Miyakogusa Predicted Gene

chr6.CM0420.270.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr6.CM0420.270.nd + phase: 0 
         (419 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC156828_22.4 Protein of unknown function chr02_pseudomolec...   640   0.0  
IMGA|CT025534_13.4 Protein of unknown function chr03_pseudomolec...   324   5e-89
IMGA|AC149038_17.5 Protein of unknown function chr07_pseudomolec...   148   4e-36

>IMGA|AC156828_22.4 Protein of unknown function
           chr02_pseudomolecule_IMGAG_V2 11779148-11776416 H
           EGN_Mt071002 20080227
          Length = 439

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/405 (77%), Positives = 340/405 (83%), Gaps = 18/405 (4%)

Query: 1   MASPNKYFSHYEGIYTNLHEPALIIAGCXXXXXXXXXXXXXXQHLRSYTKP--------- 51
           MAS   +FS+YEGIY  +H+PALI+AGC              QHLRSYT P         
Sbjct: 1   MAS--NHFSNYEGIYNIVHQPALIVAGCSVLVALVLSLFLIFQHLRSYTNPSEIGTTSAN 58

Query: 52  ------EEQKWIVAVISMVPIYATESIISLWNPKLSLACDILRNYYEAFALYSFGRYLIA 105
                 +EQKWIVAVISMVPIYATESIISLWNP+LSLACDILRNYYEAFALYSFGRYLI+
Sbjct: 59  SKLVYLQEQKWIVAVISMVPIYATESIISLWNPRLSLACDILRNYYEAFALYSFGRYLIS 118

Query: 106 CLGGEGRVVELLEDESGGHLRKPLLNGLDENRSTEDRSFCNFFWRPCKLGKDLLAIQKFG 165
           CLGGE +VVELLEDES  HL KPLL+  DEN  TE RSFCNFFW PC+LGKDLLAI+KFG
Sbjct: 119 CLGGERKVVELLEDESEEHLEKPLLHDSDENNGTEQRSFCNFFWHPCRLGKDLLAIEKFG 178

Query: 166 LVQYMILKTVCAFLALILELCGVYGDGEFKWYYGYPYIAAVLNFSQMWALYCLVQFYNVT 225
           LVQYMILKTVCAFLA+ILEL GVYGDGEFKWYYGYPY+A VLNFSQ+WALYCLVQFYNVT
Sbjct: 179 LVQYMILKTVCAFLAMILELFGVYGDGEFKWYYGYPYMAVVLNFSQIWALYCLVQFYNVT 238

Query: 226 HERLQPIKPLAKFISFKAIVFATWWQGVGIVLLCTFGVLPQQEKLQTGLQDFLICIEMAI 285
           HERLQPIKPLAKFISFKAIVFATWWQGVGI LLCTF VLP   KLQTGLQDFLICIEMAI
Sbjct: 239 HERLQPIKPLAKFISFKAIVFATWWQGVGIALLCTFRVLPNDGKLQTGLQDFLICIEMAI 298

Query: 286 AAIAHVFVFSAKPYYLLPAASACGKVTKETTEAAIAINEGDEQKPAALLKETTTEVEAPR 345
           AA+AHVFVFSAKPY  +P +SA G+VTKET EA + I+EG E KP A+LKETTT+VEAPR
Sbjct: 299 AAVAHVFVFSAKPYNFVPVSSAHGRVTKETIEATLDIDEGGEHKP-AVLKETTTQVEAPR 357

Query: 346 TSVKESVQDIVVGGGQRVVNDVVLTINQAIGPVEKGVTRIQQTFH 390
           TSVKESVQDIVV GGQRVV DV LTINQAIGPVEKGVT+IQ+TFH
Sbjct: 358 TSVKESVQDIVVEGGQRVVKDVALTINQAIGPVEKGVTKIQKTFH 402


>IMGA|CT025534_13.4 Protein of unknown function
           chr03_pseudomolecule_IMGAG_V2 32683817-32689993 E
           EGN_Mt071002 20080227
          Length = 480

 Score =  324 bits (830), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 172/357 (48%), Positives = 232/357 (64%), Gaps = 16/357 (4%)

Query: 48  YTKPEEQKWIVAVISMVPIYATESIISLWNPKLSLACDILRNYYEAFALYSFGRYLIACL 107
           Y  PEEQK+++ VI MVP Y+ ES +SL NP +S+ C ILR+ YE+FA+Y FGRYL+ACL
Sbjct: 38  YKNPEEQKFLIGVILMVPCYSIESFVSLVNPSISVDCAILRDCYESFAMYCFGRYLVACL 97

Query: 108 GGEGRVVELLEDESGGHLRKPLLNGLDENRS---TEDRSFCNFFWRPCKLGKDLLAIQKF 164
           GGE R ++ +E E     + PLL     + S    +      +F +P  LG     I KF
Sbjct: 98  GGEDRTLDFMEKEGRATFKTPLLRHYHSSHSPGIVKHPFPIKYFLKPWILGPRFYQIVKF 157

Query: 165 GLVQYMILKTVCAFLALILELCGVYGDGEFKWYYGYPYIAAVLNFSQMWALYCLVQFYNV 224
           G+VQYMI+K+  A LA+ILE  GVY +GEFK   GYPY+A VLNFSQ WALYCLVQFY V
Sbjct: 158 GIVQYMIIKSFTAILAVILEAFGVYCEGEFKLGCGYPYVAVVLNFSQSWALYCLVQFYTV 217

Query: 225 THERLQPIKPLAKFISFKAIVFATWWQGVGIVLLCTFGV----LPQQEKLQTGLQDFLIC 280
           T + L  IKPLAKF++FK+IVF TWWQGV I LL TFG+    + Q  + ++ +QDF+IC
Sbjct: 218 TKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYTFGLFKSPIAQGLQFKSSVQDFIIC 277

Query: 281 IEMAIAAIAHVFVFSAKPYYL----LPAA-SACGKVTKETTEAAIAINEGDEQKPAALLK 335
           IEM IA+I H++VF AKPY L    LP + S  G  + +       I   D ++P   L+
Sbjct: 278 IEMGIASIVHLYVFPAKPYELMGDRLPGSVSVLGDYSADCPLDPDEIR--DSERPTK-LR 334

Query: 336 ETTTEVEAPR-TSVKESVQDIVVGGGQRVVNDVVLTINQAIGPVEKGVTRIQQTFHH 391
               +V+A    +++ESV+D+V+GGG  +V DV  T++QA+ PVEKG+TR  +  + 
Sbjct: 335 LPAPDVDAKSGMTIRESVRDVVIGGGGYIVKDVKFTVHQAVEPVEKGITRFNEKLYR 391


>IMGA|AC149038_17.5 Protein of unknown function
           chr07_pseudomolecule_IMGAG_V2 28770731-28764454 F
           EGN_Mt071002 20080227
          Length = 420

 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 135/257 (52%), Gaps = 17/257 (6%)

Query: 43  QHLRSYTKPEEQKWIVAVISMVPIYATESIISLWNPKLSLACDILRNYYEAFALYSFGRY 102
           +HL +YT+P  Q++IV ++ MVP+YA  S +SL  P+LS+  + +R  YEA+ +Y+F   
Sbjct: 30  RHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPRLSIYFNSIREVYEAWVIYNFLSL 89

Query: 103 LIACLGGEGRVVELLEDESGGHLRKPLLNGLDENRSTEDRSFCNFFWRPCKLGKDLLAIQ 162
            +A +GG G VV  L     G + KP         S    + C   + P  L    +   
Sbjct: 90  CLAWVGGPGSVVISLS----GRVLKP---------SVCLMTCC---FPPIPLDGRFIRKC 133

Query: 163 KFGLVQYMILKTVCAFLALILELCGVYGDGEFKWYYGYPYIAAVLNFSQMWALYCLVQFY 222
           K G +Q++ILK +   + LIL   G Y DG F     Y Y+  +  FS   ALY L  FY
Sbjct: 134 KQGCLQFVILKPILVVVTLILYAKGKYKDGNFNPKQSYLYLTIIYTFSYTMALYALALFY 193

Query: 223 NVTHERLQPIKPLAKFISFKAIVFATWWQGVGIVLLCTFGVLPQQEKLQTGLQDFLICIE 282
               + LQP  P+ KFI  K++VF T+WQGV   L    G + Q       LQ+F+IC+E
Sbjct: 194 VACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFI-QDADEAALLQNFIICVE 252

Query: 283 MAIAAIAHVFVFSAKPY 299
           M IAA+ H + F  K Y
Sbjct: 253 MLIAAVGHFYAFPYKEY 269