Miyakogusa Predicted Gene

chr5.CM0148.500.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0148.500.nd - phase: 0 
         (155 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC157779_21.5 Cytochrome b5 chr06_pseudomolecule_IMGAG_V2 9...   157   2e-39
IMGA|AC174348_49.4 Cytochrome b5 chr06_pseudomolecule_IMGAG_V2 5...    83   6e-17
IMGA|CU013524_13.4 Cytochrome b5 chr03_pseudomolecule_IMGAG_V2 1...    80   3e-16
IMGA|AC174348_19.4 Membrane steroid-binding protein 1  chr06_pse...    71   2e-13

>IMGA|AC157779_21.5 Cytochrome b5 chr06_pseudomolecule_IMGAG_V2
           9786281-9781120 F EGN_Mt071002 20080227
          Length = 235

 Score =  157 bits (396), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/128 (65%), Positives = 89/128 (69%), Gaps = 14/128 (10%)

Query: 41  SRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKYV 100
           SRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKF  KYV
Sbjct: 104 SRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMGKYV 163

Query: 101 KVGTVKSNVXXXXXXXXXXXXXXXXRDVD-------------AAKPAENGPSETAAVKSD 147
           KVGT+K+ V                R VD             A+KP EN PSETA VKSD
Sbjct: 164 KVGTIKT-VPVTKPESTGEPSESTSRGVDASSIPHENHDAAEASKPHENTPSETAPVKSD 222

Query: 148 ENVDVNKD 155
           EN  ++ D
Sbjct: 223 ENTPLSVD 230


>IMGA|AC174348_49.4 Cytochrome b5 chr06_pseudomolecule_IMGAG_V2
           5388553-5385660 H EGN_Mt071002 20080227
          Length = 195

 Score = 82.8 bits (203), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 49/64 (76%)

Query: 42  RMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKYVK 101
           + FYGPGG YA+FAGK+ SRALA +SF+ +D+ G++ GL   EL  L+DWEYKF +KY K
Sbjct: 110 KNFYGPGGSYAMFAGKECSRALALLSFKPQDINGNLEGLDESELAILEDWEYKFIDKYPK 169

Query: 102 VGTV 105
           VG +
Sbjct: 170 VGQL 173


>IMGA|CU013524_13.4 Cytochrome b5 chr03_pseudomolecule_IMGAG_V2
           19847484-19848265 F EGN_Mt071002 20080227
          Length = 100

 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 47/68 (69%)

Query: 40  SSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKY 99
           + + FYGPGG YA+FAGKDASRALAKMS  E+D+T  + GL   E+  L DWE KF  KY
Sbjct: 33  TGKSFYGPGGAYAMFAGKDASRALAKMSKNEEDITSSLDGLTEKEIGVLNDWETKFVAKY 92

Query: 100 VKVGTVKS 107
             V T+ S
Sbjct: 93  PVVATIVS 100


>IMGA|AC174348_19.4 Membrane steroid-binding protein 1
           chr06_pseudomolecule_IMGAG_V2 5355951-5356281 H
           EGN_Mt071002 20080227
          Length = 86

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 43/60 (71%)

Query: 44  FYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKYVKVG 103
           FYG GG YA+FAGK+ +  LA +SF+ +D+ G++ G    EL  L+DWEYKF +KY KVG
Sbjct: 27  FYGSGGLYAMFAGKECNLPLALLSFKPQDINGNLEGFHKSELTVLEDWEYKFIDKYSKVG 86