Miyakogusa Predicted Gene
- chr2.CM0102.210.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.CM0102.210.nd - phase: 1 /partial
(338 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g00360.1 443 e-124
Glyma04g01820.1 91 2e-18
Glyma04g01820.2 91 2e-18
Glyma06g01930.1 77 4e-14
>Glyma14g00360.1
Length = 1020
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/339 (68%), Positives = 260/339 (76%), Gaps = 3/339 (0%)
Query: 1 WQPGIQXXXXXXXXXXXXXXXXXFAVVKELTLDVKNIIAPPKQKLPPAVNKKALDVGSP- 59
WQPGIQ F VKELTLDV+NII PPKQKLP AVN KA++V +
Sbjct: 675 WQPGIQEGAADWDEDWDKLEDKEFVFVKELTLDVQNIIVPPKQKLPSAVNTKAVNVEAVN 734
Query: 60 TFAASPKSDDKKDLDVGSPTFAASPKSDDKSEKPQTTNEQGVSNGSVYNKSEDGSARSAP 119
T A + ++ + + ++ SPTF ASPKSDDKSEKP+TTNEQGV NGSVYNKSEDGS +SAP
Sbjct: 735 TEAVNVEAVNTEAVNTDSPTFVASPKSDDKSEKPRTTNEQGVGNGSVYNKSEDGSVKSAP 794
Query: 120 NSPLASSAVGSPHRDLGDADIRRTAGEDSSPHYQDAIHETQSDRGDVKSVFSEDKFFDEP 179
NSP ASSA+GSPH D D+DIR+TAGEDSS QD I ETQSD G VKSVFS DK FDEP
Sbjct: 795 NSPFASSAIGSPHGDF-DSDIRKTAGEDSSLRDQDTIQETQSDHGGVKSVFSGDKIFDEP 853
Query: 180 NWGTFDTNDDIDSVWGFNASSITNEERDLGSAGDNYFFGSGELGLNPIKTASPRAGDFFQ 239
NWGTFDTNDDIDSVWGFNASS T EERDL AG+NYFF SGELGLNPIKT SP+AGDFFQ
Sbjct: 854 NWGTFDTNDDIDSVWGFNASSFTKEERDLDRAGNNYFFDSGELGLNPIKTGSPQAGDFFQ 913
Query: 240 KSSGFSFDDXXXXXXXXXXXXXXXXXKEWLETAFDNLSRFDSFRTHDSVSLPAGETLARF 299
+SSGF FDD KEWLETAFD SRFDSFRTHDSVSLPA ET ++
Sbjct: 914 RSSGFGFDDSVPSTPLYSSSSSPQRPKEWLETAFD-FSRFDSFRTHDSVSLPARETTEQY 972
Query: 300 DSIRSSVDYDHGHGFPAFDDSDPFGSGPFRTSSESQTPR 338
DS+R+SVD+DH +GFPAFDDSDPFGSGPFRTSS++QTPR
Sbjct: 973 DSVRNSVDFDHAYGFPAFDDSDPFGSGPFRTSSDNQTPR 1011
>Glyma04g01820.1
Length = 1062
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 104/239 (43%), Gaps = 50/239 (20%)
Query: 107 YNKSEDGSARSAPNSPLASSAVGSPHRDLGDADIRRTAGEDSSPHYQDAIHETQSDRGDV 166
Y SED AR P+S S V SP +D ++ ++ D+ H
Sbjct: 783 YAHSEDDLAR-IPHSLAGRSTVESPSQDFSNSHFGKSFEADAETH--------------- 826
Query: 167 KSVFSEDKFFDEPNWGTFDTNDDIDSVWGFNASSITN--EERDLGSAGDNYFFGSGELGL 224
+ FDE WG FD NDD+DSVWGFN + + E+RD FF S + G+
Sbjct: 827 -------RSFDESTWGAFDNNDDVDSVWGFNTKTKDSDFEQRD--------FFKSDDFGI 871
Query: 225 NPIKTASPRAGDFFQKSSGFSFDDXXXXX----------XXXXXXXXXXXXKEWLETA-- 272
NP++T S FQ S F+FDD + E
Sbjct: 872 NPVRTGSTHTDGTFQTKSPFAFDDSVPATPVSKFAFDDSVPATPVSKFENSPRYSEAGDH 931
Query: 273 FDNLSRFDSFRTHDSVSLPAGETLARFDSIRSSVDYDH-GHGFPAFD---DSDPFGSGP 327
F ++SRFDSFR H+S P E L RFDSI SS D+ + H F FD S FGS P
Sbjct: 932 FFDMSRFDSFR-HESGYSPQPERLTRFDSISSSKDFGYNNHKFTRFDSISSSKDFGSNP 989
>Glyma04g01820.2
Length = 1061
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 104/239 (43%), Gaps = 50/239 (20%)
Query: 107 YNKSEDGSARSAPNSPLASSAVGSPHRDLGDADIRRTAGEDSSPHYQDAIHETQSDRGDV 166
Y SED AR P+S S V SP +D ++ ++ D+ H
Sbjct: 783 YAHSEDDLAR-IPHSLAGRSTVESPSQDFSNSHFGKSFEADAETH--------------- 826
Query: 167 KSVFSEDKFFDEPNWGTFDTNDDIDSVWGFNASSITN--EERDLGSAGDNYFFGSGELGL 224
+ FDE WG FD NDD+DSVWGFN + + E+RD FF S + G+
Sbjct: 827 -------RSFDESTWGAFDNNDDVDSVWGFNTKTKDSDFEQRD--------FFKSDDFGI 871
Query: 225 NPIKTASPRAGDFFQKSSGFSFDDXXXXX----------XXXXXXXXXXXXKEWLETA-- 272
NP++T S FQ S F+FDD + E
Sbjct: 872 NPVRTGSTHTDGTFQTKSPFAFDDSVPATPVSKFAFDDSVPATPVSKFENSPRYSEAGDH 931
Query: 273 FDNLSRFDSFRTHDSVSLPAGETLARFDSIRSSVDYDH-GHGFPAFD---DSDPFGSGP 327
F ++SRFDSFR H+S P E L RFDSI SS D+ + H F FD S FGS P
Sbjct: 932 FFDMSRFDSFR-HESGYSPQPERLTRFDSISSSKDFGYNNHKFTRFDSISSSKDFGSNP 989
>Glyma06g01930.1
Length = 1076
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 105/257 (40%), Gaps = 66/257 (25%)
Query: 107 YNKSEDGSARSAPNSPLASSAVGSPHRDLGDADIRRTAGEDSSPHYQDAIHETQSDRGDV 166
Y SED ARS P+S S +GSP RD +A ++ D+ H
Sbjct: 777 YAHSEDDLARS-PHSLAGRSTLGSPSRDFSNAHFGKSFEADAETH--------------- 820
Query: 167 KSVFSEDKFFDEPNWGTFDTNDDIDSVWGFNASSITNEERDLGSAGDNYFFGSGELGLNP 226
+ FDE WG FD N+D+DSVWGFN + ++ D GD FF S + G+NP
Sbjct: 821 -------RSFDESTWGAFDNNEDVDSVWGFNTKT---KDSDF-EQGD--FFKSDDFGINP 867
Query: 227 IKTASPRAGDFFQKSSGFSFDDXXXXXXXXXXX----------XXXXXXKEWLETA--FD 274
++T S FQ S F+FDD + E F
Sbjct: 868 VRTGSTHTDGTFQSKSPFAFDDSVPATPVSKFAFDDSVPATPVSKFGNSPRYSEAGDHFF 927
Query: 275 NLSRFDSFRTHDSVSLPAGETLARFDSIR--------------------SSVDYDHGH-G 313
++SRFDSFR H+S P E L RFDSI SS D+ + +
Sbjct: 928 DMSRFDSFR-HESGYSPQPERLTRFDSISSSSKDFGYNNDKFTRFDSISSSKDFGYNNDK 986
Query: 314 FPAFD---DSDPFGSGP 327
F FD S FG P
Sbjct: 987 FTRFDSISSSKDFGYNP 1003
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 274 DNLSRFDSFRTHDSVSLPAGETLARFDSIRSSVDYDHGHGFPAFDDSDPFGS-GPFRTSS 332
+ L+RFDS + + + ARFDSI S+ D+ H F +FDDSDPFGS GPF+ SS
Sbjct: 1004 ETLTRFDSMSSSTDLGF-GRQGHARFDSISSTKDFGHSGPF-SFDDSDPFGSSGPFKVSS 1061
Query: 333 ESQTPR 338
E+ +P+
Sbjct: 1062 ENHSPK 1067