Miyakogusa Predicted Gene

chr2.CM0904.170.nd

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0904.170.nd - phase: 0 /pseudo/partial
         (514 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20140.1                                                        48   2e-05
Glyma02g09380.1                                                        46   1e-04
Glyma12g29040.1                                                        45   3e-04

>Glyma08g20140.1
          Length = 688

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 200 YWAEENLVY--PIYFLSYVSSSTIDYVKSFLEWMSDTIAKSFEQTRENIFLLKYITLLVN 257
           YWA    ++  PIY+ S ++   +   +++   M+D +    +  + N F  K+I+ L +
Sbjct: 264 YWANHPELHNIPIYYASPLAKKCLTVYETYTLSMNDRV----QNAKSNPFSFKHISALSS 319

Query: 258 KTELDNVPDGPKVVLASMASLEAGFSHDIFVEWGSDVKNLVLFTEKGQFATLARMLQADP 317
                +V  GP VV+AS   L++G S  +F +W SD KN  +        TLA+ +  +P
Sbjct: 320 IEVFKDV--GPSVVMASPGGLQSGLSRQLFDKWCSDKKNTCVLPGFVVEGTLAKTIMTEP 377


>Glyma02g09380.1
          Length = 532

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%)

Query: 200 YWAEENLVYPIYFLSYVSSSTIDYVKSFLEWMSDTIAKSFEQTRENIFLLKYITLLVNKT 259
           YW   NL  PIYF + ++     Y K  + W    I  ++  ++ N F  K +     + 
Sbjct: 254 YWERMNLKVPIYFSAGLTIQANAYYKMLIRWTRQKIKDTY--SKHNAFDFKNVQKF--ER 309

Query: 260 ELDNVPDGPKVVLASMASLEAGFSHDIFVEWGSDVKNLV 298
            + + P GP V+ A+   L  GFS ++F  W     NLV
Sbjct: 310 SMIDAP-GPCVLFATPGMLSGGFSVEVFKHWAVSENNLV 347


>Glyma12g29040.1
          Length = 689

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 200 YWAE--ENLVYPIYFLSYVSSSTIDYVKSFLEWMSDTIAKSFEQTRENIFLLKYITLLVN 257
           YWA   E    PIY+ S ++   +   +++   M+D I    +  + N F  K+++ L +
Sbjct: 265 YWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI----QNAKSNPFSFKHVSALSS 320

Query: 258 KTELDNVPDGPKVVLASMASLEAGFSHDIFVEWGSDVKNLVLFTEKGQFATLARMLQADP 317
                +V  GP VV+AS   L++G S  +F  W SD KN  +        TLA+ +  +P
Sbjct: 321 IEVFKDV--GPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVLPGYVVEGTLAKTIINEP 378