Miyakogusa Predicted Gene
- chr4.LjT06B21.60.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.LjT06B21.60.nd + phase: 0
(601 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC141112_46.4 Heat shock protein DnaJ, N-terminal chr03_pse... 300 1e-81
IMGA|AC171535_31.5 Heat shock protein DnaJ, N-terminal chr04_pse... 298 5e-81
IMGA|AC171535_20.5 Heat shock protein DnaJ, N-terminal chr04_ps... 194 7e-50
IMGA|AC169183_19.5 Heat shock protein DnaJ, N-terminal chr02_pse... 124 8e-29
>IMGA|AC141112_46.4 Heat shock protein DnaJ, N-terminal
chr03_pseudomolecule_IMGAG_V2 35462454-35468822 E
EGN_Mt071002 20080227
Length = 735
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/230 (65%), Positives = 169/230 (73%), Gaps = 2/230 (0%)
Query: 373 MNQQKNDNDLESFFXXXXXXXXXXXX-XTNSTESAFEPQFQADVTRXXXXXXXXXXXXXX 431
M QQKN+NDLESFF +NS++S F+ +FQ+DV +
Sbjct: 507 MYQQKNENDLESFFSVRGRANSAPRPPRSNSSDSVFDVKFQSDVNQKPTTVSSNIKRAPS 566
Query: 432 XXNIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQ 491
NIVDDLSSIFGA+P S+GEFQ+VEG LAEKNQRDL+
Sbjct: 567 SPNIVDDLSSIFGASP-SAGEFQEVEGESEERRKARLERLQRAQERAAKALAEKNQRDLR 625
Query: 492 TQRDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAS 551
TQR+Q ER+R+ ETLDFE+KRW+AGKEGNLRALLSTLQYVLWPECGWQ VSLTDLITAA+
Sbjct: 626 TQREQDERHRLAETLDFEVKRWAAGKEGNLRALLSTLQYVLWPECGWQAVSLTDLITAAT 685
Query: 552 VKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSEELF 601
VKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKE+WNKFNSEELF
Sbjct: 686 VKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKEAWNKFNSEELF 735
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 1 MPTFSSNSNKPV-GQRSTSPPPYDNVGFRQANIQVDMSPKYEENLES-SEDIWLTVSEIP 58
MP +SS+SNKPV GQ TSP Y N GFR N + DMSPKYEENL S +DIWLTVSEIP
Sbjct: 266 MPKYSSDSNKPVVGQMPTSPS-YVNDGFRPINSRADMSPKYEENLASDHDDIWLTVSEIP 324
Query: 59 LFTQXXXXXXXXXXXXXXXVHIPKS 83
LFTQ VHIPKS
Sbjct: 325 LFTQPTSAPPPSRPPPPRPVHIPKS 349
>IMGA|AC171535_31.5 Heat shock protein DnaJ, N-terminal
chr04_pseudomolecule_IMGAG_V2 33815856-33810209 H
EGN_Mt071002 20080227
Length = 410
Score = 298 bits (762), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/230 (67%), Positives = 164/230 (71%), Gaps = 12/230 (5%)
Query: 373 MNQQKNDNDLESFFXXXXXXXXXXXXXTN-STESAFEPQFQADVTRXXXXXXXXXXXXXX 431
MNQQKN +DLESFF + STE AD TR
Sbjct: 192 MNQQKNGDDLESFFGAGSRPSSAPRPFRDYSTE--------ADATRKSGSSNMKKAPSSS 243
Query: 432 XXNIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQ 491
NIVDDL+SIFGAAP SSGEFQ+VEG LAEKNQRDLQ
Sbjct: 244 --NIVDDLTSIFGAAP-SSGEFQEVEGESEERRKARLERHQRSQERVAKALAEKNQRDLQ 300
Query: 492 TQRDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAS 551
TQR+QAER+R+GETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPV LTDLITAA+
Sbjct: 301 TQREQAERSRLGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVGLTDLITAAA 360
Query: 552 VKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSEELF 601
VKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKE+WNKFNSEELF
Sbjct: 361 VKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKEAWNKFNSEELF 410
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 175 FRYAKEVRERESTKAARSKETVELEKDERGM 205
FR+AKEVRERE TKAA+SKE + EKD+R +
Sbjct: 12 FRHAKEVREREHTKAAKSKEFGQSEKDDRAI 42
>IMGA|AC171535_20.5 Heat shock protein DnaJ, N-terminal
chr04_pseudomolecule_IMGAG_V2 33854837-33856440 E
EGN_Mt071002 20080227
Length = 349
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/158 (63%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 2 PTFSSNSNKPVGQRSTSPPPYDNVGFRQANIQVDMSPKYEENLESSEDIWLTVSEIPLFT 61
PTFSS+SNKPVGQRSTSPP +N GF QANI DMSPKYEENLES ED+WLTVSEIPLFT
Sbjct: 179 PTFSSDSNKPVGQRSTSPP-NNNSGFGQANIPADMSPKYEENLESCEDVWLTVSEIPLFT 237
Query: 62 QXXXXXXXXXXXXXXXVHIPKSGAGSSASTNARKQASEFSSFPSSTRFSQXXXXXXXXXX 121
Q V+IP+SG GS ASTN RK+A+EFSSFP STRFS
Sbjct: 238 QPTTAPPPSRPPPPRPVNIPRSGTGSPASTNTRKKANEFSSFPGSTRFSHDPRSATAAAS 297
Query: 122 XXXXXQFDELDDFAMGRSRGNDSESGNGLPDEEVEMNS 159
QFDELDDFA G S ND+ESGNGLPD+E+EMN+
Sbjct: 298 ASPTSQFDELDDFAAGSSHSNDAESGNGLPDDELEMNT 335
>IMGA|AC169183_19.5 Heat shock protein DnaJ, N-terminal
chr02_pseudomolecule_IMGAG_V2 13534118-13537718 F
EGN_Mt071002 20080227
Length = 461
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%)
Query: 504 ETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKAYRKATLCI 563
E LD +I+ WS+GKE ++R LLSTL +LW + GW V LI ++ VKKAY+KA LC+
Sbjct: 357 EKLDTDIRLWSSGKETDIRMLLSTLHRILWSQSGWSAVPYMSLIESSQVKKAYQKARLCL 416
Query: 564 HPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSEEL 600
HPDK+QQ+GATL QKYIAEK F +L+++W F SE++
Sbjct: 417 HPDKLQQRGATLLQKYIAEKAFSILQDAWTTFISEDV 453