Miyakogusa Predicted Gene

chr5.CM0095.210.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0095.210.nd + phase: 0 /pseudo/partial
         (470 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g07730.1                                                       412   e-115
Glyma16g21980.1                                                        97   3e-20

>Glyma07g07730.1
          Length = 539

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 273/483 (56%), Positives = 302/483 (62%), Gaps = 85/483 (17%)

Query: 1   MGSNSLKDYLKRYESNTEEEXXXXXXXXXXXXXXSQPQATGLLVVDEDPTWQKPVDLGXX 60
           MGSNSLKDYLKRYESNTEEE              SQPQATGLLVVDEDPTWQKP+DLG  
Sbjct: 1   MGSNSLKDYLKRYESNTEEEKKKNKKKKQKKK--SQPQATGLLVVDEDPTWQKPIDLGEE 58

Query: 61  XXXXXXXXXKPVVDEDIEVKRMKRLEQSRARHHYNAISEDGSGWVSLSSESTNPCNSNND 120
                    KP++DEDIEVKRMKRLEQ RAR  Y+AISEDGSGWVSLSS S NP NS ND
Sbjct: 59  NNDNSSDEEKPLIDEDIEVKRMKRLEQVRARRPYHAISEDGSGWVSLSSNSENPINSIND 118

Query: 121 ISPPRKRRVRNDTPSPEPELNPSTSNRKSADLSPPHRQLKRNDTPSPDHYSQPENSEGLN 180
           +SPPRKR                    K ADLSP H+QLKRNDTPSPD+ +         
Sbjct: 119 MSPPRKR--------------------KGADLSP-HQQLKRNDTPSPDYGTSDLQ----- 152

Query: 181 SDLSPPRKR-RVQSVTVSEVHESMSSKSKFEDTDLSPPRLQHKDS--------------- 224
            D+SPPR+R R  S +   +H S++S       DLSPPR   K++               
Sbjct: 153 -DISPPRRRGRHDSPSQDALHGSVAS-------DLSPPRKIQKNAPRPGLSNISHSRSPQ 204

Query: 225 -------GKRNYETSDLQDLSPPRRGRHDSPTIDNLHGSAALDLSPPRKSQKNVARSSSY 277
                  G+ +YETSDLQD+SPPRRGRHDSP+ D  H S A DLSPPRK+QK V R    
Sbjct: 205 HLSPPRRGRHDYETSDLQDISPPRRGRHDSPSEDVSHRSVASDLSPPRKNQKKVERLGLS 264

Query: 278 DHSH------LPPPSRSVKVDSNR-----SLDPDLSPPRK-----------NSKELSIPA 315
           D SH      L PP R      +R     S   DLSPPRK           N KELS PA
Sbjct: 265 DLSHRHSPQDLSPPRRGRHDSPSRDALHGSSVSDLSPPRKIQKNVARLGSKNPKELSNPA 324

Query: 316 SVNERKTGLLSSKDIRNEIDKKKKDDMLRFKQMDPSISGRSAEPVYRDKVKGTRISKEEY 375
                KTGL+S KDIR+EID+KK+DDMLRFKQMDPSISGR AEPVYRDKVKG RISKEEY
Sbjct: 325 G----KTGLISGKDIRDEIDRKKRDDMLRFKQMDPSISGRGAEPVYRDKVKGVRISKEEY 380

Query: 376 LKSKQKVDEKAKAIEIEWGKGLAQKRXXXXXXXXXXXXXXXPFARTRDDPELGKMMKERV 435
           LKSKQKV+EK K IEIEWGKGLAQKR               PFARTRDDPEL KM+KER+
Sbjct: 381 LKSKQKVEEKPKEIEIEWGKGLAQKREAEARLKELELEKEKPFARTRDDPELDKMLKERL 440

Query: 436 RSG 438
           R G
Sbjct: 441 RWG 443


>Glyma16g21980.1
          Length = 93

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/118 (50%), Positives = 72/118 (61%), Gaps = 27/118 (22%)

Query: 70  KPVVDEDIEVKRMKRLEQSRARHHYNAISEDGSGWVSLSSESTNPCNSNNDISPPRKRRV 129
           KP++DEDIEVK MKRLEQ RARH Y+AISED SGWV  SS S NP +S ND+ PP K   
Sbjct: 3   KPLLDEDIEVKHMKRLEQVRARHPYHAISEDQSGWVLFSSNSENPISSINDMYPPHK--- 59

Query: 130 RNDTPSPEPELNPSTSNRKSADLSPPHRQLKRNDTPSPDHYSQPENSEGLNSDLSPPR 187
                            RK  DLS PH+QLK+ DTPSP++      +  L  D+SPP+
Sbjct: 60  -----------------RKGVDLS-PHQQLKKIDTPSPNY-----GTSDLQ-DISPPQ 93