Miyakogusa Predicted Gene
- chr5.CM0062.40.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr5.CM0062.40.nd - phase: 0 /partial
(136 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g37370.1 192 8e-50
Glyma10g30020.1 192 1e-49
Glyma19g42900.1 163 5e-41
Glyma03g40290.1 150 4e-37
Glyma17g02560.1 115 1e-26
Glyma07g38160.1 107 3e-24
Glyma08g43620.1 71 3e-13
>Glyma20g37370.1
Length = 546
Score = 192 bits (488), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
Query: 1 MSGHTSLRSNAIMXXXXXXXXXXXXXXFGMLTKPLIRLLLPHTDTKTDSMASL--DPSTP 58
MSGHTSLRSNAIM FG+LTKPLIRLLLPHT +S ++ DPSTP
Sbjct: 407 MSGHTSLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHTPHHKESSITITTDPSTP 466
Query: 59 --KSFTVPLLGSAQDSVGDFDAHEIRRPSSIRALLSTPTHTVHRLWRKFDNSFMRPVFGG 116
KS TVPLLGSAQ+S D D H+I RPSSIRALLSTPTHTVHRLWRKFD++FMRPVFGG
Sbjct: 467 SPKSVTVPLLGSAQESEVDIDGHDIHRPSSIRALLSTPTHTVHRLWRKFDDAFMRPVFGG 526
Query: 117 RGFVPVEPGSPSDRSNGHQW 136
RGFVP+EPGSP++R NGHQW
Sbjct: 527 RGFVPIEPGSPTER-NGHQW 545
>Glyma10g30020.1
Length = 544
Score = 192 bits (487), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
Query: 1 MSGHTSLRSNAIMXXXXXXXXXXXXXXFGMLTKPLIRLLLPHTDTKTDSMASL--DPSTP 58
MSGHTSLRSNAIM FG+LTKPLIRLLLPHT +S ++ DPSTP
Sbjct: 405 MSGHTSLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHTPHHKESSITIITDPSTP 464
Query: 59 --KSFTVPLLGSAQDSVGDFDAHEIRRPSSIRALLSTPTHTVHRLWRKFDNSFMRPVFGG 116
KS T+PLLGSAQ+S D D H+I RPSSIRALL+TPTHTVHRLWRKFD++FMRPVFGG
Sbjct: 465 SPKSVTIPLLGSAQESEVDIDGHDIHRPSSIRALLTTPTHTVHRLWRKFDDAFMRPVFGG 524
Query: 117 RGFVPVEPGSPSDRSNGHQW 136
RGFVPVEPGSP++R NGHQW
Sbjct: 525 RGFVPVEPGSPTER-NGHQW 543
>Glyma19g42900.1
Length = 528
Score = 163 bits (413), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 97/135 (71%), Gaps = 4/135 (2%)
Query: 1 MSGHTSLRSNAIMXXXXXXXXXXXXXXFGMLTKPLIRLLLPHTDT--KTDSMASLDPS-- 56
+SGHT R+NAIM FG++TKPLIR LLP + +SMA++D S
Sbjct: 394 LSGHTEQRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPVNPLPKRKNSMANIDSSNN 453
Query: 57 TPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRALLSTPTHTVHRLWRKFDNSFMRPVFGG 116
+PKS TVP LG +QDS +FD EI RPSSIRALL+TPTHTVH+LWRKFDNSFMRPVFGG
Sbjct: 454 SPKSITVPFLGGSQDSENEFDGSEIHRPSSIRALLTTPTHTVHQLWRKFDNSFMRPVFGG 513
Query: 117 RGFVPVEPGSPSDRS 131
RGFVPV P SP+ R+
Sbjct: 514 RGFVPVAPNSPTARN 528
>Glyma03g40290.1
Length = 530
Score = 150 bits (379), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 94/135 (69%), Gaps = 4/135 (2%)
Query: 1 MSGHTSLRSNAIMXXXXXXXXXXXXXXFGMLTKPLIRLLLPHTD--TKTDSMASLDP--S 56
+SGHT LR+NAIM FG++TKPLIR LLP + +SM+ + +
Sbjct: 396 LSGHTELRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPINPPPKRKNSMSDIGSFNN 455
Query: 57 TPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRALLSTPTHTVHRLWRKFDNSFMRPVFGG 116
+PKS T+P LG +QDS +FD E +RPSSIRALL+TPTHTVH+LWR FDNSFMRPVFGG
Sbjct: 456 SPKSITMPFLGGSQDSENEFDGSENQRPSSIRALLTTPTHTVHQLWRNFDNSFMRPVFGG 515
Query: 117 RGFVPVEPGSPSDRS 131
RGFVPV P S + R+
Sbjct: 516 RGFVPVVPTSTTART 530
>Glyma17g02560.1
Length = 516
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 79/130 (60%), Gaps = 13/130 (10%)
Query: 3 GHTSLRSNAIMXXXXXXXXXXXXXXFGMLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFT 62
GHT LR NAIM FG++TKPL+RLLLP + S+ S PSTPKSFT
Sbjct: 399 GHTKLRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLPWSK-HVMSLPS-PPSTPKSFT 456
Query: 63 VPLLGSAQDSVGDFDAHEIRRPSSIRALLST-PTHTVHRLWRKFDNSFMRPVFGGRGFVP 121
VPLLGS PS++R LLS PT VH WRKFD+S MRPVFGGRGFVP
Sbjct: 457 VPLLGSQNGP----------PPSTLRMLLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVP 506
Query: 122 VEPGSPSDRS 131
PGSP ++S
Sbjct: 507 YVPGSPLEQS 516
>Glyma07g38160.1
Length = 516
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 73/123 (59%), Gaps = 13/123 (10%)
Query: 3 GHTSLRSNAIMXXXXXXXXXXXXXXFGMLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFT 62
GHT LR NAIM FG++TKPL+RLLLP + S+ S PSTPKSFT
Sbjct: 405 GHTKLRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLP-SSKHVMSLPS-PPSTPKSFT 462
Query: 63 VPLLGSAQDSVGDFDAHEIRRPSSIRALLST-PTHTVHRLWRKFDNSFMRPVFGGRGFVP 121
VPLLGS PS++R LLS PT VH WRKFD+S MRPVFGGRGFVP
Sbjct: 463 VPLLGSQNGP----------PPSTLRMLLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVP 512
Query: 122 VEP 124
P
Sbjct: 513 YVP 515
>Glyma08g43620.1
Length = 416
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 2 SGHTSLRSNAIMXXXXXXXXXXXXXXFGMLTKPLIRLLLPHTDTKTDSMASLDPSTP-KS 60
SG T+ NA M FG LTKPLIR LLPH+ T+ S++ + P
Sbjct: 298 SGVTTDPVNATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHSATR-KSISHSESGPPFDD 356
Query: 61 FTVPLLGSAQDSVGDFDAHEIRRPSSIRALLSTPTHTVHRLWRKFDNSFMRPVFGG 116
+P L + + + R +S+ L+ +P T+HR WR+FD+++MRP+FGG
Sbjct: 357 LNLPFLSLEESAATNIS----RAKASLSMLIESPVFTIHRYWRRFDDAYMRPIFGG 408