Miyakogusa Predicted Gene

chr1.LjT38A19.110.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.LjT38A19.110.nc - phase: 0 
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g30040.1                                                       130   3e-31
Glyma19g32920.1                                                       129   1e-30
Glyma09g17200.1                                                        89   2e-18

>Glyma03g30040.1
          Length = 152

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 85/124 (68%), Gaps = 18/124 (14%)

Query: 1   MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVS 60
           MQG KKA E++KETAANIGASAK+G EKTKATVQEKAE++TA DP+QKE+ATQKKEAK+S
Sbjct: 1   MQGGKKAGESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMS 60

Query: 61  QAELDKLAAREHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPMGAHQTSALPGHGT 120
           QAELDK AAR+HN                               QPMG HQTSA+PGHGT
Sbjct: 61  QAELDKQAARQHN------------------TAAKQAATAGHMGQPMGTHQTSAMPGHGT 102

Query: 121 GHNT 124
           G  T
Sbjct: 103 GQPT 106


>Glyma19g32920.1
          Length = 173

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/129 (58%), Positives = 85/129 (65%), Gaps = 5/129 (3%)

Query: 1   MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVS 60
           MQG KKA E++KETA NIGASAK+G EKTKATVQEKAE++TA DPVQKE+ATQKKEAK++
Sbjct: 1   MQGGKKAGESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMN 60

Query: 61  QAELDKLAAREHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXQPMGAHQTSAL 115
           QAELDK AAR+HN                                    QPMGAHQTSA+
Sbjct: 61  QAELDKQAARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAM 120

Query: 116 PGHGTGHNT 124
           PGHGTG  T
Sbjct: 121 PGHGTGQPT 129


>Glyma09g17200.1
          Length = 222

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 59/72 (81%)

Query: 1  MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVS 60
          MQ AKKA ET KETAANIGASAKSG EKTKAT+QEK EK+ A D  Q +MAT++KE K++
Sbjct: 1  MQAAKKAIETFKETAANIGASAKSGLEKTKATIQEKNEKMNAEDQTQMDMATKRKEEKIN 60

Query: 61 QAELDKLAAREH 72
          QAE++K  AR++
Sbjct: 61 QAEMEKQQARKY 72