Miyakogusa Predicted Gene

chr3.CM0590.180.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0590.180.nc - phase: 0 /partial
         (434 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g12510.1                                                        65   1e-10

>Glyma07g12510.1
          Length = 46

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/31 (96%), Positives = 30/31 (96%)

Query: 261 AYRAIVFRPDAIFVLLRKAYKDSDLGSVCRM 291
           AYRAIVFR DAIFVLLRKAYKDSDLGSVCRM
Sbjct: 2   AYRAIVFRADAIFVLLRKAYKDSDLGSVCRM 32