Miyakogusa Predicted Gene

chr4.CM0244.330.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr4.CM0244.330.nc + phase: 0 
         (403 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06540.1                                                       324   1e-88
Glyma17g06540.2                                                       266   4e-71
Glyma13g00430.1                                                       256   4e-68
Glyma13g00430.2                                                       255   5e-68
Glyma03g19910.1                                                        45   2e-04

>Glyma17g06540.1
          Length = 347

 Score =  324 bits (831), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 216/407 (53%), Positives = 236/407 (57%), Gaps = 64/407 (15%)

Query: 1   MKHDADNGXXXXXXXXXXXXXHQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLE 60
           MKH  DNG             HQSIARY    G SK+LKKFRSEA+ EK+++  S VDLE
Sbjct: 1   MKH-TDNGAFNSEHKVLL---HQSIARYLKHSGFSKTLKKFRSEAQFEKNDLKGSPVDLE 56

Query: 61  ELFLKYLETCSQDVKSNVNDQKEQGMLLNPQKPFCNGEFLFSRTCSLSHSVGSRALTINS 120
           E+ LKY E C +D KSN+NDQ EQ                                    
Sbjct: 57  EMCLKYFEICGKDAKSNLNDQNEQ------------------------------------ 80

Query: 121 XXXXXXXXXVAGVPXXXXXXXXXXXXXXXXXXXXXXXLADNVGDDQLESQTLVTENKVKD 180
                    VAGV                        LA NV DDQLES     ENK KD
Sbjct: 81  ---------VAGVNSKNKEEGKSKEKKKKKSKLVSESLATNVEDDQLESVATAKENKEKD 131

Query: 181 DVPTDAKVINGAELXXXXXXXXXXXXXRSSEGDAVEQNGDPDETASKKEDSKASNKEVTP 240
           DV TDAKVING+E              RS EGDA+EQ GDP+ET SK+E+ +A NKE+T 
Sbjct: 132 DVSTDAKVINGSETEKKSKSKMKKKDNRSDEGDAIEQIGDPNETVSKEENIEA-NKEITH 190

Query: 241 EEKKDSKKRKRQISEENGQQVAEIKADEETKRRKIENLNEGKLQKTSNEQANKEANGYLE 300
           EEKKDSKKRKR ISEENGQQVA+IKADEETKRRKIENLNE K Q           NG LE
Sbjct: 191 EEKKDSKKRKRSISEENGQQVADIKADEETKRRKIENLNESKEQ----------TNGNLE 240

Query: 301 NATEKSG-QRSQKKQPKGSSEPKP---AFQRVQVDKIEFHDERLQDNSYWAKDGAENGYG 356
            A EKS  Q SQKKQ KGS E KP   AFQRVQVDKI+F DERLQDNSYWAKDGAENGYG
Sbjct: 241 KAGEKSSVQSSQKKQQKGSVEKKPVNAAFQRVQVDKIQFADERLQDNSYWAKDGAENGYG 300

Query: 357 AKAQEILGQVRGRDFRHEXXXXXXXXXXXXPIDLQSHSIKFNYSDDE 403
           AKA EIL QVRGR FRHE             IDLQSHS+KFNYSD++
Sbjct: 301 AKAAEILDQVRGRGFRHEKTKKKRGSYRGGQIDLQSHSVKFNYSDED 347


>Glyma17g06540.2
          Length = 345

 Score =  266 bits (679), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 178/250 (71%), Gaps = 15/250 (6%)

Query: 158 LADNVGDDQLESQTLVTENKVKDDVPTDAKVINGAELXXXXXXXXXXXXXRSSEGDAVEQ 217
           LA NV DDQLES     ENK KDDV TDAKVING+E              RS EGDA+EQ
Sbjct: 107 LATNVEDDQLESVATAKENKEKDDVSTDAKVINGSETEKKSKSKMKKKDNRSDEGDAIEQ 166

Query: 218 NGDPDETASKKEDSKASNKEVTPEEKKDSKKRKRQISEENGQQVAEIKADEETKRRKIEN 277
            GDP+ET SK+E+ +A NKE+T EEKKDSKKRKR ISEENGQQVA+IKADEETKRRKIEN
Sbjct: 167 IGDPNETVSKEENIEA-NKEITHEEKKDSKKRKRSISEENGQQVADIKADEETKRRKIEN 225

Query: 278 LNEGKLQKTSNEQANKEANGYLENATEKSG-QRSQKKQPKGSSEPKP---AFQRVQVDKI 333
           LNE K Q           NG LE A EKS  Q SQKKQ KGS E KP   AFQRVQVDKI
Sbjct: 226 LNESKEQ----------TNGNLEKAGEKSSVQSSQKKQQKGSVEKKPVNAAFQRVQVDKI 275

Query: 334 EFHDERLQDNSYWAKDGAENGYGAKAQEILGQVRGRDFRHEXXXXXXXXXXXXPIDLQSH 393
           +F DERLQDNSYWAKDGAENGYGAKA EIL QVRGR FRHE             IDLQSH
Sbjct: 276 QFADERLQDNSYWAKDGAENGYGAKAAEILDQVRGRGFRHEKTKKKRGSYRGGQIDLQSH 335

Query: 394 SIKFNYSDDE 403
           S+KFNYSD++
Sbjct: 336 SVKFNYSDED 345



 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 50/65 (76%)

Query: 22 HQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQ 81
          HQSIARY    G SK+LKKFRSEA+ EK+++  S VDLEE+ LKY E C +D KSN+NDQ
Sbjct: 18 HQSIARYLKHSGFSKTLKKFRSEAQFEKNDLKGSPVDLEEMCLKYFEICGKDAKSNLNDQ 77

Query: 82 KEQGM 86
           EQG+
Sbjct: 78 NEQGV 82


>Glyma13g00430.1
          Length = 374

 Score =  256 bits (654), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 154/250 (61%), Positives = 170/250 (68%), Gaps = 18/250 (7%)

Query: 158 LADNVGDDQLESQTLVTENKVKDDVPTDAKVINGAELXXXXXXXXXXXXXRSSEGDAVEQ 217
           LA NV D+ LES   V ENKVKD V TDAKVING+E              +S +GD +EQ
Sbjct: 139 LATNVEDNHLESVATVEENKVKDGVSTDAKVINGSEKEKKSKSKMKKKDKQSGQGDVIEQ 198

Query: 218 NGDPDETASKKEDSKASNKEVTPEEKKDSKKRKRQISEENGQQVAEIKADEETKRRKIEN 277
            GDP+ET SK+E+ +ASNKE+  E +KDSKKRKR ISEENGQQVA    DEETKR+KIEN
Sbjct: 199 IGDPNETVSKEENIEASNKEMMHEVEKDSKKRKRPISEENGQQVA----DEETKRQKIEN 254

Query: 278 LNEGKLQKTSNEQANKEANGYLENATEKSG-QRSQKKQPKGSSEPKP---AFQRVQVDKI 333
           LNE K Q           NG LE   EKS  Q S KKQ KGS E KP   AFQRVQVDKI
Sbjct: 255 LNESKEQ----------TNGNLEKGGEKSSVQGSLKKQQKGSVEKKPVKPAFQRVQVDKI 304

Query: 334 EFHDERLQDNSYWAKDGAENGYGAKAQEILGQVRGRDFRHEXXXXXXXXXXXXPIDLQSH 393
           +F DERLQDNSYWAKDGAENGYGAKA EIL QVRGR FRHE             IDLQSH
Sbjct: 305 QFTDERLQDNSYWAKDGAENGYGAKAAEILDQVRGRGFRHEKTKKKRGSYRGGQIDLQSH 364

Query: 394 SIKFNYSDDE 403
           S+KFNYSD++
Sbjct: 365 SVKFNYSDED 374



 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 3/84 (3%)

Query: 1   MKHDADNGXXXXXXXXXXXXXHQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLE 60
           MKH  DNG             HQSIARY +R G SK+LKKF SEA IEK++++ S VDLE
Sbjct: 30  MKHTTDNGTPISEHKVLL---HQSIARYLERSGFSKTLKKFLSEAHIEKNDLEGSPVDLE 86

Query: 61  ELFLKYLETCSQDVKSNVNDQKEQ 84
           E+ LKYLE C +D KSN+NDQ EQ
Sbjct: 87  EMCLKYLEICGKDGKSNINDQNEQ 110


>Glyma13g00430.2
          Length = 372

 Score =  255 bits (652), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 154/250 (61%), Positives = 170/250 (68%), Gaps = 18/250 (7%)

Query: 158 LADNVGDDQLESQTLVTENKVKDDVPTDAKVINGAELXXXXXXXXXXXXXRSSEGDAVEQ 217
           LA NV D+ LES   V ENKVKD V TDAKVING+E              +S +GD +EQ
Sbjct: 137 LATNVEDNHLESVATVEENKVKDGVSTDAKVINGSEKEKKSKSKMKKKDKQSGQGDVIEQ 196

Query: 218 NGDPDETASKKEDSKASNKEVTPEEKKDSKKRKRQISEENGQQVAEIKADEETKRRKIEN 277
            GDP+ET SK+E+ +ASNKE+  E +KDSKKRKR ISEENGQQVA    DEETKR+KIEN
Sbjct: 197 IGDPNETVSKEENIEASNKEMMHEVEKDSKKRKRPISEENGQQVA----DEETKRQKIEN 252

Query: 278 LNEGKLQKTSNEQANKEANGYLENATEKSG-QRSQKKQPKGSSEPKP---AFQRVQVDKI 333
           LNE K Q           NG LE   EKS  Q S KKQ KGS E KP   AFQRVQVDKI
Sbjct: 253 LNESKEQ----------TNGNLEKGGEKSSVQGSLKKQQKGSVEKKPVKPAFQRVQVDKI 302

Query: 334 EFHDERLQDNSYWAKDGAENGYGAKAQEILGQVRGRDFRHEXXXXXXXXXXXXPIDLQSH 393
           +F DERLQDNSYWAKDGAENGYGAKA EIL QVRGR FRHE             IDLQSH
Sbjct: 303 QFTDERLQDNSYWAKDGAENGYGAKAAEILDQVRGRGFRHEKTKKKRGSYRGGQIDLQSH 362

Query: 394 SIKFNYSDDE 403
           S+KFNYSD++
Sbjct: 363 SVKFNYSDED 372



 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 1   MKHDADNGXXXXXXXXXXXXXHQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLE 60
           MKH  DNG             HQSIARY +R G SK+LKKF SEA IEK++++ S VDLE
Sbjct: 30  MKHTTDNGTPISEHKVLL---HQSIARYLERSGFSKTLKKFLSEAHIEKNDLEGSPVDLE 86

Query: 61  ELFLKYLETCSQDVKSNVNDQKEQG 85
           E+ LKYLE C +D KSN+NDQ EQG
Sbjct: 87  EMCLKYLEICGKDGKSNINDQNEQG 111


>Glyma03g19910.1
          Length = 164

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/23 (82%), Positives = 20/23 (86%)

Query: 349 DGAENGYGAKAQEILGQVRGRDF 371
           DGAENGYGAKA EI+ QVRG DF
Sbjct: 1   DGAENGYGAKAAEIVDQVRGSDF 23