Miyakogusa Predicted Gene

chr5.CM0200.1570.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0200.1570.nc - phase: 0 
         (617 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|CT573077_20.4 Tyrosine specific protein phosphatase and dua...   699   0.0  
IMGA|AC199763_39.4 Tyrosine specific protein phosphatase and dua...   163   2e-40
IMGA|AC128660_50.5 C2 calcium/lipid-binding region, CaLB chr01_p...    56   4e-08
IMGA|AC159537_27.4 Quinonprotein alcohol dehydrogenase-like chr0...    53   3e-07

>IMGA|CT573077_20.4 Tyrosine specific protein phosphatase and dual
           specificity protein phosphatase; C2
           calcium/lipid-binding region, CaLB
           chr05_pseudomolecule_IMGAG_V2 5820477-5815487 E
           EGN_Mt071002 20080227
          Length = 592

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/604 (59%), Positives = 427/604 (70%), Gaps = 26/604 (4%)

Query: 20  SPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKIXXXXXXXXXXXXXANA 79
           +PP+ +T  E  ++    E+++A ++PS    + ISSWA+NL+               N 
Sbjct: 4   APPSSKT--EPYSAKVPAENDNARDSPSLSPVSSISSWARNLRFGAADQNSQTE----NN 57

Query: 80  GKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNLLGNITKGLVDSSKNAVKAVQVKAR 139
           G S+FAR TS +GLR  P   AT     E   Q N++ + TKGLVDSSK AVKAVQ KAR
Sbjct: 58  GMSAFARLTSGIGLRSPPNELATSSSGAE---QPNIIESFTKGLVDSSKEAVKAVQTKAR 114

Query: 140 HVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSXXXXXXXXXXRNHMEEVIKFFE 199
           H+VSQNKRRYQEGGFDLDMTYITENIIAMGFP GD SS          RNHMEEVIKFFE
Sbjct: 115 HIVSQNKRRYQEGGFDLDMTYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIKFFE 174

Query: 200 TQHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKEDIEN 259
           T HKGKYKVYNLCSERLYD SLF+GKVASFPF DHNCPPIQLI SFC+SAYSWLKEDI+N
Sbjct: 175 THHKGKYKVYNLCSERLYDGSLFQGKVASFPFSDHNCPPIQLIASFCRSAYSWLKEDIQN 234

Query: 260 VVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYF 319
           VVVVHCKAGM RTGLMI SLLL+LKFFPTAEE++D +NQKRCVDGK L LPSQIRYVKYF
Sbjct: 235 VVVVHCKAGMGRTGLMICSLLLYLKFFPTAEEAIDSFNQKRCVDGKALTLPSQIRYVKYF 294

Query: 320 ERVMTYFNGENPPPRRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLAED 379
           ER +T+FNGE  P RRCMLRGFRLH+CPYW+RPSIT+SDH+G+LF+T+KHP+TKDL+ ED
Sbjct: 295 ERTLTHFNGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHNGILFTTRKHPKTKDLMPED 354

Query: 380 FWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLD 439
           FW +A KKG++VFALPGEPGLTEL GDFKIHFHDRQGDFYCW+NTTM ENRKIL+ SDLD
Sbjct: 355 FWINASKKGILVFALPGEPGLTELVGDFKIHFHDRQGDFYCWMNTTMIENRKILDGSDLD 414

Query: 440 GFDKRKLPSPGFMVEVVLVDYNGNVVTSRPETVTKKSDXXXXXXXXXXXXXXXXXXXXKE 499
            FDKRK+P+PGF VEVV+VDY+G  +  +    +K SD                    K 
Sbjct: 415 DFDKRKIPAPGFQVEVVMVDYDG-TLPGKVNPASKGSDIRNVSSGAKPTSSSRKSKIPKN 473

Query: 500 SEGAEKDDVFSDGEAEHPASSRSKQTKASEAVETVTNAPRESESNKNSDQVSNLTRATEQ 559
            +    DDVFSD + E      +K T+  EA            S   +D V  L+RAT+Q
Sbjct: 474 GD----DDVFSDSDEE-----ETKGTQRREAATDYKYMEPHQASEATTDHVGMLSRATDQ 524

Query: 560 VSLGNKISTPIHSAGEPK-SDDGRTVPSLPTPSS-----ESEFKAMAADASVFTFGDDED 613
           +SL        ++  E   ++    + + P  ++      SEFKA+AADASVF+FG DED
Sbjct: 525 LSLQQHDERTENNVSEASTTNKHHNIHAGPNTTNMESIGTSEFKAIAADASVFSFG-DED 583

Query: 614 YESD 617
           +ESD
Sbjct: 584 FESD 587


>IMGA|AC199763_39.4 Tyrosine specific protein phosphatase and dual
           specificity protein phosphatase; C2
           calcium/lipid-binding region, CaLB
           chr07_pseudomolecule_IMGAG_V2 4358764-4361636 H
           EGN_Mt071002 20080227
          Length = 420

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 183/376 (48%), Gaps = 71/376 (18%)

Query: 139 RHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSXXXXXXXXXXRNHMEEVIKFF 198
           R++VS+ +RR    G+DLDM+YIT+ ++AM FPA  M +          RN + +V    
Sbjct: 36  RNLVSKQRRRILIAGYDLDMSYITDRVLAMSFPAERMRAMY--------RNPLWQVKSVL 87

Query: 199 ETQHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKEDIE 258
           + +H   YKVYNLC E  YD + F G+V  +PFDD++ P +++I  FC+S  SWL  D +
Sbjct: 88  DMRHLEHYKVYNLCIEEHYDPAQFYGRVEEYPFDDNHVPSLEMIKDFCESVNSWLTRDPK 147

Query: 259 NVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKY 318
           N+VV+HC AG  RTGLM+SS L +     +A+E++  Y  +R  + +G+ +PSQ RYV Y
Sbjct: 148 NIVVIHCMAGKGRTGLMVSSYLTYCGM--SADEALQLYADRRTTNNEGVSIPSQRRYVGY 205

Query: 319 FERVMTYFNGE--NPP----PRRCM--LRGFRLH----------------RCPYWI-RPS 353
           +E +++   G    PP    P+ C   LR  RL+                  P  + RPS
Sbjct: 206 WESLLSVPRGAGYGPPKVTLPQPCSRELRRVRLYDTVNIDTVFFVISELQEIPNEVYRPS 265

Query: 354 ITVSDHSGVLFSTKKHPRTKDLLAEDFWFSAPKKG-------------VMVFALPGEPGL 400
           + V   S      K + RT    +  ++ S   +G             V+V      P +
Sbjct: 266 VEVC-RSCCREVKKGYQRTN---SPRYYISTIPQGDEDGEQSEIEEPRVVVQMDTESPAI 321

Query: 401 -------------TELAGDFKIHFHDRQGD---FYCWLNTTMTENRKI-LNTSDLDGFDK 443
                         ++ GD ++ F+++      FYC  NT    N  + L  ++LD   K
Sbjct: 322 YQKSCLDHYFDKPIQVTGDVRVIFYEKMIGGRLFYCCFNTAFIRNSLLQLTVNELDKVGK 381

Query: 444 --RKLPSPGFMVEVVL 457
             R +  P F +E++ 
Sbjct: 382 KGRSICGPTFCLELLF 397


>IMGA|AC128660_50.5 C2 calcium/lipid-binding region, CaLB
           chr01_pseudomolecule_IMGAG_V2 4488893-4493515 H
           EGN_Mt071002 20080227
          Length = 783

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 25/173 (14%)

Query: 222 FEGKVASFPFDDHNCP--PIQLIISFCQSAYSWLKEDIENVVVVHC-KAGMARTGLMISS 278
           ++  V  +P     CP   +++I  F +S  +WL+   +N+V++HC + G      M+++
Sbjct: 81  YDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGNQNIVLMHCERGGWPVLAFMLAA 140

Query: 279 LLLFLKFFPTAEESMDYYNQKRCVDGKGLV-----LPSQIRYVKYFERVMTYFNGENPPP 333
           LL++ K +   ++++D   ++   +   L+     LPSQ+RY++Y  R       E PP 
Sbjct: 141 LLIYRKMYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISR--RNVGSEWPPL 198

Query: 334 RRCM-LRGFRLHRCP--------------YWIRPSITVSDHSGVLFSTKKHPR 371
            R + L    + + P              Y   P I  +    VLFST K  +
Sbjct: 199 DRALTLDCVIIRQIPNMDGEGGCRPIFRIYGQDPFIPANRSPKVLFSTPKRSK 251


>IMGA|AC159537_27.4 Quinonprotein alcohol dehydrogenase-like
           chr08_pseudomolecule_IMGAG_V2 33841561-33847620 E
           EGN_Mt071002 20080227
          Length = 888

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 15/136 (11%)

Query: 194 VIKFFETQHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCP--PIQLIISFCQSAYS 251
           ++ F   + + K  + N+ SE  YD ++ +     +P     CP   ++LI  F +S+ S
Sbjct: 60  ILVFNFREEETKSLMANIISE--YDITIMD-----YPRHYEGCPVLKMELIHHFLRSSES 112

Query: 252 WLKEDIENVVVVHC-KAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLV-- 308
           WL     NV+++HC + G      M+++LL++ K +     ++D   ++       L+  
Sbjct: 113 WLSLGQHNVLLMHCERGGWPVMAFMLAALLIYRKVYSGEHRTLDMIYRQSPHQLLHLLTP 172

Query: 309 ---LPSQIRYVKYFER 321
              +PSQ+RY++Y  R
Sbjct: 173 LNPIPSQLRYLQYVSR 188