Miyakogusa Predicted Gene
- chr2.LjT40P05.10.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.LjT40P05.10.nd + phase: 0
(684 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g30100.1 737 0.0
Glyma10g37780.1 675 0.0
Glyma09g25110.1 420 e-117
Glyma20g30060.1 362 1e-99
Glyma10g37780.2 263 4e-70
Glyma10g14950.1 113 6e-25
Glyma07g20880.1 98 3e-20
Glyma15g36220.1 92 1e-18
>Glyma16g30100.1
Length = 626
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/657 (58%), Positives = 452/657 (68%), Gaps = 38/657 (5%)
Query: 28 RTDNAIRQVAGTEPVIYFPRAGVNPVQWIQVLHALDQQGGSNSYSGWPLLSSLRCQLQKC 87
R D IRQ G EP I FPRA +PVQWIQ+LHALD Q + GWPL S L+ QLQKC
Sbjct: 8 RIDTLIRQAIGKEPFIPFPRASESPVQWIQLLHALDPQ----EFPGWPLFSPLKVQLQKC 63
Query: 88 DKCSQEFCSPVNYRRHISVHHRWRKLDKDSTKVRDLLGAYWDKLSVEEAKEVVSFENVML 147
DKCS+EFCSPVNYRRHI VHHR +KLDKD TK +DLLGAYWDKLSVEEAKEVVSFENV+L
Sbjct: 64 DKCSREFCSPVNYRRHIRVHHRLKKLDKDFTKTKDLLGAYWDKLSVEEAKEVVSFENVLL 123
Query: 148 KEVPGSSILESLMTLVQKQGFSLLPQYYLRAGAALLDIVQSKPSSFPISSLELFSILDDA 207
+EVP SSIL+SL T +Q QGF PQYYL AGAALLDIVQSKPS FPISS ELFSILDDA
Sbjct: 124 EEVPASSILKSLTTFIQNQGFYSFPQYYLMAGAALLDIVQSKPSCFPISSQELFSILDDA 183
Query: 208 SEKTCLWGTAVSMQKHLLDGGAGKIGLEPENVVAWTSFLLEQKLVEAWLSDRDAEALRCQ 267
SE TCL GTA SMQ+++ DG AGKIGLEP+N+VA TSFLLEQKLV+AWL+D+DAEALRCQ
Sbjct: 184 SENTCLCGTAESMQRYVFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQ 243
Query: 268 KQLVXXXXXXXXXXXXILXXXXXXXXXXXXXXXXXXXHKDVEEIKKNIDSAVKDLSRAEA 327
KQLV IL H+ EIK +IDS VK LS AEA
Sbjct: 244 KQLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQRHQAEAEIKGDIDSTVKALSPAEA 303
Query: 328 SLDRYNSEGHDLDTFADNNTPLHVPFQCSDTNEGIDEITQSRHDFGSDQNIERQSARGHN 387
SLD YN E H+ TF+DN VPFQC DT+E I+ S + +DQ+I RQSA GH
Sbjct: 304 SLDTYNFEAHNPSTFSDNAAS-PVPFQCPDTSEEINGDIHSESETITDQDIVRQSAHGHK 362
Query: 388 HRRSAVARWQEPPKLQWAVANGLHKNLHTPISKNEVNTQKGIGRDQKAAATVNGSKAWSQ 447
H+R AVAR Q PKLQWAVANGLH ++P+SK E+N + G DQKA++ VNGSK W++
Sbjct: 363 HKRQAVARQQGLPKLQWAVANGLHTKQNSPVSKLEINQKYGTHCDQKASSIVNGSKVWTR 422
Query: 448 KPKSEIDRVVLKTKAEKEPDLVKNHVVLIGSISVNLGNCRKSEGNVVESQEDCMVKNVAE 507
K K+EID+VVLKT EKEPD VKN VLIGSISVNL NC +SEGN+V SQ+D +V+N+ +
Sbjct: 423 KSKTEIDKVVLKTIKEKEPDQVKNQEVLIGSISVNLSNCSQSEGNMVASQKDFIVENMGK 482
Query: 508 QNSSQDKPMEPDLVVTGNNQLKVRHWRPVIQLETKDTLPVQNGGTGVDVVHGNGDCRNLS 567
QN S+DKPM+ DL + NN+ V+ WRPV +LETKD LPVQ+GGT VD VH N D
Sbjct: 483 QNISRDKPMKTDLAMGDNNRSTVKFWRPVSRLETKDPLPVQSGGTKVDAVHENED----- 537
Query: 568 GPTSFENNNSHPEGRVNRGSLQSSIHEAKAFLAQRWKEALLSNHVKLVVSPDSKSPRCQE 627
+ + GS I AKAFLAQRWKEA+ S HV LV+ PDS+ P C+E
Sbjct: 538 --------------KADPGSFWFDIQAAKAFLAQRWKEAISSEHVTLVICPDSEPPGCEE 583
Query: 628 IQHSNIAACNSSDERCNIIANADNRLPATXXXXXXXXXXXXENGNKTKYIPKQRSAT 684
IQ AAC SSD + A + RL + E G K KYIPKQ++ T
Sbjct: 584 IQDLKTAACQSSD--MDGFAKSKPRLKKS------------EKGTKIKYIPKQKTNT 626
>Glyma10g37780.1
Length = 628
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/650 (56%), Positives = 450/650 (69%), Gaps = 35/650 (5%)
Query: 48 AGVNPVQWIQVLHALDQQGGSNSYSGWPLLSSLRCQLQKCDKCSQEFCSPVNYRRHISVH 107
AG +PVQWIQ+L+ALDQQ GWPLLS ++ QLQKC+KCS+EFCSP+NYRRHI V
Sbjct: 1 AGDSPVQWIQLLNALDQQ----ELPGWPLLSPVKVQLQKCNKCSREFCSPINYRRHIRVQ 56
Query: 108 HRWRKLDKDSTKVRDLLGAYWDKLSVEEAKEVVSFENVMLKEVPGSSILESLMTLVQKQG 167
HR +KLDKDS K RDLLGAYWDKLS+EE+KEVVSF+NVML+EVPGSSILE+L TL +KQG
Sbjct: 57 HRLKKLDKDSEKNRDLLGAYWDKLSIEESKEVVSFKNVMLEEVPGSSILEALTTL-RKQG 115
Query: 168 FSLLPQYYLRAGAALLDIVQSKPSSFPISSLELFSILDDASEKTCLWGTAVSMQKHLLDG 227
FS LPQYYLRAG ALL+IVQS+PSSFPISS ELFSILDD+SEKT L G+AVSMQ+++ DG
Sbjct: 116 FSSLPQYYLRAGTALLNIVQSRPSSFPISSQELFSILDDSSEKTFLVGSAVSMQRYVFDG 175
Query: 228 GAGKIGLEPENVVAWTSFLLEQKLVEAWLSDRDAEALRCQKQLVXXXXXXXXXXXXILXX 287
AGKIGLEP+N+VA TSFLLEQKLV+AWL+D+DAEALRCQK LV IL
Sbjct: 176 EAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRKAEILER 235
Query: 288 XXXXXXXXXXXXXXXXXHKDVEEIKKNIDSAVKDLSRAEASLDRYNSEGHDLDTFADNNT 347
D E IK+NI S +D+ AEAS + E + D FAD++
Sbjct: 236 KRQKKLRQKEHKARERLEDDTE-IKENISSTGEDVLPAEASSGTCDFEAQNPDIFADHSP 294
Query: 348 PLHVPFQCSDTNEGIDEITQSRHDFGSDQNIERQSARGHNHRRSAVARWQEPPKLQWAVA 407
P HV +C DTNE ++ T S +DF +DQ IERQ++RGHN RR ARWQ PK QWA A
Sbjct: 295 PPHVTSRCLDTNEVVEGDTVSGYDFDTDQYIERQASRGHNRRRIMAARWQGLPKSQWAKA 354
Query: 408 NGLHKNLHTPISKNEVNTQKGIGRDQKAAATVNGSKAWSQKPKSEIDRVVLKTKAEKEPD 467
NG H ++ +SK V + G RDQ+AA VNGSK WS+KPK E + VVLK K +KEPD
Sbjct: 355 NGSHAGQNSQMSKLGVIQKHGTNRDQRAAPIVNGSKVWSRKPKPETNGVVLKAKLQKEPD 414
Query: 468 LVKNHVVLIGSISVNLGNCRK-SEGNVVESQEDCMVKNVAEQNSSQDKPMEPDLVVTGNN 526
K+H VLIGS+SV+L C S+GN+V +Q DC+V+N+A+QN++Q+KP++ D N
Sbjct: 415 KGKSHEVLIGSVSVSLDYCSSHSQGNLVAAQRDCVVENLAKQNTAQEKPVKHDSFQGSNG 474
Query: 527 QLKVRHWRPVIQLETKDTLPVQNGGTGVDVVHGNGDCRNLSGPTS------------FEN 574
+L V+ WRPV QL TKD LP+QNG T DV++G D +NLSG +S FE+
Sbjct: 475 RLTVKLWRPVSQLGTKDPLPLQNGETEADVINGKYD-QNLSGQSSLRLCSIDGSDIGFED 533
Query: 575 NNSHPEGRVNRGSLQSSIHEAKAFLAQRWKEALLSNHVKLVVSPDSKSPRCQEIQHSNIA 634
N SH +V+ SL+ + H AKAFLAQRWKEA+ SNHVKLVV+PD CQ
Sbjct: 534 NFSHTGAKVDSESLRLTSHAAKAFLAQRWKEAISSNHVKLVVTPD-----CQ-------- 580
Query: 635 ACNSSDERCNIIANADNRLPATXXXXXXXXXXXXENGNKTKYIPKQRSAT 684
+S+ +R NI+AN +NRLPAT E G K KYIPKQ+ AT
Sbjct: 581 --SSNADRFNILANTENRLPATSGVAKSKPKTKPEKGMKIKYIPKQKEAT 628
>Glyma09g25110.1
Length = 472
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/511 (47%), Positives = 304/511 (59%), Gaps = 64/511 (12%)
Query: 197 SLELFSILDDASEKTCLWGTAVSMQKHLLDGGAGKIGLEPENVVAWTSFLLEQKLVEAWL 256
S+ L +++ +KTCL G A SMQ+++ DG GKIGLEP+N+V+ TSFLLEQKL++ WL
Sbjct: 3 SVSLMTLV----KKTCLCGIAESMQRYVFDGEDGKIGLEPKNLVSSTSFLLEQKLLKGWL 58
Query: 257 SDRDAEALRCQKQLVXXXXXXXXXXXXILXXXXXXXXXXXXXXXXXXXHKDVEEIKKNID 316
D+DAEALRCQKQL IL HK EIK NID
Sbjct: 59 VDKDAEALRCQKQLEEEEEAAQKRQAEILERKRQKKLRQKEQKAREQRHKTEAEIKGNID 118
Query: 317 SAVKDLSR---------AEASLDRYNSEGHDLDTFADNNTPLHVPFQCSDTNEGIDEITQ 367
S VK L EASLD YN E H+ +TF+D++ VP QC+DTNE
Sbjct: 119 STVKALLLAEASLALSLVEASLDTYNFEAHNPNTFSDSSAS-PVPSQCADTNE------- 170
Query: 368 SRHDFGSDQNIERQSARGHNHRRSAVARWQEPPKLQWAVANGLHKNLHTPISKNEVNTQK 427
H+R AVAR Q PK QW +ANGLH N ++P+SK E+N +
Sbjct: 171 -------------------KHQRQAVARQQGLPKSQWTIANGLHTNQNSPVSKLEINQKY 211
Query: 428 GIGRDQKAAATVNGSKAWSQKPKSEIDRVVLKTKAEKEPDLVKNHVVLIGSISVNLGNCR 487
G DQKA+A VNGSK W++K K EID+VVLKT E +PD +KN LIGSISVNL NC
Sbjct: 212 GTRCDQKASAIVNGSKVWTRKSKIEIDKVVLKTIQENKPDQIKNQEFLIGSISVNLSNCS 271
Query: 488 KSEGNVVESQEDCMVKNVAEQNSSQDKPMEPDLVVTGNNQLKVRHWRPVIQLETKDTLPV 547
+SEGN+V SQ+DCMV+NV +QN S+DKPM+ D+ + GNN+ V+ WRPV +LETKD LPV
Sbjct: 272 QSEGNMVASQKDCMVENVGKQNISRDKPMKTDVAMGGNNRSTVKLWRPVSRLETKDPLPV 331
Query: 548 QNGGTGVDVVHGNGDCRNLSGPTS------------FENNNSHPEGRVNRGSLQSSIHEA 595
Q+GG VD VHGNG +NLSGP+S F SH EG+ + GSL I A
Sbjct: 332 QSGGIEVDAVHGNG--QNLSGPSSLRVSTADGGDIGFAKYFSHTEGKADSGSLLFDIQAA 389
Query: 596 KAFLAQRWKEALLSNHVKLVVSPDSKSPRCQEIQHSNIAACNSSD-ERCNIIANADNRLP 654
KAFLAQ+ HV LV+ PDS+ P C+E++ AA SS + CNI+ANAD RLP
Sbjct: 390 KAFLAQK--------HVTLVICPDSEPPGCEEMRDLKTAAYQSSAVDSCNIVANADKRLP 441
Query: 655 ATXXXXXXX-XXXXXENGNKTKYIPKQRSAT 684
AT E G K KYIPKQ++ T
Sbjct: 442 ATSRVVKSKPRSKKSEKGTKIKYIPKQKTNT 472
>Glyma20g30060.1
Length = 438
Score = 362 bits (928), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 222/481 (46%), Positives = 284/481 (59%), Gaps = 59/481 (12%)
Query: 220 MQKHLLDGGAGKIGLEPENVVAWTSFLLEQKLV-EAW-LSDRDAEAL--RCQKQLVXXXX 275
MQ+++ DG AGKIGLEP+N+VA TSFLLEQ LV E W + E L + QK+L
Sbjct: 1 MQRYVFDGEAGKIGLEPKNLVACTSFLLEQNLVLEEWQIFQGKYEILERKHQKKLRQKEH 60
Query: 276 XXXXXXXXILXXXXXXXXXXXXXXXXXXXHKDVEEIKKNIDSAVKDLSRAEASLDRYNSE 335
+D EIK+NI S +D+S EAS + E
Sbjct: 61 KARERL------------------------EDDTEIKENIRSTGEDVSPTEASSGTCDFE 96
Query: 336 GHDLDTFADNNTPLHVPFQCSDTNEGIDEITQSRHDFGSDQNIERQSARGHNHRRSAVAR 395
H+ D FAD++TP HV +C D +E I+ +T S +DF +DQ IERQ++RGHNHRR R
Sbjct: 97 AHNPDIFADHSTPPHVTSRCLDNDEVIEGVTLSGYDFDTDQYIERQTSRGHNHRRIMATR 156
Query: 396 WQEPPKLQWAVANGLHKNLHTPISKNEVNTQKGIGRDQKAAATVNGSKAWSQKPKSEIDR 455
WQ PK QWA+ANG H ++ +SK V + G DQ+ A VNGSK WS+KPK E +
Sbjct: 157 WQGLPKSQWAIANGSHPGHNSQMSKLGVIQKHGTNCDQRVAPIVNGSKFWSRKPKPETNG 216
Query: 456 VVLKTKAEKEPDLVKNHVVLIGSISVNLGNCRKSEGNVVESQEDCMVKNVAEQNSSQDKP 515
VVLK + +KEPD KNH VLIGS+SV LGNC SEGN+V Q D +V N+A+QN++Q+KP
Sbjct: 217 VVLKARLQKEPDKCKNHEVLIGSVSVCLGNCSHSEGNLVAPQRDSLVDNLAKQNTAQEKP 276
Query: 516 MEPDLVVTGNNQLKVRHWRPVIQLETKDTLPVQNGGTGVDVVHGNGDCRNLSGPTS---- 571
++ D N +L V+ WRPV Q TKD LP+QNGGT DV++G D NLSG S
Sbjct: 277 VKHDSSQGSNGRLTVKLWRPVSQHGTKDLLPLQNGGTEADVINGKYDL-NLSGQCSLRLC 335
Query: 572 --------FENNNSHPEGRVNRGSLQSSIHEAKAFLAQRWKEALLSNHVKLVVSPDSKSP 623
F +N SH + SL+ S H AKAFL QRWKEA+ SNHVKL V+PD
Sbjct: 336 SIDGSDIGFGDNFSHTG---DSESLRLSSHAAKAFLVQRWKEAISSNHVKLFVTPD---- 388
Query: 624 RCQEIQHSNIAACNSSDERCNIIANADNRLPATXXXXXXXXXXXXENGNKTKYIPKQRSA 683
CQ +S+ +RC+IIAN++NRLPAT E G K KYIPKQ++
Sbjct: 389 -CQ----------SSNADRCSIIANSENRLPATSGVAKSKPKTKLEKGMKIKYIPKQKAT 437
Query: 684 T 684
T
Sbjct: 438 T 438
>Glyma10g37780.2
Length = 290
Score = 263 bits (672), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 195/305 (63%), Gaps = 29/305 (9%)
Query: 393 VARWQEPPKLQWAVANGLHKNLHTPISKNEVNTQKGIGRDQKAAATVNGSKAWSQKPKSE 452
ARWQ PK QWA ANG H ++ +SK V + G RDQ+AA VNGSK WS+KPK E
Sbjct: 2 AARWQGLPKSQWAKANGSHAGQNSQMSKLGVIQKHGTNRDQRAAPIVNGSKVWSRKPKPE 61
Query: 453 IDRVVLKTKAEKEPDLVKNHVVLIGSISVNLGNCRK-SEGNVVESQEDCMVKNVAEQNSS 511
+ VVLK K +KEPD K+H VLIGS+SV+L C S+GN+V +Q DC+V+N+A+QN++
Sbjct: 62 TNGVVLKAKLQKEPDKGKSHEVLIGSVSVSLDYCSSHSQGNLVAAQRDCVVENLAKQNTA 121
Query: 512 QDKPMEPDLVVTGNNQLKVRHWRPVIQLETKDTLPVQNGGTGVDVVHGNGDCRNLSGPTS 571
Q+KP++ D N +L V+ WRPV QL TKD LP+QNG T DV++G D +NLSG +S
Sbjct: 122 QEKPVKHDSFQGSNGRLTVKLWRPVSQLGTKDPLPLQNGETEADVINGKYD-QNLSGQSS 180
Query: 572 ------------FENNNSHPEGRVNRGSLQSSIHEAKAFLAQRWKEALLSNHVKLVVSPD 619
FE+N SH +V+ SL+ + H AKAFLAQRWKEA+ SNHVKLVV+PD
Sbjct: 181 LRLCSIDGSDIGFEDNFSHTGAKVDSESLRLTSHAAKAFLAQRWKEAISSNHVKLVVTPD 240
Query: 620 SKSPRCQEIQHSNIAACNSSDERCNIIANADNRLPATXXXXXXXXXXXXENGNKTKYIPK 679
CQ +S+ +R NI+AN +NRLPAT E G K KYIPK
Sbjct: 241 -----CQ----------SSNADRFNILANTENRLPATSGVAKSKPKTKPEKGMKIKYIPK 285
Query: 680 QRSAT 684
Q+ AT
Sbjct: 286 QKEAT 290
>Glyma10g14950.1
Length = 65
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 59/64 (92%)
Query: 84 LQKCDKCSQEFCSPVNYRRHISVHHRWRKLDKDSTKVRDLLGAYWDKLSVEEAKEVVSFE 143
LQKC+KCS+EFCSP+NYRRHI + H+ +KLDKDS K RDLLGAYWDKLSVEEAKEVVSF+
Sbjct: 1 LQKCNKCSREFCSPINYRRHIRIQHQLKKLDKDSDKNRDLLGAYWDKLSVEEAKEVVSFK 60
Query: 144 NVML 147
NV+L
Sbjct: 61 NVIL 64
>Glyma07g20880.1
Length = 63
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/57 (77%), Positives = 50/57 (87%)
Query: 94 FCSPVNYRRHISVHHRWRKLDKDSTKVRDLLGAYWDKLSVEEAKEVVSFENVMLKEV 150
FCSP+NYRRHI + H +KLDKDS K RDLLGAYWDKLSVEEAKEVVSF+NVML+ +
Sbjct: 1 FCSPINYRRHIRIQHPLKKLDKDSDKNRDLLGAYWDKLSVEEAKEVVSFKNVMLEVI 57
>Glyma15g36220.1
Length = 71
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 182 LLDIVQSKPSSFPISSLELFSILDDASEK-TCLWGTAVSMQKHLLDGGAGKIGLEPENVV 240
L DIVQSKPS FPISS ELF+ILDDASEK T L GT SMQ ++ DG AGKIGLEP+ +V
Sbjct: 1 LRDIVQSKPSCFPISSHELFNILDDASEKNTWLCGTTESMQIYVFDGEAGKIGLEPKKLV 60
Query: 241 AWTSFLLEQKL 251
A SF+LE KL
Sbjct: 61 ACISFVLEHKL 71