Miyakogusa Predicted Gene

chr2.CM0065.210.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0065.210.nc + phase: 0 
         (516 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g33380.1                                                       841   0.0  
Glyma18g04850.1                                                       829   0.0  
Glyma17g08880.1                                                       684   0.0  
Glyma11g23820.1                                                        77   6e-14

>Glyma11g33380.1
          Length = 510

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/483 (84%), Positives = 449/483 (92%), Gaps = 5/483 (1%)

Query: 1   MFGSS---EEAGMFTVHRTVGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVL 57
           MFGSS   +E+GMF V++T+GSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVL
Sbjct: 1   MFGSSGMAQESGMFMVNQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVL 60

Query: 58  VHCPECESYLQPPRTWIKLQLESKELLTFCLKKLQKNMSSSKVRMVHAEFIWTEPHSKRI 117
           VHCPECESYLQPPR+W+KLQLESKELLTFCLKKLQKN++S+KVR+VHAEFIWTEPHS+R+
Sbjct: 61  VHCPECESYLQPPRSWVKLQLESKELLTFCLKKLQKNLNSNKVRLVHAEFIWTEPHSRRV 120

Query: 118 KVNVKVQKEVLNGAILEQSYLVEYVQQEHLCESCSKVAANPDQWVAAVQLRQHVSHRRTF 177
           KV VKVQKEVLNGAILEQSY VEYVQQEH+CESCS+V ANPDQWVAAVQLRQHVSHRRTF
Sbjct: 121 KVKVKVQKEVLNGAILEQSYPVEYVQQEHMCESCSRVQANPDQWVAAVQLRQHVSHRRTF 180

Query: 178 FYLEQLILKHGAAASAIRIKQMDEGIDFYFSNRSHGVKFVEFIGKVAPIKSRSDKQLVSH 237
           FYLEQLILKHGAAA+AIRIKQM++GIDF+FSNRSHGVKFVEFIGKV+P++SR DKQLVSH
Sbjct: 181 FYLEQLILKHGAAATAIRIKQMEQGIDFFFSNRSHGVKFVEFIGKVSPVRSRHDKQLVSH 240

Query: 238 DTKSNEYNYKHTFSVEISPICREDLICLPPKVALSLGNLGPIVICTKVTNSIALLDPFTL 297
           D KSN YNYK+TFSVEISPICREDLICLPP+VA+SLGN+GP+VICTKVTNSIALLDPFTL
Sbjct: 241 DPKSNNYNYKYTFSVEISPICREDLICLPPRVAVSLGNIGPLVICTKVTNSIALLDPFTL 300

Query: 298 RYCFLDADQYWRSSFKSLLTSRQLVEYIVLDXXXXXXXXXXXXXKYVLADAQVARVSDFG 357
           R+CF+DADQYWR+SFKSLLTSRQLVEYIVLD             KY LADAQVARVSDFG
Sbjct: 301 RHCFIDADQYWRTSFKSLLTSRQLVEYIVLDVETVSSEVTIGGTKYRLADAQVARVSDFG 360

Query: 358 KNDTIFSIKTHLGHLLNPGDYALGYDLYGANNNDIELDKYKGLILPDAILVKKSYEEKRQ 417
           KNDTIF+IKTHLGHLLNPGDYALGYDLYGAN+ND+ELDKYKG I P+AIL+KKSYEEK Q
Sbjct: 361 KNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDMELDKYKGHI-PEAILIKKSYEEKHQ 419

Query: 418 KKRGKARSWKLKSLNMEVDDKVARADPDKMHSEYEQFLKDLEENPDLRFNISLYRNKEYQ 477
           KKRGK RSWKLKSL MEVDDK  R D DKM SEYEQF++DLEENP++RFNISLYRNKEY+
Sbjct: 420 KKRGKPRSWKLKSLEMEVDDK-GRVDEDKMVSEYEQFIQDLEENPEMRFNISLYRNKEYK 478

Query: 478 PSE 480
           PS+
Sbjct: 479 PSD 481


>Glyma18g04850.1
          Length = 504

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/476 (84%), Positives = 441/476 (92%), Gaps = 2/476 (0%)

Query: 5   SEEAGMFTVHRTVGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPECE 64
           ++E+GMF V +T+GSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPECE
Sbjct: 2   AQESGMFMVSQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPECE 61

Query: 65  SYLQPPRTWIKLQLESKELLTFCLKKLQKNMSSSKVRMVHAEFIWTEPHSKRIKVNVKVQ 124
           SYLQPPR+W+KLQLESKELLTFCLKKLQKN++S+KVR+VHAEFIWTEPHS+R+KV VKVQ
Sbjct: 62  SYLQPPRSWVKLQLESKELLTFCLKKLQKNLNSNKVRLVHAEFIWTEPHSRRVKVKVKVQ 121

Query: 125 KEVLNGAILEQSYLVEYVQQEHLCESCSKVAANPDQWVAAVQLRQHVSHRRTFFYLEQLI 184
           KEVLNGAILEQSY VEYVQQEH+CESCS+V ANPDQWVA+VQLRQHVSHRRTFFYLEQLI
Sbjct: 122 KEVLNGAILEQSYPVEYVQQEHMCESCSRVQANPDQWVASVQLRQHVSHRRTFFYLEQLI 181

Query: 185 LKHGAAASAIRIKQMDEGIDFYFSNRSHGVKFVEFIGKVAPIKSRSDKQLVSHDTKSNEY 244
           LKHGAAA+AIRIKQM++GIDF+FSNRSHGVKFVEFIGKVAP++SR DKQLVSHD KSN Y
Sbjct: 182 LKHGAAATAIRIKQMEQGIDFFFSNRSHGVKFVEFIGKVAPVRSRHDKQLVSHDPKSNNY 241

Query: 245 NYKHTFSVEISPICREDLICLPPKVALSLGNLGPIVICTKVTNSIALLDPFTLRYCFLDA 304
           NYK+TFSVEISPICREDLICLPP+VA  LGN+GP+VICTKVT+SIALLDPFTLR+CF+DA
Sbjct: 242 NYKYTFSVEISPICREDLICLPPRVAAGLGNIGPLVICTKVTSSIALLDPFTLRHCFIDA 301

Query: 305 DQYWRSSFKSLLTSRQLVEYIVLDXXXXXXXXXXXXXKYVLADAQVARVSDFGKNDTIFS 364
           DQYWR+SFKSLLTSRQLVEYIVLD             KY LADAQVARVSDFGKNDTIF+
Sbjct: 302 DQYWRASFKSLLTSRQLVEYIVLDVETVSSEVTIGGTKYRLADAQVARVSDFGKNDTIFN 361

Query: 365 IKTHLGHLLNPGDYALGYDLYGANNNDIELDKYKGLILPDAILVKKSYEEKRQKKRGKAR 424
           IKTHLGHLLNPGDYALGYDLYGAN+ND+E DKYKG I P+AIL+KKSYEEK QKKRGK R
Sbjct: 362 IKTHLGHLLNPGDYALGYDLYGANSNDMEFDKYKGHI-PEAILIKKSYEEKHQKKRGKPR 420

Query: 425 SWKLKSLNMEVDDKVARADPDKMHSEYEQFLKDLEENPDLRFNISLYRNKEYQPSE 480
           SWKLKSL MEVDDK  R D DKM SEYEQF++DLEENP++RFNISLYRNKEY+PS+
Sbjct: 421 SWKLKSLEMEVDDK-GRVDQDKMVSEYEQFIQDLEENPEMRFNISLYRNKEYKPSD 475


>Glyma17g08880.1
          Length = 410

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/422 (80%), Positives = 375/422 (88%), Gaps = 12/422 (2%)

Query: 50  GLLKRLVLVHCPECESYLQPPRTWIKLQLESKELLTFCLKKLQKNMSSSKVRMVHAEFIW 109
           GLLK LVLVHCPECESYLQPPR+W+KLQLESKELLTFCLKKLQKN++S+KVR+VHAEFIW
Sbjct: 1   GLLKCLVLVHCPECESYLQPPRSWVKLQLESKELLTFCLKKLQKNLNSNKVRLVHAEFIW 60

Query: 110 TEPHSKRIKVNVKVQKEVLNGAILEQSYLVEYVQQEHLCESCSKVAANPDQWVAAVQLRQ 169
           TEPHS+R+KV VKVQKEVLNGAILEQSY VEYVQQEH+CESCS+V ANPDQWVAAVQLRQ
Sbjct: 61  TEPHSRRVKVKVKVQKEVLNGAILEQSYPVEYVQQEHMCESCSRVQANPDQWVAAVQLRQ 120

Query: 170 HVSHRRTFFYLEQLILKHGAAASAIRIKQMDEGIDFYFSNRSHGVKFVEFIGKVAPIKSR 229
           HVSHRRTFFYLEQLILKHGAAA+AIRIKQM++GIDF+FSNR           KVAP++S 
Sbjct: 121 HVSHRRTFFYLEQLILKHGAAATAIRIKQMEQGIDFFFSNRR----------KVAPLRSH 170

Query: 230 SDKQLVSHDTKSNEYNYKHTFSVEISPICREDLICLPPKVALSLGNLGPIVICTKVTNSI 289
            DKQLVSHD KSN YNYK+TFSVEISPICREDLIC+PP+VA  LGN+GP+VICTKVTNSI
Sbjct: 171 HDKQLVSHDPKSNNYNYKYTFSVEISPICREDLICVPPRVAAGLGNIGPLVICTKVTNSI 230

Query: 290 ALLDPFTLRYCFLDADQYWRSSFKSLLTSRQLVEYIVLDXXXXXXXXXXXXXKYVLADAQ 349
           ALLDPFTLR+CF+DADQYWR+SFKSLLTSRQLVEYIVLD             KY LADAQ
Sbjct: 231 ALLDPFTLRHCFIDADQYWRASFKSLLTSRQLVEYIVLDVETVSSEVTIGDTKYRLADAQ 290

Query: 350 VARVSDFGKNDTIFSIKTHLGHLLNPGDYALGYDLYGANNNDIELDKYKGLILPDAILVK 409
           VAR+SDFGKNDTIF+IKTHLGHLLNPGDYALGYDL GAN+ND+ELDKYKG I P+AIL+K
Sbjct: 291 VARISDFGKNDTIFNIKTHLGHLLNPGDYALGYDLCGANSNDMELDKYKGHI-PEAILIK 349

Query: 410 KSYEEKRQKKRGKARSWKLKSLNMEVDDKVARADPDKMHSEYEQFLKDLEENPDLRFNIS 469
           KSYEEK QKKRGK RSWKLKSL MEVDDK  R D  KM SEYEQF++DLEENP++RFNIS
Sbjct: 350 KSYEEKHQKKRGKPRSWKLKSLEMEVDDK-GRVDQGKMVSEYEQFIQDLEENPEMRFNIS 408

Query: 470 LY 471
           LY
Sbjct: 409 LY 410


>Glyma11g23820.1
          Length = 74

 Score = 76.6 bits (187), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/67 (67%), Positives = 53/67 (79%)

Query: 67  LQPPRTWIKLQLESKELLTFCLKKLQKNMSSSKVRMVHAEFIWTEPHSKRIKVNVKVQKE 126
           LQPPR+W +     K      LKKLQKN++S+KVR+VHAEFIWTEPHS+R+KV VKVQKE
Sbjct: 1   LQPPRSWGQATAGVKGATDILLKKLQKNLNSNKVRLVHAEFIWTEPHSRRVKVKVKVQKE 60

Query: 127 VLNGAIL 133
           VLNGA L
Sbjct: 61  VLNGAYL 67