Miyakogusa Predicted Gene

chr2.CM0120.50.nc
Show Alignment:  
BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0120.50.nc - phase: 0 
         (643 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g07690.1                                                       925   0.0  

>Glyma01g07690.1
          Length = 646

 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/616 (72%), Positives = 503/616 (81%), Gaps = 14/616 (2%)

Query: 31  DPFMDQMVANFNKLANQPSPPMGFTENMSATFLSSGNPCLDFFFHVVPDTPPESLTERLQ 90
           DPF+DQMV  FN +++ P P M  TENMS TF ++GNPCLDFFFHVVPDTPPE++ +RL+
Sbjct: 42  DPFIDQMVVKFNTMSSPPPPNMTLTENMSPTFFTTGNPCLDFFFHVVPDTPPETILQRLE 101

Query: 91  LAWWHNPLTTLKLVCNLRGVRGTGKSDREGFYAAALWLHRNHPKTLVSNVPLLAEFGYFK 150
           LAW  NPLT LKLVCNLRGVRGTGKSDR+ FY AALWLHR HPKTL +NV  LAEFGYFK
Sbjct: 102 LAWALNPLTALKLVCNLRGVRGTGKSDRQSFYPAALWLHRRHPKTLAANVSSLAEFGYFK 161

Query: 151 DLPEILYRLLEGSDARKIQKEEWKQRKRGGTSRFCNRVPRTPFGVRRXXXXXXXXXXXXX 210
           DLPEILY LLEGSDARK+QKE W+ RKRG  +    + PRT                   
Sbjct: 162 DLPEILYLLLEGSDARKVQKEAWQNRKRGAHNN-KKKNPRT----------QKMQKVKTK 210

Query: 211 XXXXXXXXLVXXXXXXXXXXXXXXXXXXXXXXXXLLQRYNTDPDFRSLHDRVSDHFAECL 270
                                             L++RY  DPDFR LHDRVSD+FAECL
Sbjct: 211 SLAQRVNVEKEKESSEKEIAHVAREEKRVALAKKLVERYAKDPDFRFLHDRVSDYFAECL 270

Query: 271 KRDREFLDSGSVNKISLAAKWCPSVDSSFDRSTLLCESVAKRLFPKEEY---EGVEEAHY 327
           ++D EFL SG V K+SLAAKWCPSVDSSFDR TLLCE++ KR+FP++EY   EGVEEA+Y
Sbjct: 271 RKDHEFLKSGLVTKVSLAAKWCPSVDSSFDRHTLLCETIGKRVFPRDEYKEYEGVEEAYY 330

Query: 328 AYRVRDRLRKEVLVPLRKALELPEVYIGVNRWDSLPYNRVASVAMKFYKEKFLKHDKERF 387
           AYRVRDRLRKEVLVPLRK LELPEV+IG NRWD +PYNRVASVAMKFYKEKFLKHDKERF
Sbjct: 331 AYRVRDRLRKEVLVPLRKVLELPEVFIGANRWDLIPYNRVASVAMKFYKEKFLKHDKERF 390

Query: 388 EKYLEDVKAGKTTIAAGALLPHEIIGSLRDCDGGEVAELQWNRMVDDLLKKGKMKNCIAV 447
           E YLEDVK+GK+TIAAGALLPH+IIGSL D DGG+VAELQW R+VDDLLKKGKMKNC+AV
Sbjct: 391 EAYLEDVKSGKSTIAAGALLPHQIIGSLNDGDGGDVAELQWKRIVDDLLKKGKMKNCLAV 450

Query: 448 CDVSGSMSGIPMEVSVALGLLVSELSVEPWKGKVITFSAYPEIHLIKGDDLQSKTQFVRN 507
           CDVSGSMSG+PMEVSVALGLLVSEL  EPWKGKV+TFS  P++HLI+GDDL SKT+F+RN
Sbjct: 451 CDVSGSMSGVPMEVSVALGLLVSELCEEPWKGKVVTFSENPQLHLIEGDDLGSKTEFIRN 510

Query: 508 MEWGMNTNFQRVFDLILEVAVNGKLKEDQMIKRIFVFSDMEFDEASANSWETDYQAITRK 567
           MEWGMNT+FQ+VFDL+LEVAV+G LK DQMIKR+FVFSDMEFD+ASAN WETDYQAITRK
Sbjct: 511 MEWGMNTDFQKVFDLLLEVAVSGNLKPDQMIKRLFVFSDMEFDQASANPWETDYQAITRK 570

Query: 568 YTEKGYGSAVPQIVFWNLRDSKATPVPATQKGVALVSGFSKNLLTLFLDNDGDISPEEAM 627
           + EKG+G AVPQIVFWNLRDSKATPVPATQKGVAL+SGFSKNLLTLFLD +G++SPEEAM
Sbjct: 571 FGEKGFGDAVPQIVFWNLRDSKATPVPATQKGVALLSGFSKNLLTLFLDKEGELSPEEAM 630

Query: 628 EAAISGPEYQKLVVLD 643
           EAAISGPEYQKLVVLD
Sbjct: 631 EAAISGPEYQKLVVLD 646