Miyakogusa Predicted Gene

chr5.LjT39E05.30.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.LjT39E05.30.nd + phase: 0 
         (323 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC170856_13.4 Longin-like chr02_pseudomolecule_IMGAG_V2 221...   447   e-126

>IMGA|AC170856_13.4 Longin-like chr02_pseudomolecule_IMGAG_V2
           22185645-22190884 F EGN_Mt071002 20080227
          Length = 531

 Score =  447 bits (1149), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/273 (82%), Positives = 242/273 (88%), Gaps = 1/273 (0%)

Query: 31  LAASIVSKSGKVLVSRHFVDMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQPIEA 90
           LAASIV KSGKVLVSR FVDM+RIRIEGLLAAFPKL+GTGKQHTY+ET+NVRYVY PIE+
Sbjct: 4   LAASIVGKSGKVLVSRQFVDMSRIRIEGLLAAFPKLIGTGKQHTYIETDNVRYVYHPIES 63

Query: 91  LYLLLVTNKQSNILEDLDTLRLLSKLVPEYSYSLDEEGICKHAFELIFAFDEVISLGHKE 150
           LYLLLVTNKQSNILEDLDTLRLLSKLVPEYSYSLDEEGICKHAFELIFAFDEVI+LGHKE
Sbjct: 64  LYLLLVTNKQSNILEDLDTLRLLSKLVPEYSYSLDEEGICKHAFELIFAFDEVIALGHKE 123

Query: 151 SVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMKRKASEIDKSKIEKNRGDKVGFGP 210
           +VTVAQVKQYCEMESHEEKL+KLV QSK+NETKD+MKRKASEIDKSKIEKNRG+K GFGP
Sbjct: 124 NVTVAQVKQYCEMESHEEKLYKLVQQSKVNETKDLMKRKASEIDKSKIEKNRGEKGGFGP 183

Query: 211 LQSMGSGRIENSFSDXXXXXXXXX-XXXXXXXXXXPDLDSFSTKSKARPTSSATAPPKGL 269
           L SMGSGRIENSFSD                     D+DSFSTK K RPT+SA APPKGL
Sbjct: 184 LTSMGSGRIENSFSDMSISSSGTGFGSVSGFGLTTTDIDSFSTKPKGRPTASANAPPKGL 243

Query: 270 GMKLGKSQRTNQFLESLKAEGEVIVEDVQPRLG 302
           GMKLGKSQ+TNQFLESLKAEGEVI+E VQP+LG
Sbjct: 244 GMKLGKSQKTNQFLESLKAEGEVILEVVQPKLG 276