Miyakogusa Predicted Gene

chr1.CM0496.70.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0496.70.nd - phase: 0 /partial
         (909 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g41520.1                                                       856   0.0  
Glyma06g13300.1                                                       847   0.0  

>Glyma04g41520.1
          Length = 1161

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/546 (77%), Positives = 455/546 (83%), Gaps = 4/546 (0%)

Query: 368 GSHVDDRSARGKESGTKXXXXXXXXXXXXXXXRAVKSYYPDAEKRTLSSNRADSDVDRGR 427
           GSHVDDRS RGKESGTK               RAVKSYYPDAEKR+LS++RA+SDVDRGR
Sbjct: 369 GSHVDDRSGRGKESGTKKRTLDDRDDYSDSKSRAVKSYYPDAEKRSLSTSRAESDVDRGR 428

Query: 428 SQSRHAHADSTGTSNKHRSSPASNTHIGKDEHRNANAEDSKYRDSTVEQRTKSSREGYSG 487
           SQ R AHADS+GTSNKHRSSPASNTHIGKD++RNA AEDSKYRD +VEQRTK SREGYSG
Sbjct: 429 SQPRQAHADSSGTSNKHRSSPASNTHIGKDDYRNAKAEDSKYRDPSVEQRTKGSREGYSG 488

Query: 488 ISDRGPKYKSMDKPIKIDECPAGDLSTERSSSAKASPMGLIERSPSSTSIERRYVNKSGV 547
            SDRGPKYK M+KPIKIDECPAGDLSTERSSSAKASP GL+ERSPSSTSIERRYVN+S V
Sbjct: 489 TSDRGPKYKLMEKPIKIDECPAGDLSTERSSSAKASPGGLMERSPSSTSIERRYVNRSSV 548

Query: 548 KRNLEIDESGRRSSNDGRDFSTSDDRHGRELTLEK--LDEPSQADSSFYSRTNQSNPPVI 605
           KRNLEIDESGRR+S D RDFSTSDDR G E TLEK  LDEPSQADSS Y RTNQSN  +I
Sbjct: 549 KRNLEIDESGRRNSTDVRDFSTSDDRLGWESTLEKPLLDEPSQADSSLYGRTNQSNASLI 608

Query: 606 PTPPGFRTALDRPFTGSMEDDVRDNSNTRYRRSSEHGFGRMHGGNSWRAVPNWTSXXXXX 665
           P PPGFR  LDRP+ GS+EDDVRDNSN+RYRRSSE GFGR HGGNSWRAVPNW S     
Sbjct: 609 PPPPGFRATLDRPYMGSLEDDVRDNSNSRYRRSSEPGFGRGHGGNSWRAVPNWNSPVPNG 668

Query: 666 XXXXXXXXXXXXXQAMMPQFASQPLFGIRAPMEVNHAGIPYHIADADRFPGHLRPLGWPN 725
                        Q M+PQF SQ LFG+R PMEVNHAGIPYHIADADRFPGHLRPLGW N
Sbjct: 669 FVPFPPGPAHGGFQTMVPQFTSQSLFGVRPPMEVNHAGIPYHIADADRFPGHLRPLGWQN 728

Query: 726 MMDGTGPAHLHGWDNSNGVFRDDTQMYGGSDWDRNRHSTNSHGWESGSETWKEQNSDSKK 785
           +MDGTG AHLHGWDN+NGVFRDD  MYGGSDWDRNRHSTNSHGWESGSETWKEQN DSKK
Sbjct: 729 LMDGTGTAHLHGWDNNNGVFRDDPHMYGGSDWDRNRHSTNSHGWESGSETWKEQNCDSKK 788

Query: 786 DLPSPACKDESVPAVVDNGLTDQTIRMSQDEHNRDEFHDKSPETKLTSVNSPEKVPLNSS 845
           +LPSPACKDE  PA+VDNGLTDQT +MSQDEHNR+E  +KSPE KL+ ++SP +VPLNSS
Sbjct: 789 ELPSPACKDEPDPALVDNGLTDQTSQMSQDEHNREELVEKSPERKLSGLSSPAEVPLNSS 848

Query: 846 PTAALEKVPDTSTPSDNTTLLSRFYLSKLDISVDLVLPELYDQCMYTLNIGKPV--DAVA 903
            +  L+KVPDTS P DNT+L SRFYLSKLDISVDLVLPELYDQCM  LNI K    DAVA
Sbjct: 849 SSTVLKKVPDTSMPIDNTSLFSRFYLSKLDISVDLVLPELYDQCMCALNIDKNATGDAVA 908

Query: 904 STELLL 909
           +TELLL
Sbjct: 909 NTELLL 914



 Score =  189 bits (479), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/282 (51%), Positives = 155/282 (54%), Gaps = 16/282 (5%)

Query: 26  VKDRRSSKEDGGSGVKASKDSGSGEKRRLDSKDAAAAAHGNGEYSDEYASSSKXXXXXXX 85
            KDRRS +E GG G K  KDS S EKRR DSKDA    HGNGEYSDEYASSSK       
Sbjct: 29  AKDRRSKEESGGGGAK--KDSSSAEKRRPDSKDA----HGNGEYSDEYASSSKRRKDGGG 82

Query: 86  XXXXXXXXXXXXSKKSKTVGDSKXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXX 139
                       SKKSKTVGDSK                                     
Sbjct: 83  GGDRWNGGEEG-SKKSKTVGDSKSRRRDGSVGVYGEGEEVKRSSGKGDGKHRDSASGRIR 141

Query: 140 EGVAEKEKERKLKDG-RSEESVEIDDQDQRLSKQVFENNDSKKIDELRSPELDNQLEXXX 198
           EG AEKEKERK K+G RSEESV  D+Q+QR+SKQVFE NDSKKIDEL+ PE DNQLE   
Sbjct: 142 EGAAEKEKERKFKEGGRSEESV--DEQEQRVSKQVFEINDSKKIDELQGPEPDNQLERRT 199

Query: 199 XXXXXXXXXXXXXXXXVGDGYDRRLSSXXXXXXXXXXXXXXXXXXXXXXXXXEEMDRENK 258
                            GDGYDR LSS                         EE+DR+NK
Sbjct: 200 RKKRDDYSDGDKHQDNAGDGYDRHLSSRDDIAKDGKKKDDRRKEEKHRDKYREEIDRDNK 259

Query: 259 HRHDKQRDERPAKDHTSIRSDDKYTREEKNSLESRQKRTKHP 300
           HRHDKQ DERPAKDHT+IRSDDK+ REEKNSLESRQKRT+ P
Sbjct: 260 HRHDKQHDERPAKDHTTIRSDDKHAREEKNSLESRQKRTRLP 301


>Glyma06g13300.1
          Length = 1162

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/547 (76%), Positives = 456/547 (83%), Gaps = 5/547 (0%)

Query: 368 GSHVDDRSARGKESGTKXXXXXXXXXXXXXXXRAVKSYYPDAEKRTLSSNRADSDVDRGR 427
           GSHVDDRS RGKESGTK               RAVKSYY D++KR+LS++RA+SDVDRGR
Sbjct: 369 GSHVDDRSGRGKESGTKKRTLDDRDDYSDSKSRAVKSYYLDSDKRSLSTSRAESDVDRGR 428

Query: 428 SQSRHAHADSTGTSNKHRSSPASNTHIGKDEHRNANAEDSKYRDSTVEQRTKSSREGYSG 487
           SQ + AHADS+GTSNKHRSSPASNTHIGKD++RNA AEDSKYRD +VEQRTK SREGYSG
Sbjct: 429 SQPQQAHADSSGTSNKHRSSPASNTHIGKDDYRNAKAEDSKYRDPSVEQRTKGSREGYSG 488

Query: 488 ISDRGPKYKSMDKPIKIDECPAGDLSTERSSSAKASPMGLIERSPSSTSIERRYVNKSGV 547
            SDRG KYK M+KPIKIDE PAGDLSTERSSSAKASP  L+ERSPSSTSIERRYVN+S V
Sbjct: 489 TSDRGSKYKLMEKPIKIDEFPAGDLSTERSSSAKASPGALMERSPSSTSIERRYVNRSSV 548

Query: 548 KRNLEIDESGRRSSNDGRDFSTSDDRHGRELTLEK--LDEPSQADSSFYSRTNQSNPPVI 605
           KRNLEIDESGRR+S + RDFS SDDR GRE TLEK  LDEPSQADSS Y RTNQSN P+I
Sbjct: 549 KRNLEIDESGRRNSTNVRDFSASDDRLGRESTLEKPLLDEPSQADSSLYGRTNQSNAPLI 608

Query: 606 PTPPGFRTALDRPFTGSMEDDVRDNSNTRYRRSSEHGFGRMHGGNSWRAVPNWTSXXXXX 665
             PPGFR  LDRP+ GS+EDDVRDNSN+RYRRSSE GFGR HGGNSWRAVPNW S     
Sbjct: 609 SPPPGFRATLDRPYMGSLEDDVRDNSNSRYRRSSEPGFGRGHGGNSWRAVPNWNSPVPNG 668

Query: 666 XXXXXXXXXXXXXQAMMPQFASQPLFGIRAPMEVNHAGIPYHIADADRFPGHLR-PLGWP 724
                        Q M+PQF SQPLFG+R PMEVNHAGIPYHIADADRFPGHLR PLGWP
Sbjct: 669 YVPFPPGPAHGGFQTMVPQFTSQPLFGVRPPMEVNHAGIPYHIADADRFPGHLRPPLGWP 728

Query: 725 NMMDGTGPAHLHGWDNSNGVFRDDTQMYGGSDWDRNRHSTNSHGWESGSETWKEQNSDSK 784
           N+MDGTG AHLHGWDN+NGVFRDD  MYGGSDWDRNRHSTNSHGWESGSETWKEQ+ DSK
Sbjct: 729 NLMDGTGAAHLHGWDNNNGVFRDDPHMYGGSDWDRNRHSTNSHGWESGSETWKEQSCDSK 788

Query: 785 KDLPSPACKDESVPAVVDNGLTDQTIRMSQDEHNRDEFHDKSPETKLTSVNSPEKVPLNS 844
           K+LPSPA KDESVPA+VDNGL+DQT +MSQDEHNRDE  +KSPE KL+S+ SP +VPLNS
Sbjct: 789 KELPSPAYKDESVPALVDNGLSDQTSQMSQDEHNRDELAEKSPERKLSSLTSPAEVPLNS 848

Query: 845 SPTAALEKVPDTSTPSDNTTLLSRFYLSKLDISVDLVLPELYDQCMYTLNIGK--PVDAV 902
           S +  LEKVPDTS PSDNT+L SRFYLSKLDISVDLVLPELYDQCM  LN+ K   VDAV
Sbjct: 849 SSSTVLEKVPDTSMPSDNTSLFSRFYLSKLDISVDLVLPELYDQCMCALNMDKNASVDAV 908

Query: 903 ASTELLL 909
           ASTELLL
Sbjct: 909 ASTELLL 915



 Score =  192 bits (489), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/284 (50%), Positives = 154/284 (54%), Gaps = 18/284 (6%)

Query: 26  VKDRRSSKEDGGSGVKASKDSGSGEKRRLDSKDAAAAAHGNGEYSDEYASSSKXXXXXXX 85
            KDRRS +E GG    A KDS S EKRRLDSKDA    HGNGEYSDEYASSSK       
Sbjct: 29  AKDRRSKEESGGG---AKKDSSSAEKRRLDSKDA----HGNGEYSDEYASSSKRRKDGGG 81

Query: 86  XXXXXXXXXXXXSKKSKTVGDSKXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXX 139
                       SKKSKT GDSK                                     
Sbjct: 82  GGGDRWNGGEEGSKKSKTAGDSKSRRRDGSVGVYGEGEEVKKSSGKGDGKHRDSASGRGR 141

Query: 140 EGVAEKEKERKLKD---GRSEESVEIDDQDQRLSKQVFENNDSKKIDELRSPELDNQLEX 196
           EG AEKEKE++ K    GRSEESV  D+Q+QR+SKQVFE N+SKKIDELRSPE DNQLE 
Sbjct: 142 EGAAEKEKEKERKFKEGGRSEESV--DEQEQRVSKQVFEINESKKIDELRSPEPDNQLER 199

Query: 197 XXXXXXXXXXXXXXXXXXVGDGYDRRLSSXXXXXXXXXXXXXXXXXXXXXXXXXEEMDRE 256
                             V DGYDR LSS                         EE+ RE
Sbjct: 200 RMRKKRDDYSDGDKHQDNVEDGYDRHLSSRDDIAKDGKKKDDRRKEEKYRDKYREEIGRE 259

Query: 257 NKHRHDKQRDERPAKDHTSIRSDDKYTREEKNSLESRQKRTKHP 300
           NKHRHDKQRDERPAKDHT+IRSDDK+ REEKNSLESRQKRTK P
Sbjct: 260 NKHRHDKQRDERPAKDHTTIRSDDKHAREEKNSLESRQKRTKLP 303