ELFDAIEKI+ +FESIERP LE+ESP+  
Sbjct: 120 FLATLNIVDTMKKQFHIQQEGIFRKDIDIVTELFDAIEKIKGEFESIERPKLELESPTVR 179

Query: 217 TESSLTEKKSDETPSPSAPAQGTPSPSASARDTDFLKPETDEQPKSSSVSAGQVLDHEAE 276
           +          ETPS S     TPS  + A      K + D    S SV+          
Sbjct: 180 S----------ETPS-SQVTFITPSHPSMAN-----KHKQDGVINSPSVTGR-------- 215

Query: 277 LAKLESEFGKVSHDYSTEEIGDWEFDELERE 307
            +++E E  K+S D S EEI +WEFD  +++
Sbjct: 216 -SQIEIELDKLSEDDSAEEICEWEFDAFDKD 245


>Glyma07g00250.1
          Length = 336

 Score =  155 bits (391), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 88/145 (60%), Positives = 106/145 (73%), Gaps = 13/145 (8%)

Query: 128 MSSNADTEDSKVLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFYSQQGKISRKD----- 182
           M+ +ADT++S+VLS RRNL+EEYLTYEAKIITTFSVVDNMK+QFY+Q  KIS        
Sbjct: 1   MTPSADTDESEVLSLRRNLKEEYLTYEAKIITTFSVVDNMKKQFYAQHRKISSCHCTILS 60

Query: 183 --EDRVKELFDAIEKIRTQFESIERPVLEIESPSAHTESSLTEKKSDETPSPSAPAQGTP 240
             E+RVKELFDAIEK+RTQF+SIERP+LEIE P A  E+   EKK D T S   P QG  
Sbjct: 61  PFEERVKELFDAIEKLRTQFKSIERPILEIEIP-AKVETPPLEKKFDATLSVYVPPQG-- 117

Query: 241 SPSASARDTDFLKPETDEQPKSSSV 265
               +A+  +  KPET+EQPKS S+
Sbjct: 118 ---VAAQGIELSKPETNEQPKSPSI 139