Miyakogusa Predicted Gene
- chr6.CM0055.330.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr6.CM0055.330.nc - phase: 0 /partial
(340 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC148971_40.4 Dynamin central region; Dynamin; Dynamin GTPa... 488 e-138
IMGA|AC202479_17.3 Dynamin central region; Dynamin; Dynamin GTPa... 362 e-100
IMGA|AC174339_26.4 Dynamin central region; Dynamin; Dynamin GTPa... 362 e-100
>IMGA|AC148971_40.4 Dynamin central region; Dynamin; Dynamin GTPase
effector chr02_pseudomolecule_IMGAG_V2 2071528-2083206 E
EGN_Mt071002 20080227
Length = 835
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/335 (74%), Positives = 268/335 (80%), Gaps = 4/335 (1%)
Query: 8 NIISSIGALEMDYINTSHPNFIGGSRALEFAVQQTKSSRAALSVSRQKDGLESDKGSASE 67
N+I+ I +EMDYINTSHPNFIGGS+ALE AVQQTKSSRAALS+SR KD LES+KGSASE
Sbjct: 502 NMIAHIMEMEMDYINTSHPNFIGGSKALEIAVQQTKSSRAALSLSRPKDALESEKGSASE 561
Query: 68 RSVKSRAILARQSNGVAGDQGVRAVSEIEKIAPXXXXXXXXXXXXXXXXXXXXRMSVKEN 127
R+VKSRAILARQ+NGV D VRAVS+ EKIA S +EN
Sbjct: 562 RTVKSRAILARQANGVVVDPAVRAVSDAEKIASSGNIGGSSWGISSIFGGGDK--SAREN 619
Query: 128 IASKPHTEPVHSVE--QSFSMIHLREPPTILRPSESNSETEAIEITVTKLLLKSYYDIVR 185
+ASK H EP HSVE QSFSMIHL EPPTILRPS+SNSETEA+EITVTKLLLKSYYDIVR
Sbjct: 620 VASKQHAEPFHSVEVEQSFSMIHLTEPPTILRPSDSNSETEAVEITVTKLLLKSYYDIVR 679
Query: 186 KNVEDFIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPEEIAMKRKRCRELLRA 245
KNVEDF+PKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEP+EIA KRKRCRELLRA
Sbjct: 680 KNVEDFVPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPDEIASKRKRCRELLRA 739
Query: 246 YQQAFKDLEELPMEAETVERGYSLPETTGLPKIHXXXXXXXXXXXXXXXXXXXXPKHTKS 305
YQQAFKDLEELPMEAET+ERGYSLPETTGLPKIH PKH KS
Sbjct: 740 YQQAFKDLEELPMEAETLERGYSLPETTGLPKIHGLPTSSMYSTNSSGDYYGASPKHPKS 799
Query: 306 KRSSHSGELQSPLYANADSNGSGRTYPSGYYPTVD 340
KRSSHSGELQSP YANADSNG+G+ SG+YPT+D
Sbjct: 800 KRSSHSGELQSPFYANADSNGNGKQSASGFYPTLD 834
>IMGA|AC202479_17.3 Dynamin central region; Dynamin; Dynamin GTPase
effector chr04_pseudomolecule_IMGAG_V2 26323903-26333190
E EGN_Mt071002 20080227
Length = 767
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/270 (69%), Positives = 212/270 (78%), Gaps = 5/270 (1%)
Query: 9 IISSIGALEMDYINTSHPNFIGGSRALEFAVQQTKSSRAALSVSRQKDGLESDKGSASER 68
+I+ I +EMDYINTSHPNFIGGS+ALE AVQQTKSS +VS+ KD +ESDKGSASER
Sbjct: 485 MITHIIEMEMDYINTSHPNFIGGSKALEAAVQQTKSS----TVSKVKDAVESDKGSASER 540
Query: 69 SVKSRAILARQSNGVAGDQGVRAVSEIEKIAPXXXXXXXXXXXXXXXXXXXXRMSVKENI 128
S KSR+ILAR +NG D GVRA S+I+K+ R+SVKEN
Sbjct: 541 SGKSRSILARHANGGMADHGVRASSDIDKVLHSGTTSGSSWGISSIFGGGDNRVSVKENT 600
Query: 129 ASKPHTEPVHSVEQSFSMIHLREPPTILRPSESNSETEAIEITVTKLLLKSYYDIVRKNV 188
SK H +PV SV S S IHLREPPT+LRPSE +SET A+EI VTKLLL+SYY+IVRKNV
Sbjct: 601 NSKHHNDPVQSVLPS-STIHLREPPTVLRPSERSSETLAVEIAVTKLLLRSYYEIVRKNV 659
Query: 189 EDFIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPEEIAMKRKRCRELLRAYQQ 248
ED IPKAIMHFLVNNTKRELHNVFI LYRD+LFEEMLQEP EIA+KRKRCRELLRAYQQ
Sbjct: 660 EDLIPKAIMHFLVNNTKRELHNVFIANLYRDDLFEEMLQEPNEIAVKRKRCRELLRAYQQ 719
Query: 249 AFKDLEELPMEAETVERGYSLPETTGLPKI 278
AF+DL+ELP+EAET E G+S PETTGLPKI
Sbjct: 720 AFRDLDELPLEAETAEWGHSSPETTGLPKI 749
>IMGA|AC174339_26.4 Dynamin central region; Dynamin; Dynamin GTPase
effector chr04_pseudomolecule_IMGAG_V2 26236127-26245415
E EGN_Mt071002 20080227
Length = 760
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/270 (69%), Positives = 212/270 (78%), Gaps = 5/270 (1%)
Query: 9 IISSIGALEMDYINTSHPNFIGGSRALEFAVQQTKSSRAALSVSRQKDGLESDKGSASER 68
+I+ I +EMDYINTSHPNFIGGS+ALE AVQQTKSS +VS+ KD +ESDKGSASER
Sbjct: 485 MITHIIEMEMDYINTSHPNFIGGSKALEAAVQQTKSS----TVSKVKDAVESDKGSASER 540
Query: 69 SVKSRAILARQSNGVAGDQGVRAVSEIEKIAPXXXXXXXXXXXXXXXXXXXXRMSVKENI 128
S KSR+ILAR +NG D GVRA S+I+K+ R+SVKEN
Sbjct: 541 SGKSRSILARHANGGMADHGVRASSDIDKVLHSGTTSGSSWGISSIFGGGDNRVSVKENT 600
Query: 129 ASKPHTEPVHSVEQSFSMIHLREPPTILRPSESNSETEAIEITVTKLLLKSYYDIVRKNV 188
SK H +PV SV S S IHLREPPT+LRPSE +SET A+EI VTKLLL+SYY+IVRKNV
Sbjct: 601 NSKHHNDPVQSVLPS-STIHLREPPTVLRPSERSSETLAVEIAVTKLLLRSYYEIVRKNV 659
Query: 189 EDFIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPEEIAMKRKRCRELLRAYQQ 248
ED IPKAIMHFLVNNTKRELHNVFI LYRD+LFEEMLQEP EIA+KRKRCRELLRAYQQ
Sbjct: 660 EDLIPKAIMHFLVNNTKRELHNVFIANLYRDDLFEEMLQEPNEIAVKRKRCRELLRAYQQ 719
Query: 249 AFKDLEELPMEAETVERGYSLPETTGLPKI 278
AF+DL+ELP+EAET E G+S PETTGLPKI
Sbjct: 720 AFRDLDELPLEAETAEWGHSSPETTGLPKI 749