Miyakogusa Predicted Gene
- chr5.CM0909.350.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr5.CM0909.350.nc + phase: 0
(147 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC166707_17.4 Oleosin chr01_pseudomolecule_IMGAG_V2 2298070... 179 4e-46
IMGA|CR940307_16.5 Oleosin chr03_pseudomolecule_IMGAG_V2 3093489... 98 2e-21
IMGA|AC174342_6.5 Oleosin chr06_pseudomolecule_IMGAG_V2 308113-3... 47 3e-06
IMGA|AC126785_8.4 Oleosin; Casein, alpha/beta chr05_pseudomolecu... 42 8e-05
>IMGA|AC166707_17.4 Oleosin chr01_pseudomolecule_IMGAG_V2
22980700-22981400 F EGN_Mt071002 20080227
Length = 149
Score = 179 bits (454), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/145 (66%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
Query: 1 MSDT--HYQPLRXXXXXXXXXXXXX-XXXXXXFIKAATAVTAGGSLLILAGLMLAGTVIA 57
M+DT HYQPLR +K++TAVTAGGSLLIL+GL+LAGTVIA
Sbjct: 1 MADTGGHYQPLRGYNQQHSTTTQQQPSSKLTQLLKSSTAVTAGGSLLILSGLVLAGTVIA 60
Query: 58 LTIATPLFVIFSPVLVPAVIAVSXXXXXXXXXXXXXXXXITVLAWIYRYVTGKHPPGADQ 117
LTIATPLF++FSPVLVPAVI V+ ITVLAWIYRYVTGKHPPGADQ
Sbjct: 61 LTIATPLFLLFSPVLVPAVITVALLTLGFFVSGGFGVAAITVLAWIYRYVTGKHPPGADQ 120
Query: 118 LDTARHKLMNKAREIKDYGQQQISG 142
LDTARHKLMNKAREIKDYGQQQISG
Sbjct: 121 LDTARHKLMNKAREIKDYGQQQISG 145
>IMGA|CR940307_16.5 Oleosin chr03_pseudomolecule_IMGAG_V2
30934891-30935786 F EGN_Mt071002 20080227
Length = 161
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 31 IKAATAVTAGGSLLILAGLMLAGTVIALTIATPLFVIFSPVLVPAVIAVSXXXXXXXXXX 90
+K TA T G +LL L+GL+L GTVI L IATPL VIFSP+LVPA I +S
Sbjct: 37 VKFITAATIGVTLLFLSGLILVGTVIGLIIATPLLVIFSPILVPAAIVLSLIAGGFMFSG 96
Query: 91 XXXXXXITVLAWIYRYVTGKHPPGADQLDTARHKLMNKAREI----KDYGQ 137
I L+WIY YV+G P G D LD A+ + +KAR++ KDYG
Sbjct: 97 GCGVAAIAALSWIYNYVSGNRPAGTDTLDYAKGLITDKARDVKERAKDYGN 147
>IMGA|AC174342_6.5 Oleosin chr06_pseudomolecule_IMGAG_V2
308113-307242 F EGN_Mt071002 20080227
Length = 193
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 54 TVIALTIATPLFVIFSPVLVPAVIAVSXXXXXXXXXXXXXXXXITVLAWIYRYVTGKHP- 112
++I L I TPLF++FSPVL+PA + + + L+W RY+ H
Sbjct: 87 SLIGLAIMTPLFILFSPVLIPAALTIGLAVAGILTADACGLTGLMSLSWTARYIRDLHAA 146
Query: 113 -PG--------ADQLDTARHKLMNKAREIKDYGQ 137
PG AD +D K + ++ K+ GQ
Sbjct: 147 VPGQMDVKGRMADVVDYVGQKTKDVGQKTKEVGQ 180
>IMGA|AC126785_8.4 Oleosin; Casein, alpha/beta
chr05_pseudomolecule_IMGAG_V2 14141192-14140010 E
EGN_Mt071002 20080227
Length = 286
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 54 TVIALTIATPLFVIFSPVLVPAVIAVSXXXXXXXXXXXXXXXXITVLAWIYRYVTGKHPP 113
T+ + + TPLFV+FSPVL+PA I +++ +W+ Y+ +H
Sbjct: 61 TLTGVVVTTPLFVLFSPVLIPATIVTGLTVVSFFTSAIFGLTALSLFSWVMNYI--RHAQ 118
Query: 114 GADQLDTARHKLMNKAREIK 133
G Q H + K R ++
Sbjct: 119 GTLQ----EHLELEKQRMVE 134