Miyakogusa Predicted Gene

chr3.LjT34H24.100.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.LjT34H24.100.nd - phase: 1 /partial
         (322 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g01310.1                                                       476   e-134
Glyma13g44030.1                                                       470   e-133
Glyma13g44030.2                                                       355   2e-98

>Glyma15g01310.1
          Length = 436

 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/327 (73%), Positives = 260/327 (79%), Gaps = 6/327 (1%)

Query: 1   VRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXX 60
           VRTQ MYQLLDSGFIGLIFSCYSED NKVGRIQVIAFQSSDGKQNH SRPIPLSPVNR  
Sbjct: 110 VRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQNHRSRPIPLSPVNRSP 169

Query: 61  XXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYL 120
                             GYF+AE+ +QDT                 LGNFFANADA+YL
Sbjct: 170 VIDIDSSPSSSENVSTKPGYFEAENAEQDTGDSRSVVVSKDGGRSD-LGNFFANADANYL 228

Query: 121 GGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLS 180
           G +K GGNY  NNSD+  +D+DPMDMSESMQEAMHRSNLDMSGAE+VR+EIPLYVLP+LS
Sbjct: 229 GRDKSGGNYHPNNSDTNIVDVDPMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALS 288

Query: 181 LINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIE 240
           LINLDSPL+SY DLQHV+FEEE+ AYNQAI QNMRD KVHPLTFIHHTSTYQASLCKLIE
Sbjct: 289 LINLDSPLSSYTDLQHVLFEEEQNAYNQAILQNMRDGKVHPLTFIHHTSTYQASLCKLIE 348

Query: 241 YCLSPAITALQDRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRVASPVHQVASP- 299
           YCLSPAI ALQDRLRENE+RLA++SEEAKSLEAEAYRGSEAS+ SPRRVASPVH+  S  
Sbjct: 349 YCLSPAINALQDRLRENEIRLAVLSEEAKSLEAEAYRGSEASVGSPRRVASPVHRGGSSP 408

Query: 300 ----VHRGSLSPASRNVASPGSRSRRG 322
               +H    S  SRNVASPGSRSR+G
Sbjct: 409 GLRNLHDSPESLGSRNVASPGSRSRKG 435


>Glyma13g44030.1
          Length = 436

 Score =  470 bits (1209), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/327 (71%), Positives = 257/327 (78%), Gaps = 6/327 (1%)

Query: 1   VRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXX 60
           VRTQ MYQLLDSGFIGLIFSCYSED NKVGRIQVIAFQSSDGK NHMSRP+PLSPVNR  
Sbjct: 110 VRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSP 169

Query: 61  XXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYL 120
                             GYFKAE+ +QDT                 LGNFFANADA+YL
Sbjct: 170 VIDIDSSPSSSENVSTRPGYFKAENAEQDTGDSRSVVVSKDGGRSD-LGNFFANADANYL 228

Query: 121 GGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLS 180
           G +K GGNY  NNSD+  +D+D MDMSESMQEAMHRSNLDMSGAE+VR+EIPLYVLP+LS
Sbjct: 229 GRDKSGGNYHPNNSDTNIVDVDAMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALS 288

Query: 181 LINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIE 240
           LIN+DSPL+SY DLQHV+FEEER AYNQAI QN RD KVHPLTFIHHTSTYQASLCKLIE
Sbjct: 289 LINIDSPLSSYTDLQHVLFEEERNAYNQAILQNKRDGKVHPLTFIHHTSTYQASLCKLIE 348

Query: 241 YCLSPAITALQDRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRVASPVHQVASP- 299
           YCLSPAI ALQDRLRENE+RLA++ EEAKSLEAEAYRGSEAS+ +PRRVASPVH+  S  
Sbjct: 349 YCLSPAINALQDRLRENEIRLAVLREEAKSLEAEAYRGSEASVGTPRRVASPVHRGGSSP 408

Query: 300 ----VHRGSLSPASRNVASPGSRSRRG 322
               +H    S  SRNVASPGSRSR+G
Sbjct: 409 GLRNLHDSPESLGSRNVASPGSRSRKG 435


>Glyma13g44030.2
          Length = 393

 Score =  355 bits (912), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 174/241 (72%), Positives = 188/241 (78%), Gaps = 1/241 (0%)

Query: 1   VRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXX 60
           VRTQ MYQLLDSGFIGLIFSCYSED NKVGRIQVIAFQSSDGK NHMSRP+PLSPVNR  
Sbjct: 110 VRTQAMYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSP 169

Query: 61  XXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYL 120
                             GYFKAE+ +QDT                 LGNFFANADA+YL
Sbjct: 170 VIDIDSSPSSSENVSTRPGYFKAENAEQDTGDSRSVVVSKDGGRSD-LGNFFANADANYL 228

Query: 121 GGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLS 180
           G +K GGNY  NNSD+  +D+D MDMSESMQEAMHRSNLDMSGAE+VR+EIPLYVLP+LS
Sbjct: 229 GRDKSGGNYHPNNSDTNIVDVDAMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALS 288

Query: 181 LINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIE 240
           LIN+DSPL+SY DLQHV+FEEER AYNQAI QN RD KVHPLTFIHHTSTYQASLCKLIE
Sbjct: 289 LINIDSPLSSYTDLQHVLFEEERNAYNQAILQNKRDGKVHPLTFIHHTSTYQASLCKLIE 348

Query: 241 Y 241
           Y
Sbjct: 349 Y 349