Miyakogusa Predicted Gene
- chr5.CM0345.1450.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr5.CM0345.1450.nc - phase: 1 /partial
(617 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC144617_22.5 Endonuclease/exonuclease/phosphatase chr01_ps... 679 0.0
IMGA|AC145449_37.4 Endonuclease/exonuclease/phosphatase chr04_ps... 136 2e-32
IMGA|AC119415_51.5 Calcium-binding EF-hand; Endonuclease/exonucl... 51 2e-06
>IMGA|AC144617_22.5 Endonuclease/exonuclease/phosphatase
chr01_pseudomolecule_IMGAG_V2 3434673-3444796 E
EGN_Mt071002 20080227
Length = 864
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/656 (57%), Positives = 445/656 (67%), Gaps = 83/656 (12%)
Query: 1 MRTGNPVDGCAIFWRTS---------------------------RFNLLYEECIEFNKLG 33
MRTGNPVDGCAIFWRTS +FNL+YEECIEFNKLG
Sbjct: 251 MRTGNPVDGCAIFWRTSSIWTLYHLLELLQVSQLNHMSYALRIIQFNLVYEECIEFNKLG 310
Query: 34 LRDNVAQICVLELINQNGSLPPSLKGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKA 93
LRDNVAQICVLE INQNGSLPPSL GS KVVVCNIHVLYNPNRGEIKLGQVRVLLDKA+A
Sbjct: 311 LRDNVAQICVLECINQNGSLPPSLTGSRKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAQA 370
Query: 94 VSELWNNAPIVICGDFNCTPKSPLYNFISEQKLDLSGIDRDKVSGQASATIRPPRRVGTN 153
VS+LWNNAP+++CGDFNCTPKSPLYNFI+EQKLDLSGIDR+KVSGQASA IR P G
Sbjct: 371 VSQLWNNAPVILCGDFNCTPKSPLYNFIAEQKLDLSGIDRNKVSGQASAVIRAPWTYGPK 430
Query: 154 NSE-RPADGSVQVPSTEGDKEVKIGQDSSVSGMQNPETKNNSSENQHTHTVLDVSKSSTD 212
+SE R A+ SVQ S EGDKEV + Q+SS S QNP T+++S + Q+T V+ +S TD
Sbjct: 431 SSERRSANVSVQAISAEGDKEVTVEQNSSSSDKQNPVTESSSLDKQNTRPVMIMS-DKTD 489
Query: 213 MQCAKETDQYVDKDTQDIAVDH-KIFNGVDHGKEESNTYHSESRLLIHHIDGEIHNTTPM 271
+QC++ETD KDT++ AVDH KIF VD KE N +++ I+ D EIH+ TP+
Sbjct: 490 VQCSRETDTCAGKDTRE-AVDHNKIFVEVDGTKEGPNPSYNKG---IN--DDEIHDVTPI 543
Query: 272 TSSALETVHTDAAGLGSTRHKHISDAIXXXXXXXXXXXXXXHDPKGNEHTQE-------- 323
TSS LETV TD G+GST + ISDAI HD KG H +
Sbjct: 544 TSSTLETVRTDPPGMGST--ERISDAISATDQESLSEKSNLHDHKGTTHMESNCSPTSLQ 601
Query: 324 --EQSSRVNIDLESTDVVNLKXXXXXXXXXXXXXDAFVVPNPGYSESPSCEVVADDQMDS 381
+Q+S+V ID+ESTD++NL+ D F P+PGY ES S E +A+DQM+
Sbjct: 602 EGDQASKVKIDIESTDLINLEASSNKPSSNTSVSDDFEAPHPGYRESSSYEAIANDQMNL 661
Query: 382 SSISCLVYKSHQSTNIDFPLDEKLGETFLDEIDKTIIGSENVSEDDNVLKTEFHNAKEGV 441
SS +V KSH+ TNIDF L+EKL + DEID+ + S N+ ED H+A+E
Sbjct: 662 SSTEYVVDKSHKITNIDFLLNEKLEKFSFDEIDQADVNSGNIGEDAVDFINALHSARE-- 719
Query: 442 ALDLGPSVKSDFVKSYQVXXXXXXXXXXXXPAESNEVEDELSPVPISKSIDPGKTTHNPS 501
ESN+ ED+LSP P+SK ID +TT+NPS
Sbjct: 720 --------------------------------ESNDTEDDLSPSPMSKYIDAERTTYNPS 747
Query: 502 LWTPMEIKTAAGNAECTVLEHPLLLRSTYTEATMNCSGTRDPHGEPLVTSYHRCFSGTVD 561
LWTP EI+TA GNAECT L HPL LRSTYTEA M+ SGTRDP+GEPLVTSY++CF GTVD
Sbjct: 748 LWTPAEIETATGNAECTFLGHPLSLRSTYTEA-MDSSGTRDPNGEPLVTSYNKCFLGTVD 806
Query: 562 YIWRSEGLQTTRVLAPIPKHVMEWTPGFPTKKWGSDHIALVSELAFLKEGSDISKD 617
YIWRSEGLQTTRVLAPIPK VME T G+PTKKWGSDHIALVSELAF+++G+ ISKD
Sbjct: 807 YIWRSEGLQTTRVLAPIPKRVMESTQGYPTKKWGSDHIALVSELAFMEDGTAISKD 862
>IMGA|AC145449_37.4 Endonuclease/exonuclease/phosphatase
chr04_pseudomolecule_IMGAG_V2 37302544-37297750 H
EGN_Mt071002 20080227
Length = 403
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 95/150 (63%), Gaps = 22/150 (14%)
Query: 2 RTGNPVDGCAIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLELINQNGSLPPSLKGSS 61
RTG+ DGCA+FW+ +F LL E I++ +GLRDNVAQ+ V E+ + S
Sbjct: 132 RTGDTSDGCAMFWKADKFRLLDGESIQYKNIGLRDNVAQLLVFEMSGSD---------SR 182
Query: 62 KVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSELWNNAPIVICGDFNCTPKSPLYNFI 121
+++V NIHVLYNPNRGE+KLGQ+R L KA+++SE W NAP+++ GDFN TP
Sbjct: 183 RLLVGNIHVLYNPNRGEVKLGQIRFLSSKAQSLSEKWGNAPVILAGDFNSTP-------- 234
Query: 122 SEQKLDLSGIDRDKVSGQASATIRPPRRVG 151
+L++ DR ++SGQ RP + +G
Sbjct: 235 ---ELNIKLYDRKQLSGQKRC--RPAQVLG 259
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 502 LWTPMEIKTAAGNAECTVLEHPLLLRSTYTEATMNCSG-TRDPHGEPLVTSYHRCFSGTV 560
WT E+KTA G++EC + HPL L S+Y AT+N S TR +GEPL TSYH F GTV
Sbjct: 277 FWTDEEVKTATGDSECHLAVHPLKLNSSY--ATVNGSASTRGLNGEPLATSYHSKFLGTV 334
Query: 561 DYIWRSEGLQTTRVLAPIPKHVMEWTPGFPTKKWGSDHIALVSELAF 607
DY+W SEG+ TRVL + + G P KK GSDH+AL+SE +F
Sbjct: 335 DYLWYSEGIVPTRVLDTVSISDLLREGGLPCKKVGSDHLALLSEFSF 381
>IMGA|AC119415_51.5 Calcium-binding EF-hand;
Endonuclease/exonuclease/phosphatase
chr03_pseudomolecule_IMGAG_V2 33559595-33562887 E
EGN_Mt071002 20080227
Length = 477
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 2 RTGNPVDGCAIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLELIN-----QNGSLPPS 56
RT N DG I +T FN+ + + FN +G D VAQ+ +EL+ +NG +
Sbjct: 142 RTNNRGDGLLIAVQTEYFNIFNYKELHFNDIG--DRVAQLLHVELVFPFSKWRNGEI--- 196
Query: 57 LKGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSELWNN-----APIVICGDFNC 111
++++ N H+L+ P+ + L +++ + + V N+ PI++CGD+N
Sbjct: 197 ---RQEILIVNTHLLF-PHDATLSLVRLKQVYKILQYVESYQNDFQLKPMPIMLCGDWNG 252
Query: 112 TPKSPLYNFISEQ 124
+ + +Y F+ Q
Sbjct: 253 SKRGHVYKFLRSQ 265