Miyakogusa Predicted Gene

chr3.CM0996.130.nd

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0996.130.nd - phase: 0 
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g17100.1                                                       140   4e-34
Glyma03g14540.1                                                        57   3e-09

>Glyma08g17100.1
          Length = 78

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 70/78 (89%), Positives = 74/78 (94%)

Query: 1  MSGAQGAQPKESLTATTYESVEGGANRTRTDLRSKEDQGSIQVDKLQEKVNDPAGKGGPV 60
          MSGAQGAQPKES TATTYESVEGG NRTRTDL S+EDQG IQV+KLQEKV+DPAGKGGPV
Sbjct: 1  MSGAQGAQPKESKTATTYESVEGGENRTRTDLLSREDQGCIQVEKLQEKVHDPAGKGGPV 60

Query: 61 FGAGKDENKQDLGVTGTG 78
          FGAGKDE+KQDLGVTGTG
Sbjct: 61 FGAGKDEDKQDLGVTGTG 78


>Glyma03g14540.1
          Length = 39

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 10/49 (20%)

Query: 1  MSGAQGAQPKESLTATTYESVEGGANRTRTDLRSKEDQGSIQVDKLQEK 49
          M G QGAQPKES TATTYE          TDL S+EDQGSIQ++KLQEK
Sbjct: 1  MPGVQGAQPKESKTATTYE----------TDLLSREDQGSIQMEKLQEK 39