Miyakogusa Predicted Gene

chr1.CM0955.30.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0955.30.nd + phase: 1 /partial
         (297 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g16630.1                                                       129   4e-30
Glyma06g16630.3                                                       107   2e-23
Glyma06g16630.2                                                       107   2e-23

>Glyma06g16630.1
          Length = 334

 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 1/78 (1%)

Query: 7   VTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKTWNRPYS 66
           V K VETYFNYGKQN+ESL  LFITLLVKLASVE+LWQ+G CAS+YEGSWILK+W   YS
Sbjct: 246 VAKVVETYFNYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYS 305

Query: 67  MRQIEDFMDRSQNVARAV 84
           M  +EDF+DRSQNVARAV
Sbjct: 306 M-SVEDFIDRSQNVARAV 322


>Glyma06g16630.3
          Length = 324

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/65 (75%), Positives = 55/65 (84%)

Query: 7   VTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKTWNRPYS 66
           V K VETYFNYGKQN+ESL  LFITLLVKLASVE+LWQ+G CAS+YEGSWILK+W   YS
Sbjct: 254 VAKVVETYFNYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYS 313

Query: 67  MRQIE 71
           M  I+
Sbjct: 314 MSVIK 318


>Glyma06g16630.2
          Length = 316

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/65 (75%), Positives = 55/65 (84%)

Query: 7   VTKNVETYFNYGKQNEESLTKLFITLLVKLASVESLWQQGICASVYEGSWILKTWNRPYS 66
           V K VETYFNYGKQN+ESL  LFITLLVKLASVE+LWQ+G CAS+YEGSWILK+W   YS
Sbjct: 246 VAKVVETYFNYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYS 305

Query: 67  MRQIE 71
           M  I+
Sbjct: 306 MSVIK 310