Miyakogusa Predicted Gene
- chr4.CM1334.150.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM1334.150.nc - phase: 0
(416 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC202500_12.4 RNA-binding region RNP-1 (RNA recognition mot... 551 e-157
IMGA|AC152402_23.4 RNA-binding region RNP-1 (RNA recognition mot... 551 e-157
IMGA|AC127168_20.5 RNA-binding region RNP-1 (RNA recognition mot... 367 e-102
IMGA|CU457783_12.3 RNA-binding region RNP-1 (RNA recognition mot... 350 8e-97
IMGA|AC146330_10.5 RNA-binding region RNP-1 (RNA recognition mot... 340 6e-94
IMGA|CT868696_6.4 RNA-binding region RNP-1 (RNA recognition moti... 124 1e-28
IMGA|AC144483_30.5 RNA-binding region RNP-1 (RNA recognition mot... 115 5e-26
IMGA|AC136449_16.5 RNA-binding region RNP-1 (RNA recognition mot... 97 1e-20
IMGA|AC174301_43.4 Polyadenylate binding protein, human types 1,... 93 2e-19
IMGA|AC148486_23.5 Ribosomal protein S2; Polyadenylate binding p... 91 1e-18
IMGA|AC122728_50.4 Polyadenylate binding protein, human types 1,... 87 1e-17
IMGA|AC202362_16.3 RNA-binding region RNP-1 (RNA recognition mot... 87 1e-17
IMGA|AC174312_11.5 RNA-binding region RNP-1 (RNA recognition mot... 80 2e-15
IMGA|AC150977_25.5 RNA-binding region RNP-1 (RNA recognition mot... 71 9e-13
IMGA|AC139882_12.5 RNA-binding region RNP-1 (RNA recognition mot... 70 2e-12
IMGA|AC139854_19.4 RNA-binding region RNP-1 (RNA recognition mot... 69 3e-12
IMGA|AC158464_2.5 RNA-binding region RNP-1 (RNA recognition moti... 67 1e-11
IMGA|AC157373_30.4 RNA-binding region RNP-1 (RNA recognition mot... 66 2e-11
IMGA|AC137522_14.4 RNA-binding region RNP-1 (RNA recognition mot... 65 4e-11
IMGA|CU041253_29.4 RNA-binding region RNP-1 (RNA recognition mot... 65 4e-11
IMGA|AC203559_11.4 RNA-binding region RNP-1 (RNA recognition mot... 65 5e-11
IMGA|AC202369_17.3 RNA-binding region RNP-1 (RNA recognition mot... 65 5e-11
IMGA|AC144431_42.4 RNA-binding region RNP-1 (RNA recognition mot... 60 1e-09
IMGA|AC148526_13.4 RNA-binding region RNP-1 (RNA recognition mot... 57 2e-08
IMGA|AC121232_18.4 RNA-binding region RNP-1 (RNA recognition mot... 56 3e-08
IMGA|AC146743_25.4 U2 auxiliary factor small subunit chr00_pseud... 56 4e-08
IMGA|AC135100_25.5 WW/Rsp5/WWP; Paraneoplastic encephalomyelitis... 55 4e-08
IMGA|AC174143_20.4 WW/Rsp5/WWP; Paraneoplastic encephalomyelitis... 55 4e-08
IMGA|AC126794_33.5 RNA-binding region RNP-1 (RNA recognition mot... 55 5e-08
IMGA|CT030180_20.5 RNA-binding region RNP-1 (RNA recognition mot... 55 8e-08
IMGA|AC145470_21.4 SWAP/Surp; RNA-binding region RNP-1 (RNA reco... 55 8e-08
IMGA|CR955006_36.5 RNA-binding region RNP-1 (RNA recognition mot... 54 1e-07
IMGA|AC141435_12.5 RNA-binding region RNP-1 (RNA recognition mot... 54 2e-07
IMGA|CT025837_35.4 RNA-binding region RNP-1 (RNA recognition mot... 53 2e-07
IMGA|AC119413_25.4 RNA-binding region RNP-1 (RNA recognition mot... 52 4e-07
IMGA|AC140027_27.5 RNA-binding region RNP-1 (RNA recognition mot... 52 5e-07
IMGA|AC122162_7.4 RNA-binding region RNP-1 (RNA recognition moti... 50 2e-06
IMGA|AC134242_14.5 RNA-binding region RNP-1 (RNA recognition mot... 50 2e-06
IMGA|AC146705_26.5 RNA-binding region RNP-1 (RNA recognition mot... 50 2e-06
IMGA|AC149546_31.4 RNA-binding region RNP-1 (RNA recognition mot... 49 3e-06
IMGA|AC202518_12.3 RNA-binding region RNP-1 (RNA recognition mot... 49 5e-06
IMGA|AC134242_17.5 RNA-binding region RNP-1 (RNA recognition mot... 47 1e-05
IMGA|CU024864_17.4 RNA-binding region RNP-1 (RNA recognition mot... 47 1e-05
IMGA|AC157981_22.5 RNA-binding region RNP-1 (RNA recognition mot... 46 2e-05
IMGA|AC134242_43.5 RNA-binding region RNP-1 (RNA recognition mot... 46 3e-05
IMGA|AC161788_24.4 RNA-binding region RNP-1 (RNA recognition mot... 45 4e-05
IMGA|AC124956_60.4 RNA-binding region RNP-1 (RNA recognition mot... 45 4e-05
IMGA|AC150443_41.5 RNA-binding region RNP-1 (RNA recognition mot... 45 5e-05
IMGA|AC149134_50.5 RNA-binding region RNP-1 (RNA recognition mot... 45 5e-05
IMGA|CU062643_11.3 RNA-binding region RNP-1 (RNA recognition mot... 45 6e-05
IMGA|AC146704_27.4 RNA-binding region RNP-1 (RNA recognition mot... 45 6e-05
IMGA|CT009540_36.5 RNA-binding region RNP-1 (RNA recognition mot... 44 2e-04
IMGA|AC160838_3.5 RNA-binding region RNP-1 (RNA recognition moti... 43 2e-04
IMGA|AC145289_29.5 RNA-binding region RNP-1 (RNA recognition mot... 43 3e-04
IMGA|AC131026_44.4 RNA-binding region RNP-1 (RNA recognition mot... 42 5e-04
IMGA|AC146760_9.5 RNA-binding region RNP-1 (RNA recognition moti... 41 7e-04
IMGA|AC150978_38.4 RNA-binding region RNP-1 (RNA recognition mot... 41 9e-04
IMGA|AC174277_12.4 RNA-binding region RNP-1 (RNA recognition mot... 41 0.001
>IMGA|AC202500_12.4 RNA-binding region RNP-1 (RNA recognition motif)
chr08_pseudomolecule_IMGAG_V2 34397955-34393689 F
EGN_Mt071002 20080227
Length = 411
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/334 (81%), Positives = 291/334 (87%), Gaps = 7/334 (2%)
Query: 69 DEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAER 128
DEV+TLWIGDLQYWMDENYLY CF+HTGE+ +VKVIRNK TNQSEGYGFLEF SRAGAER
Sbjct: 71 DEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAER 130
Query: 129 ILQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRT 188
+LQT+NGTIMPNGGQNFRLNWATFS+G E+RHDDSPDYTIFVGDLAADV+D+HLTEVFRT
Sbjct: 131 VLQTFNGTIMPNGGQNFRLNWATFSSG-EKRHDDSPDYTIFVGDLAADVSDHHLTEVFRT 189
Query: 189 RYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNL 248
RYNSVKGAKVVIDR T RTKGYGFVRFADESEQ+RAMTEMQGV+CSTRPMRIGPA+NKNL
Sbjct: 190 RYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNL 249
Query: 249 GTGTGTQPKASYQNSQG-PQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIP 307
GT T KASYQN QG QNENDPNNTTIFVGNLDPNVTD+HL+QVF YG+LVHVKIP
Sbjct: 250 GTQTS---KASYQNPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIP 306
Query: 308 QGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQTQSDPSQWNNSXXXX 367
GKRCGFVQFADRS AEEALRVLNGTLLGGQNVRLSWGRSP+NKQTQ DP+QWN S
Sbjct: 307 SGKRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGS-SSY 365
Query: 368 XXXXXXXXXXXXXXXPAGQDPNMYAGYP-GYANY 400
PAGQDPNMY YP GYA+Y
Sbjct: 366 FGGYAQGYENYAYAPPAGQDPNMYGSYPAGYASY 399
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 262 NSQGPQNENDPNNT------TIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRC--- 312
N+Q PQ P + T+++G+L + +++L F G++ VK+ + K+
Sbjct: 55 NAQPPQQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQS 114
Query: 313 ---GFVQFADRSCAEEALRVLNGTLL--GGQNVRLSWGRSPSNKQTQSD 356
GF++F R+ AE L+ NGT++ GGQN RL+W S ++ D
Sbjct: 115 EGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDD 163
>IMGA|AC152402_23.4 RNA-binding region RNP-1 (RNA recognition motif)
chr08_pseudomolecule_IMGAG_V2 34279564-34283829 F
EGN_Mt071002 20080227
Length = 411
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/334 (81%), Positives = 291/334 (87%), Gaps = 7/334 (2%)
Query: 69 DEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAER 128
DEV+TLWIGDLQYWMDENYLY CF+HTGE+ +VKVIRNK TNQSEGYGFLEF SRAGAER
Sbjct: 71 DEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAER 130
Query: 129 ILQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRT 188
+LQT+NGTIMPNGGQNFRLNWATFS+G E+RHDDSPDYTIFVGDLAADV+D+HLTEVFRT
Sbjct: 131 VLQTFNGTIMPNGGQNFRLNWATFSSG-EKRHDDSPDYTIFVGDLAADVSDHHLTEVFRT 189
Query: 189 RYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNL 248
RYNSVKGAKVVIDR T RTKGYGFVRFADESEQ+RAMTEMQGV+CSTRPMRIGPA+NKNL
Sbjct: 190 RYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNL 249
Query: 249 GTGTGTQPKASYQNSQG-PQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIP 307
GT T KASYQN QG QNENDPNNTTIFVGNLDPNVTD+HL+QVF YG+LVHVKIP
Sbjct: 250 GTQTS---KASYQNPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIP 306
Query: 308 QGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQTQSDPSQWNNSXXXX 367
GKRCGFVQFADRS AEEALRVLNGTLLGGQNVRLSWGRSP+NKQTQ DP+QWN S
Sbjct: 307 SGKRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGS-SSY 365
Query: 368 XXXXXXXXXXXXXXXPAGQDPNMYAGYP-GYANY 400
PAGQDPNMY YP GYA+Y
Sbjct: 366 FGGYAQGYENYAYAPPAGQDPNMYGSYPAGYASY 399
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 262 NSQGPQNENDPNNT------TIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRC--- 312
N+Q PQ P + T+++G+L + +++L F G++ VK+ + K+
Sbjct: 55 NAQPPQQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQS 114
Query: 313 ---GFVQFADRSCAEEALRVLNGTLL--GGQNVRLSWGRSPSNKQTQSD 356
GF++F R+ AE L+ NGT++ GGQN RL+W S ++ D
Sbjct: 115 EGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDD 163
>IMGA|AC127168_20.5 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 28623498-28619047 F
EGN_Mt071002 20080227
Length = 454
Score = 367 bits (941), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/308 (58%), Positives = 224/308 (72%), Gaps = 21/308 (6%)
Query: 67 TPDEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGA 126
P+E+RT+W+GDL +WMDE +L+ CFAHTGE+A+ KVIRNK T QSEGYGF+EF +RA A
Sbjct: 111 APEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMA 170
Query: 127 ERILQTYNGTIMPNGGQNFRLNWATFSA---GGERRHDDS-PDYTIFVGDLAADVTDYHL 182
E++LQ +NGT+MPN Q FRLNWATFSA GGERR ++ D ++FVGDLA DVTD L
Sbjct: 171 EKVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAML 230
Query: 183 TEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGP 242
E F ++++S+KGAKVVID T R+KGYGFVRF DESE+ RAMTEM GV CS+RPMR+G
Sbjct: 231 QETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGV 290
Query: 243 AANKN--------------LGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTD 288
A K L G G A +QG Q+E D NNTTIFVG LD +++D
Sbjct: 291 ATPKKTYGNPQQYSSQAVVLAGGGGHSNGAM---AQGSQSEGDSNNTTIFVGGLDSDISD 347
Query: 289 DHLRQVFGLYGDLVHVKIPQGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSP 348
+ LRQ F +GD++ VKIP GK CGFVQ ADR AEEA++ LNGT++G Q VRLSWGRSP
Sbjct: 348 EDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSP 407
Query: 349 SNKQTQSD 356
NK ++D
Sbjct: 408 GNKHGRND 415
>IMGA|CU457783_12.3 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 29353518-29349911 E
EGN_Mt071002 20080227
Length = 420
Score = 350 bits (897), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 175/292 (59%), Positives = 213/292 (72%), Gaps = 7/292 (2%)
Query: 72 RTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQ 131
+TLW+GDL +WMDENYL++CFA TGE+ ++KVIRNK T Q+EGYGF+EFTS AE++LQ
Sbjct: 93 KTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQ 152
Query: 132 TYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYN 191
TY G +MPN Q FRLNWATFS G +R D+ PD +IFVGDLAADVTD L E F +Y
Sbjct: 153 TYAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFSDKYP 212
Query: 192 SVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAA-NKNLGT 250
SVK AKVV D T R+KGYGFVRF D+ E+ +A+ EM GV CS+R MRIG A K+ G
Sbjct: 213 SVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAMRIGAATPRKSSGY 272
Query: 251 GTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGK 310
G Q N Q++ D NTTIFVG LDP+ T + LRQ F YG++V VKIP GK
Sbjct: 273 QQGGQ-----SNGTPSQSDTDSTNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVKIPVGK 327
Query: 311 RCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQTQSD-PSQWN 361
CGFVQFA+R+ AEEAL+ LNGT +G Q VRLSWGR+P+NKQ +S+ S WN
Sbjct: 328 GCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQFRSEFGSPWN 379
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 273 NNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRC------GFVQFADRSCAEEA 326
+N T++VG+L + +++L + F G++ +K+ + K+ GFV+F AE+
Sbjct: 91 DNKTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKV 150
Query: 327 LRVLNGTLLGG--QNVRLSWGRSPSNKQTQSD 356
L+ G L+ Q RL+W + +SD
Sbjct: 151 LQTYAGMLMPNTEQPFRLNWATFSTGDHKRSD 182
>IMGA|AC146330_10.5 RNA-binding region RNP-1 (RNA recognition motif)
chr02_pseudomolecule_IMGAG_V2 23524883-23519252 F
EGN_Mt071002 20080227
Length = 428
Score = 340 bits (872), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 218/322 (67%), Gaps = 35/322 (10%)
Query: 69 DEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAER 128
+EVRTLWIGDLQYW+DENYL CF+HTGE+ ++K+IRNK T Q EGYGF+EF S + AER
Sbjct: 12 EEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAER 71
Query: 129 ILQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRT 188
+LQTYNGT MP Q FRLNWA+F GERR D PD++IFVGDLA DVTDY L E FRT
Sbjct: 72 VLQTYNGTQMPGTEQTFRLNWASFGI-GERRPDAGPDHSIFVGDLAPDVTDYLLQETFRT 130
Query: 189 RYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNL 248
Y SV+GAKVV D T R+KGYGFV+F+DESE+ RAM+EM GV CSTRPMRI A K
Sbjct: 131 HYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKT 190
Query: 249 GTGTGTQ------------------PKASYQNSQGPQN----ENDPNNTTIFVGNLDPNV 286
TG Q P +Y + P N E D NNTTI+VGNLD NV
Sbjct: 191 ---TGYQQNPYAAVVAAAPVPKAIYPVPAY--TTAPVNTVPPEYDVNNTTIYVGNLDLNV 245
Query: 287 TDDHLRQVFGLYGDLVHVKIPQGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGR 346
+++ L+Q F +G++V VK+ GK CGFVQF R+ AEEA++ + G +LG Q +R+SWGR
Sbjct: 246 SEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGR 305
Query: 347 SPSNKQ-------TQSDPSQWN 361
+ +Q Q D SQW+
Sbjct: 306 PQTARQDVPGGWGQQVDQSQWS 327
>IMGA|CT868696_6.4 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 30876631-30887902 E
EGN_Mt071002 20080227
Length = 436
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 152/326 (46%), Gaps = 50/326 (15%)
Query: 71 VRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERIL 130
R++++G++ + + L + F G LA K+IR + ++ YGF+++ RA A +
Sbjct: 33 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 88
Query: 131 QTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRY 190
T +G + GQ ++NWA ++ R D S + +FVGDL+ +VTD L F Y
Sbjct: 89 MTLHGRQLY--GQALKVNWAYANS---SREDTSGHFNVFVGDLSPEVTDATLFACFSV-Y 142
Query: 191 NSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGT 250
+ A+V+ D T R+KGYGFV F D + A+ +M G R +R A K G
Sbjct: 143 TTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCN-WATKGAGG 201
Query: 251 GTGTQPKASYQN--------SQGPQN-------ENDPNNTTIFVGNLDPN---------- 285
+ + QN S G Q+ EN+P+ TT++VGNL +
Sbjct: 202 SSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDTALGGQLQCG 261
Query: 286 ------------VTDDHLRQVFGLYGD--LVHVKIPQGKRCGFVQFADRSCAEEALRVLN 331
VT L F G L V++ GK GFV++ A A+++ N
Sbjct: 262 MAAVLAVTAACLVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMAN 321
Query: 332 GTLLGGQNVRLSWGRSPSNKQTQSDP 357
G + G+ ++ SWG P+ T S+P
Sbjct: 322 GRPVRGKTMKCSWGSKPTPPGTASNP 347
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 161 DDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESE 220
D S +++VG++ +VTD L EVF++ + G K++ +S YGFV + D +
Sbjct: 29 DASACRSVYVGNIHVNVTDKLLAEVFQSA-GPLAGCKLIRKEKSS----YGFVDYHDRAS 83
Query: 221 QVRAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVG 280
A+ + G + +++ A Y NS E+ + +FVG
Sbjct: 84 AALAIMTLHGRQLYGQALKVNWA----------------YANS---SREDTSGHFNVFVG 124
Query: 281 NLDPNVTDDHLRQVFGLYGDLVHVKIP------QGKRCGFVQFADRSCAEEALRVLNGTL 334
+L P VTD L F +Y ++ + K GFV F D A+ A+ + G
Sbjct: 125 DLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKW 184
Query: 335 LGGQNVRLSW 344
LG + +R +W
Sbjct: 185 LGNRQIRCNW 194
>IMGA|AC144483_30.5 RNA-binding region RNP-1 (RNA recognition motif)
chr08_pseudomolecule_IMGAG_V2 31240580-31235784 E
EGN_Mt071002 20080227
Length = 402
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 39/308 (12%)
Query: 71 VRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERIL 130
R++++G++ + E L + F+ G L K+IR + ++ YGF+++ R+ A +
Sbjct: 45 CRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSAAIAI 100
Query: 131 QTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRY 190
T NG + GQ+ ++NWA ++ G +R D S + IFVGDL+ +VTD L F + Y
Sbjct: 101 VTLNGRNI--FGQSIKVNWA-YTRG--QREDTSGHFHIFVGDLSPEVTDATLYACF-SAY 154
Query: 191 NSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPA---ANKN 247
+S A+V+ D+ T R++G+GF E A+ ++ G +R +R A AN N
Sbjct: 155 SSCSDARVMWDQKTGRSRGFGF-------EAQSAINDLTGKWLGSRQIRCNWATKGANMN 207
Query: 248 LGTGTGTQPKASYQNSQGPQNE-----------NDPNNTTIFVGNLDPN-----VTDDHL 291
G ++ K+ + + G E +P TT++VGNL P VT L
Sbjct: 208 -GENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEARIHTVTSVDL 266
Query: 292 RQVFGLYG--DLVHVKIPQGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPS 349
F G + V++ + K GFV+++ A A+++ N L G+ ++ SWG P+
Sbjct: 267 HHHFHALGVGTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKCSWGSKPT 326
Query: 350 NKQTQSDP 357
T S P
Sbjct: 327 PPGTASTP 334
>IMGA|AC136449_16.5 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 29317773-29312110 F
EGN_Mt071002 20080227
Length = 654
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 29/265 (10%)
Query: 73 TLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQT 132
+L++GDL + ++ LY F G++ +V+V R+ T +S GYG++ +++ A R L
Sbjct: 35 SLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 94
Query: 133 YNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNS 192
N T P + R+ ++ + S IF+ +L + L + F + + +
Sbjct: 95 LNFT--PLNNRPIRIMYSHRDPSIRK----SGQGNIFIKNLDKAIDHKALHDTF-SSFGN 147
Query: 193 VKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGT 252
+ KV +D + ++KGYGFV+F E +A+ ++ G++ + + + +GP K T
Sbjct: 148 ILSCKVAVDG-SGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQEREST 206
Query: 253 GTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQ---G 309
G +A + N +FV NL + TDD L++ FG +G + + + G
Sbjct: 207 GD--RAKFNN--------------VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDG 250
Query: 310 K-RC-GFVQFADRSCAEEALRVLNG 332
K +C GFV F A A+ LNG
Sbjct: 251 KSKCFGFVNFESTDDAARAVEALNG 275
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 136/288 (47%), Gaps = 18/288 (6%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
++I +L +D L+ F+ G + + KV + + QS+GYGF++F + A++ ++
Sbjct: 124 IFIKNLDKAIDHKALHDTFSSFGNILSCKVAVD-GSGQSKGYGFVQFDTEEAAQKAIEKL 182
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRH--DDSPDYTIFVGDLAADVTDYHLTEVFRTRYN 191
NG ++ + ++ F ER D + +FV +L+ TD L + F +
Sbjct: 183 NGMLL----NDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKKTF-GEFG 237
Query: 192 SVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTG 251
++ A V+ D ++K +GFV F + RA+ + G + +G A K +
Sbjct: 238 TITSAVVMRDG-DGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKK---SE 293
Query: 252 TGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKI---PQ 308
+ K ++ S + + ++V NLD ++ D+ L+++F YG + K+ P
Sbjct: 294 REHELKIKFEQSMK-EAADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPN 352
Query: 309 G--KRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQTQ 354
G + GFV F+ A AL +NG ++ + + ++ + +++ +
Sbjct: 353 GVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKEDRRAR 400
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 167 TIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMT 226
+++VGDL +VTD L ++F + V +V D T R+ GYG+V +++ + RA+
Sbjct: 35 SLYVGDLDMNVTDSQLYDLF-NQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 93
Query: 227 EMQGVVCSTRPMRI-----GPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGN 281
+ + RP+RI P+ K +G G IF+ N
Sbjct: 94 VLNFTPLNNRPIRIMYSHRDPSIRK---SGQGN----------------------IFIKN 128
Query: 282 LDPNVTDDHLRQVFGLYGDLVHVKIP-----QGKRCGFVQFADRSCAEEALRVLNGTLLG 336
LD + L F +G+++ K+ Q K GFVQF A++A+ LNG LL
Sbjct: 129 LDKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLN 188
Query: 337 GQNVRLSWGRSPSNKQTQSDPSQWNN 362
+ V + +++ D +++NN
Sbjct: 189 DKQVYVGPFLRKQERESTGDRAKFNN 214
>IMGA|AC174301_43.4 Polyadenylate binding protein, human types 1, 2,
3, 4 chr01_pseudomolecule_IMGAG_V2 14998974-14995422 E
EGN_Mt071002 20080227
Length = 534
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 29/271 (10%)
Query: 73 TLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQT 132
TL++GDL + + LY+ F+ L + +V ++ T +S YG++ +S A R ++
Sbjct: 16 TLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAIRAIEL 75
Query: 133 YNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNS 192
N + + G+ R+ W + A + S +FV +LAA + + L ++F+ +Y +
Sbjct: 76 KNHSSL--NGKVIRVMWLSRDADARK----SGKGNVFVKNLAASIDNVGLHDLFQ-KYGN 128
Query: 193 VKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGT 252
+ +K+ ++KG+G+++F E A+ +M G + + +G K
Sbjct: 129 ILSSKIARSE-DGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVGKFIRK------ 181
Query: 253 GTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIP----- 307
S+ + D T ++V NLDP VT+ HL + F +G +V + I
Sbjct: 182 ----------SERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENG 231
Query: 308 QGKRCGFVQFADRSCAEEALRVLNGTLLGGQ 338
Q K GFV + A A+ ++G+ G +
Sbjct: 232 QSKGFGFVNYDSPDDARRAMEAMDGSQFGSK 262
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 38/276 (13%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
+++ +L +D L+ F G + + K+ R+++ +S+G+G+++F S A +Q
Sbjct: 105 VFVKNLAASIDNVGLHDLFQKYGNILSSKIARSED-GKSKGFGYIQFDSEESANVAIQKM 163
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRHDD-SPDYT-IFVGDLAADVTDYHLTEVFRTRYN 191
NG+ + ++ ++ F ER D +T ++V +L VT+ HL E F + +
Sbjct: 164 NGSTV----RDKQIYVGKFIRKSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSS-FG 218
Query: 192 SVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANK----- 246
+ + D ++KG+GFV + + RAM M G ++ + + A K
Sbjct: 219 KIVSLAIKKDE-NGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQ 277
Query: 247 ---NLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVH 303
+L G + S I+V N+D +V D+ LR F G+++
Sbjct: 278 ILHHLFVEKGLKHMGS----------------NIYVKNIDTSVGDEELRDHFSACGEVLS 321
Query: 304 VKIPQ-----GKRCGFVQFADRSCAEEALRVLNGTL 334
K+ + K GFV F+ A +++ NG L
Sbjct: 322 AKVMRDDKGTSKGFGFVCFSTVVEAFKSMSCFNGEL 357
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 163 SPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQV 222
SP T++VGDL +DVTD L + F + +N++ A+V D T ++ YG+V + E +
Sbjct: 12 SPAATLYVGDLHSDVTDAQLYKAF-SEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAI 70
Query: 223 RAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNL 282
RA+ E+ KN + G + + + ++ N +FV NL
Sbjct: 71 RAI-EL-----------------KNHSSLNGKVIRVMWLSRDADARKSGKGN--VFVKNL 110
Query: 283 DPNVTDDHLRQVFGLYGDLVHVKIP-----QGKRCGFVQFADRSCAEEALRVLNGT 333
++ + L +F YG+++ KI + K G++QF A A++ +NG+
Sbjct: 111 AASIDNVGLHDLFQKYGNILSSKIARSEDGKSKGFGYIQFDSEESANVAIQKMNGS 166
>IMGA|AC148486_23.5 Ribosomal protein S2; Polyadenylate binding
protein, human types 1, 2, 3, 4
chr01_pseudomolecule_IMGAG_V2 6658115-6663331 F
EGN_Mt071002 20080227
Length = 647
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 29/265 (10%)
Query: 73 TLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQT 132
+L++GDL+ ++++ LY F G++ +V+V R+ T +S GYG++ FT+ A R L
Sbjct: 33 SLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDV 92
Query: 133 YNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNS 192
N T M N ++ R+ ++ + S IF+ +L + L + F + +
Sbjct: 93 LNFTPMNN--KSIRVMYSHRDPSSRK----SGTANIFIKNLDKTIDHKALHDTF-SSFGQ 145
Query: 193 VKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGT 252
+ K+ D + ++KGYGFV+F E A+ ++ G++ + + + +G K
Sbjct: 146 IMSCKIATDG-SGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRK------ 198
Query: 253 GTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDL---VHVKIPQG 309
Q+ ++ NN ++V NL + T+D L+ FG YG + V ++ G
Sbjct: 199 --------QDRDNVLSKTKFNN--VYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADG 248
Query: 310 K-RC-GFVQFADRSCAEEALRVLNG 332
+ +C GFV F + A +A+ LNG
Sbjct: 249 RSKCFGFVNFENAEDAAKAVEALNG 273
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 27/274 (9%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
++I +L +D L+ F+ G++ + K I + QS+GYGF++F + A+ +
Sbjct: 122 IFIKNLDKTIDHKALHDTFSSFGQIMSCK-IATDGSGQSKGYGFVQFEAEDSAQNAIDKL 180
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRHDDSPDY-------TIFVGDLAADVTDYHLTEVF 186
NG ++ N Q F G R D + ++V +L+ T+ L F
Sbjct: 181 NGMLI-NDKQVF--------VGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEF 231
Query: 187 RTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANK 246
Y ++ A V++ R+K +GFV F + + +A+ + G + +G A K
Sbjct: 232 GA-YGTITSA-VLMRDADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKK 289
Query: 247 NLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKI 306
+ + K ++ + + +++ NLD ++TD+ L+++F +G + KI
Sbjct: 290 ---SEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKI 346
Query: 307 ---PQG--KRCGFVQFADRSCAEEALRVLNGTLL 335
P G + GFV F+ A AL +NG ++
Sbjct: 347 MRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMI 380
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 26/179 (14%)
Query: 167 TIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMT 226
+++VGDL +V D L ++F + V +V D T R+ GYG+V F + + RA+
Sbjct: 33 SLYVGDLEVNVNDSQLYDLF-NQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALD 91
Query: 227 EMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNV 286
+ + + +R+ + +GT IF+ NLD +
Sbjct: 92 VLNFTPMNNKSIRVMYSHRDPSSRKSGT--------------------ANIFIKNLDKTI 131
Query: 287 TDDHLRQVFGLYGDLVHVKIP-----QGKRCGFVQFADRSCAEEALRVLNGTLLGGQNV 340
L F +G ++ KI Q K GFVQF A+ A+ LNG L+ + V
Sbjct: 132 DHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQV 190
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
+++ +L E+ L F G + + ++R+ + +S+ +GF+ F + A + ++
Sbjct: 213 VYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDAD-GRSKCFGFVNFENAEDAAKAVEAL 271
Query: 134 NGTIMPNG----GQNFRLNWATFSAGG-------ERRHDDSPDYTIFVGDLAADVTDYHL 182
NG + + G+ + + G E D +++ +L +TD L
Sbjct: 272 NGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKL 331
Query: 183 TEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGP 242
E+F + + ++ K++ D ++G GFV F+ E RA+ EM G + ++P+ +
Sbjct: 332 KEMF-SEFGTITSYKIMRDP-NGVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAV 389
Query: 243 AANK 246
A K
Sbjct: 390 AQRK 393
>IMGA|AC122728_50.4 Polyadenylate binding protein, human types 1, 2,
3, 4 chr03_pseudomolecule_IMGAG_V2 29868052-29861846 E
EGN_Mt071002 20080227
Length = 414
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 33/274 (12%)
Query: 67 TPDEVRT--LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRA 124
P+++ T L++GDL + + ++ LY F G++ +V++ R+ + QS GYG++ F++
Sbjct: 17 VPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPH 76
Query: 125 GAERILQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTE 184
A + + N T P + R+ ++ + S IF+ +L + L +
Sbjct: 77 DAAKAMDVLNFT--PLNNKPIRIMYSHRDPSVRK----SGAANIFIKNLDRAIDHKALYD 130
Query: 185 VFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAA 244
F + ++ K+ +D + +KGYGFV+F +E A+ ++ G++ + +P+ +G
Sbjct: 131 TFSI-FGNILSCKIAMDA-SGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVG--- 185
Query: 245 NKNLGTGTGTQPKASYQNSQGPQNE-NDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDL-- 301
+Q Q N ++ ++V NL +VTDD L+ FG YG +
Sbjct: 186 --------------HFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITS 231
Query: 302 -VHVKIPQGK-RC-GFVQFADRSCAEEALRVLNG 332
V ++ GK +C GFV F + A EA+ LNG
Sbjct: 232 AVVMRDVDGKSKCFGFVNFENADAAAEAVEALNG 265
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 28/277 (10%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
++I +L +D LY F+ G + + K+ + + S+GYGF++F + A+ +
Sbjct: 114 IFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDA-SGLSKGYGFVQFENEESAQSAIDKL 172
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRHDDSPDY-------TIFVGDLAADVTDYHLTEVF 186
NG + LN G +R D + ++V +L+ VTD L F
Sbjct: 173 NGML---------LNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTF 223
Query: 187 RTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANK 246
Y ++ A VV+ + ++K +GFV F + A+ + G + +G A K
Sbjct: 224 -GEYGTITSA-VVMRDVDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALKK 281
Query: 247 NLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKI 306
+ K ++ S + + +++ NLD +VTD+ L ++F +G + KI
Sbjct: 282 ---YERELELKERHEQSM-KETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKI 337
Query: 307 ---PQG--KRCGFVQFADRSCAEEALRVLNGTLLGGQ 338
PQG + GFV F+ A AL +NG ++ G+
Sbjct: 338 LRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGK 374
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 36/206 (17%)
Query: 167 TIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMT 226
+++VGDL DVTD L ++F + V ++ D + ++ GYG+V F++ + +AM
Sbjct: 25 SLYVGDLDHDVTDSQLYDLF-NQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMD 83
Query: 227 EMQGVVCSTRPMRI-----GPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGN 281
+ + +P+RI P+ K+ G N IF+ N
Sbjct: 84 VLNFTPLNNKPIRIMYSHRDPSVRKS-----------------GAAN--------IFIKN 118
Query: 282 LDPNVTDDHLRQVFGLYGDLVHVKIPQ-----GKRCGFVQFADRSCAEEALRVLNGTLLG 336
LD + L F ++G+++ KI K GFVQF + A+ A+ LNG LL
Sbjct: 119 LDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLN 178
Query: 337 GQNVRLSWGRSPSNKQTQSDPSQWNN 362
+ V + + ++ +++NN
Sbjct: 179 DKPVYVGHFQRKQDRDNALSNAKFNN 204
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
+++ +L + ++ L F G + + V+R+ + +S+ +GF+ F + A ++
Sbjct: 205 VYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVD-GKSKCFGFVNFENADAAAEAVEAL 263
Query: 134 NGTIMPNG----GQNFRLNWATFSAGGERRHDDSPDYTI--------FVGDLAADVTDYH 181
NG + G+ + + RH+ S T+ ++ +L VTD
Sbjct: 264 NGKKFDDKEWYVGKALKKYERELEL--KERHEQSMKETVDKFYGANLYLKNLDDSVTDEK 321
Query: 182 LTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIG 241
L+E+F + + +V K++ D ++G GFV F+ E RA+ EM G + + +P+ +
Sbjct: 322 LSELF-SEFGTVTSCKILRDP-QGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVA 379
Query: 242 PAANK 246
PA K
Sbjct: 380 PAQKK 384
>IMGA|AC202362_16.3 RNA-binding region RNP-1 (RNA recognition
motif); Calcium-binding EF-hand
chr01_pseudomolecule_IMGAG_V2 218619-221289 E
EGN_Mt071002 20080227
Length = 311
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 72 RTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQ 131
R L++G+L + + + L Q F G + +V+++ + TN+S G+ F+ + AE ++
Sbjct: 108 RRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDAEEAIR 167
Query: 132 TYNGTIMPNGGQNFRLNWATFSAGGERR--------HDDSPDYTIFVGDLAADVTDYHLT 183
++GT + GG+ ++N+ G+R + DSP + I+ G+L D+T +L
Sbjct: 168 MFDGTTV--GGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSP-HKIYAGNLGWDMTSQYLR 224
Query: 184 EVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPA 243
+ F + + AKVV +R +++GYGFV F + A++ M GV RP+R+ A
Sbjct: 225 KAF-AKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRPLRLKLA 283
Query: 244 AN 245
+
Sbjct: 284 VD 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 27/196 (13%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTE 227
+FVG+L ++ L ++F N V +++ D +T+R++G+ FV + + A+
Sbjct: 110 LFVGNLPFSLSSSQLAQLFGEAGNVVS-VEILYDDITNRSRGFAFVTMGNVEDAEEAIRM 168
Query: 228 MQGVVCSTRPMRIG----PAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLD 283
G R +++ P K + G+ + Y +S P I+ GNL
Sbjct: 169 FDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYR---GYVDS--PHK--------IYAGNLG 215
Query: 284 PNVTDDHLRQVFGLYGDLVHVKIP------QGKRCGFVQFADRSCAEEALRVLNGTLLGG 337
++T +LR+ F L+ K+ + + GFV F E AL +NG + G
Sbjct: 216 WDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQG 275
Query: 338 QNVRLSWG---RSPSN 350
+ +RL R PS+
Sbjct: 276 RPLRLKLAVDNRKPSS 291
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 262 NSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIP------QGKRCGFV 315
NS Q + +FVGNL +++ L Q+FG G++V V+I + + FV
Sbjct: 95 NSDLNQEAESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFV 154
Query: 316 QFADRSCAEEALRVLNGTLLGGQNVRLSWGRSP 348
+ AEEA+R+ +GT +GG+ +++++ P
Sbjct: 155 TMGNVEDAEEAIRMFDGTTVGGRAIKVNFPEVP 187
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 69 DEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAER 128
D ++ G+L + M YL + FA L + KV+ +N +S GYGF+ F + E
Sbjct: 204 DSPHKIYAGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEV 263
Query: 129 ILQTYNGTIMPNGGQNFRLNWAT 151
L NG + G+ RL A
Sbjct: 264 ALSAMNGVEVQ--GRPLRLKLAV 284
>IMGA|AC174312_11.5 RNA-binding region RNP-1 (RNA recognition motif)
chr01_pseudomolecule_IMGAG_V2 11950732-11953538 F
EGN_Mt071002 20080227
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
L+ G+L Y +D L G ++V+ +++T +S G+ F+ + ++Q
Sbjct: 115 LYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNL 174
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSV 193
+G G+ R+N++ E + ++ +Y +FVG+LA VT LT+ F+ + +V
Sbjct: 175 DGKEFM--GRTLRVNFSDKPKPKEPLYPET-EYKLFVGNLAWTVTSESLTQAFQ-EHGTV 230
Query: 194 KGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANK 246
GA+V+ D T +++GYGFV +A +SE A+ M V R +R+ A K
Sbjct: 231 VGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQGK 283
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 26/199 (13%)
Query: 155 GGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVR 214
GGE + ++ G+L V D L Y S + +V+ DR T +++G+ FV
Sbjct: 102 GGETVAEVDTRTKLYFGNLPYSV-DSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVT 160
Query: 215 FADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNN 274
+ + + + G R +R+ ++ + P+ P
Sbjct: 161 MSCVEDCNAVIQNLDGKEFMGRTLRV------------------NFSDKPKPKEPLYPET 202
Query: 275 T-TIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIP------QGKRCGFVQFADRSCAEEAL 327
+FVGNL VT + L Q F +G +V ++ + + GFV +A +S + AL
Sbjct: 203 EYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTAL 262
Query: 328 RVLNGTLLGGQNVRLSWGR 346
+++ L G+ +R+S +
Sbjct: 263 AIMDNVELEGRTLRVSLAQ 281
>IMGA|AC150977_25.5 RNA-binding region RNP-1 (RNA recognition motif)
chr01_pseudomolecule_IMGAG_V2 14333004-14330524 F
EGN_Mt071002 20080227
Length = 280
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
L++G+L + +D L + F + G++ V+VI +K+T +S G+GF+ +S A E Q
Sbjct: 86 LFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQL 145
Query: 134 NGTIMPNGGQNFRLNW-------ATFSAGGE--RRHDDSP-----------DYTIFVGDL 173
NG ++ G+ R+N + S GE R D P D + VG+L
Sbjct: 146 NGYVV--DGRELRVNAGPPPPPRSENSRFGENPRFGGDRPRGPPRGGSSDGDNRVHVGNL 203
Query: 174 AADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVC 233
A V + L +F + V AKV+ DR + R++G+GFV F+ E A+ + G
Sbjct: 204 AWGVDNLALESLFGEQ-GQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIRTLDGADL 262
Query: 234 STRPMRIGPAANK 246
+ R +R+ PA ++
Sbjct: 263 NGRAIRVSPADSR 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 161 DDSPDYT----IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFA 216
DD+P Y+ +FVG+L V L E+F V+ +V+ D+ T R++G+GFV +
Sbjct: 75 DDTPSYSPNQRLFVGNLPFSVDSAQLAEIFEN-AGDVEMVEVIYDKSTGRSRGFGFVTMS 133
Query: 217 DESEQVRAMTEMQGVVCSTRPMRIG---PAANKNLGTGTGTQPKASYQNSQGP-QNENDP 272
+E A ++ G V R +R+ P ++ + G P+ +GP + +
Sbjct: 134 SAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGGDRPRGPPRGGSSD 193
Query: 273 NNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRCG------FVQFADRSCAEEA 326
+ + VGNL V + L +FG G ++ K+ + G FV F+ + A
Sbjct: 194 GDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSA 253
Query: 327 LRVLNGTLLGGQNVRLSWGRSPSNKQ 352
+R L+G L G+ +R+S S +Q
Sbjct: 254 IRTLDGADLNGRAIRVSPADSRPKRQ 279
>IMGA|AC139882_12.5 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 15467244-15472639 E
EGN_Mt071002 20080227
Length = 379
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 73 TLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQT 132
T ++G+L + E L++ F G + V V +++ TNQ +GYGF+EF S A+ ++
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKV 85
Query: 133 YNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNS 192
N + G+ R+N A+ + + +F+G+L DV + L + F
Sbjct: 86 LNMIKL--YGKPIRVNKAS-----QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
Query: 193 VKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKN 247
V K++ D T ++G+GF+ + A+ M G R + + A K+
Sbjct: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKD 193
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 33/199 (16%)
Query: 156 GERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRF 215
G+ + + D T +VG+L +++ L E+F + V V DR+T++ +GYGFV F
Sbjct: 15 GQHSAERNQDATAYVGNLDPQISEELLWELF-VQAGPVVNVYVPKDRVTNQHQGYGFVEF 73
Query: 216 ADESEQVRAMTEMQGVVCSTRPMRIGPAA--NKNLGTGTGTQPKASYQNSQGPQNENDPN 273
E + A+ + + +P+R+ A+ K+L G
Sbjct: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG---------------------- 111
Query: 274 NTTIFVGNLDPNVTDDHLRQVFGLYGDLV-HVKIPQ------GKRCGFVQFADRSCAEEA 326
+F+GNLDP+V + L F +G +V + KI + + GF+ + ++ A
Sbjct: 112 -ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSA 170
Query: 327 LRVLNGTLLGGQNVRLSWG 345
+ +NG L + + +S+
Sbjct: 171 IEAMNGQYLCNRQITVSYA 189
>IMGA|AC139854_19.4 RNA-binding region RNP-1 (RNA recognition motif)
chr07_pseudomolecule_IMGAG_V2 28119974-28114016 F
EGN_Mt071002 20080227
Length = 477
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 130/299 (43%), Gaps = 44/299 (14%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
++IG + + E L GE+A V+V++ K +++GY F+ F ++ A + L+
Sbjct: 103 VYIGGIPHETSEKDLRVFCQSVGEVAEVRVMKGK---EAKGYAFVTFKTKELASKALKEL 159
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSV 193
N + G+ + + + + +F+G + + T + +V V
Sbjct: 160 NNSEF--KGRKIKCSPSQVK------------HRLFIGSVPKEWTVEDMKKVVAKVGPGV 205
Query: 194 KGAKVVID-RLTSRTKGYGFVRFADES--EQVRAMTEMQGVVCSTRPMRIGPAANKNLGT 250
+++ D + +SR +G+ F+ + + + E R + A +N +
Sbjct: 206 ISVELLKDPQSSSRNRGFAFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSES 265
Query: 251 GTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGK 310
+ +Q KA ++V NL N+T + L+++F +G + V +P K
Sbjct: 266 SSSSQVKA------------------VYVKNLPENITQNRLKELFEHHGKITKVALPPAK 307
Query: 311 ------RCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQTQSDPSQWNNS 363
R GFV FADRS A +AL+ + GQ + S + +++++ + +N++
Sbjct: 308 AGQEKSRYGFVHFADRSSAMKALKNTEKYEINGQTLECSLAKPQADQKSSGASNSFNSA 366
>IMGA|AC158464_2.5 RNA-binding region RNP-1 (RNA recognition motif);
RNA recognition motif 2 chr02_pseudomolecule_IMGAG_V2
13462757-13456252 E EGN_Mt071002 20080227
Length = 865
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 37/197 (18%)
Query: 157 ERRHDDSPDYTIFVGDLAADVTDYHLTEVF------RTRYNSVKGAKVVIDRLTSRTKGY 210
E + + P T+FV ++ ++V D L +F RT Y + K +G+
Sbjct: 187 EHPYGEHPSRTLFVRNINSNVEDTELRTLFEQYGDIRTLYTACK------------HRGF 234
Query: 211 GFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNEN 270
+ + D AM +Q R + I + K+ P ++
Sbjct: 235 VMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD-----------------NPSDK- 276
Query: 271 DPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVK-IPQGKRCGFVQFADRSCAEEALRV 329
D N T+ V NLDP+V+++ LRQ+FG YG++ ++ P + F+++ D AE AL+
Sbjct: 277 DINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKS 336
Query: 330 LNGTLLGGQNVRLSWGR 346
LN + + G+ ++L R
Sbjct: 337 LNRSDIAGKRIKLEPSR 353
>IMGA|AC157373_30.4 RNA-binding region RNP-1 (RNA recognition motif)
chr07_pseudomolecule_IMGAG_V2 1636778-1642537 E
EGN_Mt071002 20080227
Length = 541
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 123/297 (41%), Gaps = 43/297 (14%)
Query: 68 PDEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAE 127
P +++G + L + GE+ V++ + K+ +++ G+ F+ + S A
Sbjct: 231 PHHKSEVYVGGIPLDAKTEDLKEFCECIGEVVQVRIFKGKDASENRGFAFVTYRSIELAS 290
Query: 128 RILQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFR 187
+ ++ N T F AG + +F+G++ + L +V
Sbjct: 291 KAIKELNNT--------------EFKAGKIKCSKSQAKSRLFIGNIPRSWGEKDLKKVVS 336
Query: 188 TRYNSVKGAKVVID-RLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANK 246
V +++ D + S +GY F+ + + + +M ++ ++G
Sbjct: 337 DIGPGVTAVELIKDMKNISNNRGYAFIDYHNNQCAEYSRQKM-----TSPSFKLG----D 387
Query: 247 NLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKI 306
N T +PK + ++ E ++V NL NVT + L+++F +G + V +
Sbjct: 388 NFPTVNWAEPKNADSSASSQVKE-------VYVKNLPKNVTKEQLKKLFEHHGKITKVVL 440
Query: 307 PQGK------RCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQTQSDP 357
P K R GFV FA+RS A +AL+ +L GQ + S + Q+DP
Sbjct: 441 PPPKPGQEKNRIGFVHFAERSNAMKALKNTEKYVLDGQILECSLAKQ------QADP 491
>IMGA|AC137522_14.4 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 33036485-33042576 F
EGN_Mt071002 20080227
Length = 567
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 167 TIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMT 226
T+F + T+ + E F ++ V+ ++++DR + R+KG G++ F D + V
Sbjct: 203 TVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIEFYD-AMSVPMAI 260
Query: 227 EMQGVVCSTRPMRIGPA-ANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPN 285
+ G + +P+ + P+ A KNL + A GP D ++VGNL N
Sbjct: 261 ALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVV----GPYGAVD---RKLYVGNLHFN 313
Query: 286 VTDDHLRQVFGLYGDLVHVKIP------QGKRCGFVQFADRSCAEEALRVLNGTL-LGGQ 338
+T+ +LR++F +G + V++P K GFVQFA A +A + LNG L + G+
Sbjct: 314 MTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHA-KAAQSLNGKLEIAGR 372
Query: 339 NVRLS 343
+++S
Sbjct: 373 TIKVS 377
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 72 RTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEF-------TSRA 124
RT++ + E +Y+ F+ G++ V++I ++N+ +S+G G++EF + A
Sbjct: 202 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIA 261
Query: 125 GAERILQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTE 184
+ ++L + P+ + + S + D ++VG+L ++T+ +L E
Sbjct: 262 LSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLRE 321
Query: 185 VFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVV-CSTRPMRIGPA 243
+F + ++ ++ +D T KG+GFV+FA E +A + G + + R +++
Sbjct: 322 IFEP-FGQIEVVQLPLDMETGHCKGFGFVQFA-HLEHAKAAQSLNGKLEIAGRTIKVSSV 379
Query: 244 ANKNLGTGTGTQPKASYQNSQG 265
+ ++G+ T A + + +G
Sbjct: 380 TD-HVGSQDTTTKSADFDDDEG 400
>IMGA|CU041253_29.4 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 34554315-34559382 E
EGN_Mt071002 20080227
Length = 407
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 17/185 (9%)
Query: 167 TIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMT 226
T+F + T+ + E F ++ V+ ++++DR + R+KG G++ F D + V
Sbjct: 36 TVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIEFYD-AMSVPMAI 93
Query: 227 EMQGVVCSTRPMRIGPA-ANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPN 285
+ G + +P+ + P+ A KNL T A GP D ++VGNL N
Sbjct: 94 ALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVV---GPYGAVD---RKLYVGNLHFN 147
Query: 286 VTDDHLRQVFGLYGDLVHVKIP------QGKRCGFVQFADRSCAEEALRVLNGTL-LGGQ 338
+T+ LR++F +G + V++P K GF+QFA A+ A + LNG L + G+
Sbjct: 148 MTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAA-QSLNGKLEIAGR 206
Query: 339 NVRLS 343
+++S
Sbjct: 207 TIKVS 211
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 72 RTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEF-------TSRA 124
RT++ + E +Y+ F+ G++ V++I ++N+ +S+G G++EF + A
Sbjct: 35 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIA 94
Query: 125 GAERILQTYNGTIMPNGGQ-NFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLT 183
+ ++L + P+ + N + T A G + D ++VG+L ++T+ L
Sbjct: 95 LSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRKLYVGNLHFNMTESQLR 154
Query: 184 EVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVV-CSTRPMRIGP 242
E+F + +V+ ++ +D T KG+GF++FA E +A + G + + R +++
Sbjct: 155 EIFEP-FGTVEVVQLPLDLETGHCKGFGFIQFA-HIEHAKAAQSLNGKLEIAGRTIKVSS 212
Query: 243 AANKNLGTGTGTQPKASYQNSQG 265
A+ ++G+ T A + + +G
Sbjct: 213 VAD-HIGSQDTTTKSADFDDDEG 234
>IMGA|AC203559_11.4 RNA-binding region RNP-1 (RNA recognition motif)
chr06_pseudomolecule_IMGAG_V2 4176093-4171291 E
EGN_Mt071002 20080227
Length = 240
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 165 DYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRA 224
DY +F GDL +V D L++ F TR+ S A+VV D+ T +TKGYGF+ FA+ ++ A
Sbjct: 131 DYRLFCGDLGNEVNDDVLSKAF-TRFPSFNMARVVRDKRTGKTKGYGFISFANPADLAAA 189
Query: 225 MTEMQGVVCSTRPMRI 240
+ EM G RP+++
Sbjct: 190 LKEMNGKYVGNRPIKL 205
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 68 PDEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAE 127
P++ L+ GDL ++++ L + F +V+R+K T +++GYGF+ F + A
Sbjct: 128 PEDDYRLFCGDLGNEVNDDVLSKAFTRFPSFNMARVVRDKRTGKTKGYGFISFANPADLA 187
Query: 128 RILQTYNGTIMPNGGQNFR 146
L+ NG + N R
Sbjct: 188 AALKEMNGKYVGNRPIKLR 206
>IMGA|AC202369_17.3 RNA-binding region RNP-1 (RNA recognition motif)
chr01_pseudomolecule_IMGAG_V2 17195654-17190859 E
EGN_Mt071002 20080227
Length = 240
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 165 DYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRA 224
DY +F GDL +V D L++ F TR+ S A+VV D+ T +TKGYGF+ FA+ ++ A
Sbjct: 131 DYRLFCGDLGNEVNDDVLSKAF-TRFPSFNMARVVRDKRTGKTKGYGFISFANPADLAAA 189
Query: 225 MTEMQGVVCSTRPMRI 240
+ EM G RP+++
Sbjct: 190 LKEMNGKYVGNRPIKL 205
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 68 PDEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAE 127
P++ L+ GDL ++++ L + F +V+R+K T +++GYGF+ F + A
Sbjct: 128 PEDDYRLFCGDLGNEVNDDVLSKAFTRFPSFNMARVVRDKRTGKTKGYGFISFANPADLA 187
Query: 128 RILQTYNGTIMPNGGQNFR 146
L+ NG + N R
Sbjct: 188 AALKEMNGKYVGNRPIKLR 206
>IMGA|AC144431_42.4 RNA-binding region RNP-1 (RNA recognition motif)
chr05_pseudomolecule_IMGAG_V2 6167334-6172171 E
EGN_Mt071002 20080227
Length = 399
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 111/291 (38%), Gaps = 46/291 (15%)
Query: 70 EVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERI 129
E R L + + + +D L + + GEL V++ ++T +S G+G++ F S A+ +
Sbjct: 2 EQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEV 61
Query: 130 LQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRT- 188
L + G + + AT E R IFV + VT+ E FR+
Sbjct: 62 LSGEHVL----GDRMLEVKVATPKE--EMRAPAKKVTRIFVARIPPSVTE----ETFRSH 111
Query: 189 --RYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQ-----GVVC-----STR 236
+Y + + D+ + +G GF+ F + M+E VV R
Sbjct: 112 FEKYGDITDLYMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKAR 171
Query: 237 PMRIGPAANKNLGTGTGT-----QPKASYQNSQGPQNENDPN------------NTTIFV 279
+ P + G G G Y P + P + IFV
Sbjct: 172 EDDVKPTGRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFV 231
Query: 280 GNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKR------CGFVQFADRSCAE 324
G L P + LRQ FG +G + V IP+ + GFV FAD A+
Sbjct: 232 GRLPPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVAD 282
>IMGA|AC148526_13.4 RNA-binding region RNP-1 (RNA recognition motif)
chr02_pseudomolecule_IMGAG_V2 6339165-6343189 E
EGN_Mt071002 20080227
Length = 522
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERIL--- 130
L+IG + + +E+ L Q F + G++ +++++ T ++ G+GF+ F + AER++
Sbjct: 47 LFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVMEK 106
Query: 131 QTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYT------IFVGDLAADVTDYHLTE 184
+G + R + F+ H SP T IFVG LA+ VT+
Sbjct: 107 HVIDGRTVEAKKAVPRDDQNVFTRSNSSSH-GSPAPTPIRTKKIFVGGLASTVTESDFKN 165
Query: 185 VFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADES--EQV--RAMTEMQGVVCSTR---P 237
F ++ ++ V+ D T R +G+GF+ + E E+V + E+ G + + P
Sbjct: 166 YF-DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVP 224
Query: 238 MRIGPAANK 246
+ P+ ++
Sbjct: 225 KDLSPSPSR 233
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTE 227
+F+G ++ D + L + F+ + V A ++ DR T R +G+GFV FAD S R + E
Sbjct: 47 LFIGGISWDTNEDRLRQYFQN-FGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105
Query: 228 MQGVVCST-RPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNV 286
+ T + P ++N+ T S +S G IFVG L V
Sbjct: 106 KHVIDGRTVEAKKAVPRDDQNVFT-------RSNSSSHGSPAPTPIRTKKIFVGGLASTV 158
Query: 287 TDDHLRQVFGLYGDLVHVKI--------PQGKRCGFVQFADRSCAEEALRV----LNGTL 334
T+ + F +G + V + P+G GF+ + E+ L LNG +
Sbjct: 159 TESDFKNYFDQFGTITDVVVMYDHNTQRPRG--FGFITYDSEEAVEKVLHKTFHELNGKM 216
Query: 335 L 335
+
Sbjct: 217 V 217
>IMGA|AC121232_18.4 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 12513934-12509664 E
EGN_Mt071002 20080227
Length = 506
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 70 EVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERI 129
++ L+IG + + DE L + FA GE+ ++R++ T ++ G+GF+ F+ A AER+
Sbjct: 29 DLGKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERV 88
Query: 130 L---QTYNG------TIMPNGGQNFRLNWATFSAGGERRHDDSPDYT--IFVGDLAADVT 178
+ +G +P Q +N T G + P T IFVG L + +T
Sbjct: 89 IIDKHIIDGRTVEAKKAVPRDDQQ-NINRQT----GSVQGSPGPGRTKKIFVGGLPSTIT 143
Query: 179 DYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAM----TEMQGVVCS 234
+ F ++ ++ V+ D T R +G+GF+ + E R + E+ G +
Sbjct: 144 ESDFKMYF-DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVE 202
Query: 235 TRPMRIGPAANKNLGTGTGTQPKASYQN 262
+ A K L G P Y N
Sbjct: 203 VK-----RAVPKELSPGPTRSPLIGYNN 225
>IMGA|AC146743_25.4 U2 auxiliary factor small subunit
chr00_pseudomolecule_IMGAG_V2 2624254-2627959 E
EGN_Mt071002 20080227
Length = 492
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 270 NDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRCGFVQFADRSCAEEALRV 329
D + T++VG LD VT+ LR F +G++ VK+ + C FV + R AE+A
Sbjct: 223 EDESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEE 282
Query: 330 L-NGTLLGGQNVRLSWGRSPSNKQTQSD 356
L N ++ G ++L WGR P + + +SD
Sbjct: 283 LSNKLVIKGLRLKLMWGR-PQSAKPESD 309
>IMGA|AC135100_25.5 WW/Rsp5/WWP; Paraneoplastic encephalomyelitis
antigen chr08_pseudomolecule_IMGAG_V2 29868882-29857777
E EGN_Mt071002 20080227
Length = 735
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 42/215 (19%)
Query: 139 PNGGQNFRLNWATFSAGGERR------HDDSPDYT-------IFVGDLAADVTDYHLTEV 185
P GG F N G++R SPD++ +FVG + T+ + +
Sbjct: 48 PVGGDEFGFNLPPPPLSGQKRGFPFSGRGASPDHSDGGNFAKLFVGSVPRTATEEDIRPL 107
Query: 186 FRTRYNSVKGAKVVIDRLTSRTKGYGFVRFA--DESEQ-VRAMTEMQGVVCSTRPMRIGP 242
F N V+ A ++ DR T + +G F+++A +E++Q +RA+ + P+++
Sbjct: 108 FEEHGNVVEVA-LIKDRKTGQHQGCCFIKYATSEEADQAIRALHNRHTLPGGVGPIQVRY 166
Query: 243 AANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLV 302
A + G Y+ +FVG+L+ + + +VF YG +
Sbjct: 167 ADGERERLGA-----VEYK---------------LFVGSLNKQASVKEVEEVFSKYGRIE 206
Query: 303 HVKI-----PQGKRCGFVQFADRSCAEEALRVLNG 332
V + Q + CGFV+++ R A A+ LNG
Sbjct: 207 DVYLMRDDQKQSRGCGFVKYSHRDMALAAINALNG 241
>IMGA|AC174143_20.4 WW/Rsp5/WWP; Paraneoplastic encephalomyelitis
antigen chr08_pseudomolecule_IMGAG_V2 29672130-29683222
E EGN_Mt071002 20080227
Length = 735
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 42/215 (19%)
Query: 139 PNGGQNFRLNWATFSAGGERR------HDDSPDYT-------IFVGDLAADVTDYHLTEV 185
P GG F N G++R SPD++ +FVG + T+ + +
Sbjct: 48 PVGGDEFGFNLPPPPLSGQKRGFPFSGRGASPDHSDGGNFAKLFVGSVPRTATEEDIRPL 107
Query: 186 FRTRYNSVKGAKVVIDRLTSRTKGYGFVRFA--DESEQ-VRAMTEMQGVVCSTRPMRIGP 242
F N V+ A ++ DR T + +G F+++A +E++Q +RA+ + P+++
Sbjct: 108 FEEHGNVVEVA-LIKDRKTGQHQGCCFIKYATSEEADQAIRALHNRHTLPGGVGPIQVRY 166
Query: 243 AANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLV 302
A + G Y+ +FVG+L+ + + +VF YG +
Sbjct: 167 ADGERERLGA-----VEYK---------------LFVGSLNKQASVKEVEEVFSKYGRIE 206
Query: 303 HVKI-----PQGKRCGFVQFADRSCAEEALRVLNG 332
V + Q + CGFV+++ R A A+ LNG
Sbjct: 207 DVYLMRDDQKQSRGCGFVKYSHRDMALAAINALNG 241
>IMGA|AC126794_33.5 RNA-binding region RNP-1 (RNA recognition
motif); RNA recognition motif 2
chr04_pseudomolecule_IMGAG_V2 34728310-34720782 E
EGN_Mt071002 20080227
Length = 937
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 37/200 (18%)
Query: 162 DSPDYTIFVGDLAADVTDYHLTEVF------RTRYNSVKGAKVVIDRLTSRTKGYGFVRF 215
+ P T+FV ++ + V D+ L +F RT Y + K +G+ + +
Sbjct: 265 EQPSRTLFVRNINSSVEDFELKTLFEQYGDIRTMYTACK------------HRGFVMISY 312
Query: 216 ADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNT 275
D RAM +Q +R + I + PK + E D +
Sbjct: 313 FDLRAAQRAMQALQSKPLRSRKLDIHYSI-----------PKVNAP-------EKDIGHG 354
Query: 276 TIFVGNLDPNVTDDHLRQVFGLYGDLVHV-KIPQGKRCGFVQFADRSCAEEALRVLNGTL 334
T+ + LD +V++D +++FG YG++ + + P+ K F++F D AE ALR LN
Sbjct: 355 TLMLSGLDSSVSNDEFKRIFGFYGEIKDIYEYPEMKHLKFIEFYDVRAAEAALRALNRIE 414
Query: 335 LGGQNVRLSWGRSPSNKQTQ 354
+ G+ ++L G +Q+
Sbjct: 415 IAGKQIKLEPGHPSLMQQSH 434
>IMGA|CT030180_20.5 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 22195567-22197506 E
EGN_Mt071002 20080227
Length = 352
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTE 227
IF+G LA D T + F RY + + ++ DR T R +G+GF+ +AD S + + E
Sbjct: 20 IFIGGLAKDTTLEEFVKYFE-RYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE 78
Query: 228 MQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVT 287
+ + + + I T PK + Q ND IFVG + V+
Sbjct: 79 NH--IINDKQVEI-----------KRTIPKGASQT-------NDFKTKKIFVGGIPATVS 118
Query: 288 DDHLRQVFGLYGDLVHVKI------PQGKRCGFVQFADRSCAEEAL 327
+D L+ F +G++V +I + + GFV F + L
Sbjct: 119 EDELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLL 164
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
++IG L + F GE+ ++++++T + G+GF+ + + ++++Q
Sbjct: 20 IFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE- 78
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSV 193
N I + ++ G + +D IFVG + A V++ L ++F +++ +V
Sbjct: 79 NHII-----NDKQVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSEDEL-KIFFSKHGNV 132
Query: 194 KGAKVVIDRLTSRTKGYGFVRF 215
+++ D T R++G+GFV F
Sbjct: 133 VEHEIIRDHTTKRSRGFGFVVF 154
>IMGA|AC145470_21.4 SWAP/Surp; RNA-binding region RNP-1 (RNA
recognition motif); DNA-binding SAP; Regulation of
nuclear pre-mRNA protein chr08_pseudomolecule_IMGAG_V2
16866675-16855907 E EGN_Mt071002 20080227
Length = 1031
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 265 GPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKI---------PQGKRCGFV 315
G ++ DP T ++VGNL P V ++ L + FG +G + VKI + + CGFV
Sbjct: 176 GSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 235
Query: 316 QFADRSCAEEALRVLNGTLLGGQNVRLSWGRS 347
F +R+ + A + G ++ +++ WG+S
Sbjct: 236 AFMNRADGQAAKDEMQGVVVYEYELKIGWGKS 267
>IMGA|CR955006_36.5 RNA-binding region RNP-1 (RNA recognition motif)
chr05_pseudomolecule_IMGAG_V2 36065353-36070155 E
EGN_Mt071002 20080227
Length = 479
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
L+IG + + +E L + F+ GE+ +++++ T ++ G+GF+ F A A+ ++Q
Sbjct: 8 LFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQEK 67
Query: 134 NGT---------IMPNGGQNF--RLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHL 182
+ +P QN R + + + G R IFVG LA+ VT+
Sbjct: 68 HNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRK-----IFVGGLASTVTESDF 122
Query: 183 TEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADES--EQV--RAMTEMQGVVCSTRPM 238
+ F ++ ++ V+ D T R +G+GF+ + E +QV + E+ G + +
Sbjct: 123 KKYF-DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVK-- 179
Query: 239 RIGPAANKNLGTGTGTQPKASY 260
A K L G P + Y
Sbjct: 180 ---RAVPKELSPGPARSPLSGY 198
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 29/183 (15%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQ---VRA 224
+F+G ++ D + L E F T Y VK A ++ DR T R +G+GFV F D + V+
Sbjct: 8 LFIGGISWDTNEERLREYFST-YGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66
Query: 225 MTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDP 284
+ G + + + P ++N+ + T S S GP IFVG L
Sbjct: 67 KHNIDGRMVEAK--KAVPRDDQNVLSRT----SGSIHGSPGPGRTRK-----IFVGGLAS 115
Query: 285 NVTDDHLRQVFGLYGDLVHVKI--------PQGKRCGFVQFADRSCAEEAL----RVLNG 332
VT+ ++ F +G + V + P+G GF+ + ++ L LNG
Sbjct: 116 TVTESDFKKYFDQFGTITDVVVMYDHNTQRPRG--FGFITYDSEEAVDQVLLKTFHELNG 173
Query: 333 TLL 335
++
Sbjct: 174 KMV 176
>IMGA|AC141435_12.5 RNA-binding region RNP-1 (RNA recognition
motif); RNA recognition motif 2
chr03_pseudomolecule_IMGAG_V2 24665094-24667450 H
EGN_Mt071002 20080227
Length = 524
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 273 NNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVK-IPQGKR-CGFVQFADRSCAEEALRVL 330
N T+ V NLD +V+ D L+QVFG +G + V+ P KR FV+F D AE+AL+ L
Sbjct: 150 NQGTLVVFNLDDDVSSDQLQQVFGAFGAIKEVRDTPWKKRNQSFVEFFDIRDAEKALKEL 209
Query: 331 NGTLLGGQNVRLSWGRSPSNKQTQSDPSQW 360
NG + G+ + + + + K S+P+ +
Sbjct: 210 NGKEINGKPIAIEFSKP---KLFHSEPNAY 236
>IMGA|CT025837_35.4 RNA-binding region RNP-1 (RNA recognition motif)
chr05_pseudomolecule_IMGAG_V2 5873897-5879612 E
EGN_Mt071002 20080227
Length = 340
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 114/293 (38%), Gaps = 54/293 (18%)
Query: 69 DEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAER 128
++VRTL+I L + +Y F + +R+ N N S+ + F F+++ A
Sbjct: 79 NDVRTLFIAGLPEDVKPREIYNLFREFPGYESSH-LRSPN-NSSQAFAFAVFSNQQSAIM 136
Query: 129 ILQTYNGTIMPNGGQNFRLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRT 188
L NG I F L + T+++ DLA
Sbjct: 137 ALHALNGMI-------FDLEKGS---------------TLYI-DLA-------------- 159
Query: 189 RYNS-VKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGV---VCSTRPMRIGPAA 244
+ NS K A++ DR +S K G + + M G+ +T + PA
Sbjct: 160 KSNSRAKRARIDDDRASSDKKARGSASSWPTPDSGVSSIHMPGMGNPAFNTNMIGYPPAQ 219
Query: 245 NKNLGTGTGTQPKASYQNSQGPQNENDPNNTT----IFVGNLDPNVTDDHLRQVFGLYGD 300
+ + G + N + N P NTT +FV NL P+ + L QVF +
Sbjct: 220 SHGIADGNAMH-DGLFLNLKKCSNPYIPTNTTPCATLFVANLGPSCNEQELIQVFSRFPG 278
Query: 301 LVHVKIPQ--GKRCGFVQFADRSCAEEALRVLNGTLL----GGQNVRLSWGRS 347
+ +K+ G FV F D A AL L GT+L G+ +RL + +S
Sbjct: 279 FLKLKMQSTYGAPVSFVDFKDIPSATVALNSLQGTILYSSPAGEGMRLEYAKS 331
>IMGA|AC119413_25.4 RNA-binding region RNP-1 (RNA recognition motif)
chr05_pseudomolecule_IMGAG_V2 11723269-11717829 E
EGN_Mt071002 20080227
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 7/185 (3%)
Query: 72 RTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQ 131
+ L + +L + + + + F G + V++I++K+ + +GY F+ S GA+ +
Sbjct: 96 KNLIVFNLPWSLSKPDIKDLFGQCGTVIDVEIIKSKD-GKGKGYTFVTMDSGEGAQAAVD 154
Query: 132 TYNGTIMPNGGQNFRLNWA----TFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFR 187
+N T + G+ R+ +A Y I+ +LA HL ++F
Sbjct: 155 KFNATEI--SGRILRVEFAKGFKKPRPPPPAPTPKEARYVIYASNLAWKARSTHLRDIFT 212
Query: 188 TRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKN 247
+ + A+VV ++ GYGFV + E E A++ +QG RP+ + + K
Sbjct: 213 ENFKTPVSARVVFQVPGGKSAGYGFVSYHTEEEAEAAISALQGKELLGRPLLVKISERKV 272
Query: 248 LGTGT 252
G+
Sbjct: 273 KEAGS 277
>IMGA|AC140027_27.5 RNA-binding region RNP-1 (RNA recognition motif)
chr01_pseudomolecule_IMGAG_V2 23874434-23871286 F
EGN_Mt071002 20080227
Length = 284
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 70 EVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERI 129
+ + L++ L ++ E L F GEL VKVI +K + +S+GY F+E+T+ A
Sbjct: 190 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAA 249
Query: 130 LQTYNGTIM 138
L+ NG I+
Sbjct: 250 LKEMNGKII 258
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 175 ADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGV--V 232
A + D H ++ + K A++ I ++ +T +GF DE E+ GV V
Sbjct: 97 AQIVD-HYAQILTKIMGNEKDAQMCIYHVSWKT-NFGFCCELDED----CAHELSGVPGV 150
Query: 233 CSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLR 292
S +P + NK+ G + + NS E +FV L ++ LR
Sbjct: 151 LSVQPDDNFESENKDY-EGRNLENSLNMPNSSEASQEASVKTKKLFVTGLSFYTSEKTLR 209
Query: 293 QVFGLYGDLVHVKI------PQGKRCGFVQFADRSCAEEALRVLNGTLLGG 337
F +G+LV VK+ + K F+++ A AL+ +NG ++ G
Sbjct: 210 AAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAALKEMNGKIING 260
>IMGA|AC122162_7.4 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 2878943-2880084 F
EGN_Mt071002 20080227
Length = 134
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTE 227
IFV LA T+ L E F ++Y +V A +V+++ R KG+G+V FA+E E +A
Sbjct: 34 IFVKGLAFSTTEEKLAEAF-SQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQIG 92
Query: 228 MQGVVCSTRPMRIG---PAANKN 247
M G + R + + P KN
Sbjct: 93 MNGKILHGRVLYVDMDPPNEQKN 115
>IMGA|AC134242_14.5 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 19485092-19483974 E
EGN_Mt071002 20080227
Length = 190
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 165 DYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRA 224
+Y FVG LA L + F +++ + +KV+ DR T R++G+GFV FA+E A
Sbjct: 7 EYRCFVGGLAWATDSQALEQAF-SKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDA 65
Query: 225 MTEMQGVVCSTRPMRIGPA 243
+ EM G R + + A
Sbjct: 66 IEEMNGQDIDGRNITVNEA 84
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 75 WIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTYN 134
++G L + D L Q F+ GE+ KVI ++ T +S G+GF+ F ++ N
Sbjct: 11 FVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEEMN 70
Query: 135 GTIMPNGGQNFRLNWA 150
G + G+N +N A
Sbjct: 71 GQDID--GRNITVNEA 84
>IMGA|AC146705_26.5 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 23207650-23209533 F
EGN_Mt071002 20080227
Length = 146
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 159 RHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADE 218
RH S +F+G L+ +V D L + F T Y V A+V+ DR T R++G+GFV F E
Sbjct: 31 RHMSSSK--LFIGGLSYNVDDQSLRDAFTT-YGDVVEARVITDRETGRSRGFGFVNFTSE 87
Query: 219 SEQVRAMTEMQGVVCSTRPMRIGPAANK 246
A++ M G + R +R+ A ++
Sbjct: 88 ESATSALS-MDGQDLNGRNIRVSYANDR 114
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 273 NNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRC------GFVQFADRSCAEEA 326
+++ +F+G L NV D LR F YGD+V ++ + GFV F A A
Sbjct: 34 SSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSA 93
Query: 327 LRVLNGTLLGGQNVRLSWG 345
L ++G L G+N+R+S+
Sbjct: 94 LS-MDGQDLNGRNIRVSYA 111
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
L+IG L Y +D+ L F G++ +VI ++ T +S G+GF+ FTS A L +
Sbjct: 38 LFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSAL-SM 96
Query: 134 NGTIMPNGGQNFRLNWA 150
+G + G+N R+++A
Sbjct: 97 DGQDL--NGRNIRVSYA 111
>IMGA|AC149546_31.4 RNA-binding region RNP-1 (RNA recognition motif)
chr08_pseudomolecule_IMGAG_V2 17368014-17360795 E
EGN_Mt071002 20080227
Length = 971
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 45/174 (25%)
Query: 165 DYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRA 224
++ IFVG L D T+ L ++F+ R V ++ + TS+ +GY VRFA++ +A
Sbjct: 389 EHEIFVGGLDRDTTEEDLKKIFQ-RIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKA 447
Query: 225 MTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDP 284
++EM+ V G GT P +N T+F+GN+
Sbjct: 448 LSEMKNPVIR--------------GKRCGTSPSE--------------DNDTLFLGNICN 479
Query: 285 NVTDDHLRQVFGLYG-----------DLVHVKIPQGKRCGFVQFADRSCAEEAL 327
T + ++Q YG D+ H + +G F++F SC +A+
Sbjct: 480 TWTKEAVKQKLKDYGVEGVENITLVPDVQHEGLSRG--FAFLEF---SCHADAM 528
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
+++G L E L + F GE+ V++ +N +T+++ GY + F ++ A++ L
Sbjct: 392 IFVGGLDRDTTEEDLKKIFQRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSEM 451
Query: 134 NGTIMPNGGQNFRLNWATFSAGGERRHDDSPDY---TIFVGDLAADVTDYHLTEVFRTR- 189
++ +R SP T+F+G++ T + + +
Sbjct: 452 KNPVIRG-----------------KRCGTSPSEDNDTLFLGNICNTWTKEAVKQKLKDYG 494
Query: 190 YNSVKGAKVVID-RLTSRTKGYGFVRFADESEQVRAMTEMQ--GVVCSTRPMRIGPAANK 246
V+ +V D + ++G+ F+ F+ ++ + A +Q GV+
Sbjct: 495 VEGVENITLVPDVQHEGLSRGFAFLEFSCHADAMLAYKRLQKPGVI-------------- 540
Query: 247 NLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHV-- 304
G T A + + P E ++F+ L + +DH+R+ YG++V +
Sbjct: 541 -FGHAERTAKVAFAEPIREPDPEIMAQVKSVFINGLPLHWDEDHVREHLKSYGEIVKIVL 599
Query: 305 --KIPQGKR--CGFVQFADRSCAEEALRVLNGTLLG 336
K+ KR GFV F+ A + +N + LG
Sbjct: 600 ARKMSTSKRKDHGFVDFSTHEAALACVDGVNKSELG 635
>IMGA|AC202518_12.3 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 16448553-16449568 E
EGN_Mt071002 20080227
Length = 112
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
L+I L Y +E L F G++ VKVI N T +S+GYGF+ F S A +
Sbjct: 35 LFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAATARKEL 94
Query: 134 NGTIMPNGGQNFRLNWA 150
+G I+ G+ R+ +A
Sbjct: 95 HGQIV--DGRRIRVGYA 109
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 159 RHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADE 218
RH S +F+ L+ + + L + F ++ + KV+ + T +KGYGFVRF E
Sbjct: 28 RHHSST--KLFIAGLSYNTNETVLRDTFE-QHGQIIEVKVICNHRTGESKGYGFVRFNSE 84
Query: 219 SEQVRAMTEMQGVVCSTRPMRIGPA 243
+ A E+ G + R +R+G A
Sbjct: 85 TAAATARKELHGQIVDGRRIRVGYA 109
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 273 NNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKI------PQGKRCGFVQFADRSCAEEA 326
++T +F+ L N + LR F +G ++ VK+ + K GFV+F + A A
Sbjct: 31 SSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAATA 90
Query: 327 LRVLNGTLLGGQNVRLSWG 345
+ L+G ++ G+ +R+ +
Sbjct: 91 RKELHGQIVDGRRIRVGYA 109
>IMGA|AC134242_17.5 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 19467865-19466799 F
EGN_Mt071002 20080227
Length = 164
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 165 DYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRA 224
+Y FVG LA TD E ++Y + +K++ DR T R++G+GFV FADE A
Sbjct: 7 EYRCFVGGLAW-ATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDA 65
Query: 225 MTEMQGVVCSTRPMRIGPA 243
+ M G R + + A
Sbjct: 66 IEGMNGQDMDGRNITVNEA 84
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 75 WIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTYN 134
++G L + D L + F+ GE+ K+I ++ T +S G+GF+ F ++ N
Sbjct: 11 FVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEGMN 70
Query: 135 GTIMPNGGQNFRLNWA 150
G M G+N +N A
Sbjct: 71 GQDMD--GRNITVNEA 84
>IMGA|CU024864_17.4 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 25794794-25795821 H
EGN_Mt071002 20080227
Length = 135
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTE 227
+FVG L+ V + L + F + + V ++V D+ + R +G+GFV F++E A
Sbjct: 38 LFVGGLSWSVDEKSLKDAFSS-FGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDA 96
Query: 228 MQGVVCSTRPMRIGPAANKNLG 249
M G RP+RI A K G
Sbjct: 97 MDGKALLGRPLRINFALEKPRG 118
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 74 LWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTY 133
L++G L + +DE L F+ G++ V+++ +K++ ++ G+GF+ F++ A+
Sbjct: 38 LFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAM 97
Query: 134 NGTIMPNGGQNFRLNWA 150
+G + G+ R+N+A
Sbjct: 98 DGKALL--GRPLRINFA 112
>IMGA|AC157981_22.5 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 38680301-38682192 E
EGN_Mt071002 20080227
Length = 476
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 88 LYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTYNGT---------IM 138
L + F+ GE+ +++++ T ++ G+GF+ F A A+ ++Q + +
Sbjct: 5 LREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAKKAV 64
Query: 139 PNGGQNF--RLNWATFSAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGA 196
P QN R + + + G R IFVG LA+ VT+ + F ++ ++
Sbjct: 65 PRDDQNVLSRTSGSIHGSPGPGRTRK-----IFVGGLASTVTESDFKKYF-DQFGTITDV 118
Query: 197 KVVIDRLTSRTKGYGFVRFADES--EQV--RAMTEMQGVVCSTRPMRIGPAANKNLGTGT 252
V+ D T R +G+GF+ + E +QV + E+ G + + A K L G
Sbjct: 119 VVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVK-----RAVPKELSPGP 173
Query: 253 GTQPKASY 260
P + Y
Sbjct: 174 ARSPLSGY 181
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 29/169 (17%)
Query: 182 LTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQ---VRAMTEMQGVVCSTRPM 238
L E F T Y VK A ++ DR T R +G+GFV F D + V+ + G + +
Sbjct: 5 LREYFST-YGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAK-- 61
Query: 239 RIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTIFVGNLDPNVTDDHLRQVFGLY 298
+ P ++N+ + T S S GP IFVG L VT+ ++ F +
Sbjct: 62 KAVPRDDQNVLSRT----SGSIHGSPGPGRTRK-----IFVGGLASTVTESDFKKYFDQF 112
Query: 299 GDLVHVKI--------PQGKRCGFVQFADRSCAEEAL----RVLNGTLL 335
G + V + P+G GF+ + ++ L LNG ++
Sbjct: 113 GTITDVVVMYDHNTQRPRG--FGFITYDSEEAVDQVLLKTFHELNGKMV 159
>IMGA|AC134242_43.5 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 19512181-19511124 F
EGN_Mt071002 20080227
Length = 161
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 165 DYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRA 224
+Y FVG LA + L + F ++Y + +K++ DR T R++G+GFV FA+E A
Sbjct: 5 EYRCFVGGLAWATDNEALEKAF-SQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDA 63
Query: 225 MTEMQGVVCSTRPMRIGPA 243
+ M G R + + A
Sbjct: 64 IEAMNGQDLDGRNITVNQA 82
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 75 WIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAERILQTYN 134
++G L + D L + F+ GE+ K+I ++ T +S G+GF+ F + ++ N
Sbjct: 9 FVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEAMN 68
Query: 135 GTIMPNGGQNFRLNWA 150
G + G+N +N A
Sbjct: 69 GQDLD--GRNITVNQA 82
>IMGA|AC161788_24.4 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 7561377-7554566 E
EGN_Mt071002 20080227
Length = 596
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 42/218 (19%)
Query: 153 SAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGF 212
SAGG + PD IFVG L T+ + E+ T + ++G +V DR T +KGY F
Sbjct: 374 SAGGL----EGPD-RIFVGGLPYYFTETQIRELLET-FGPLRGFDLVKDRETGNSKGYAF 427
Query: 213 VRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDP 272
+AD + A + G+ + + + A N GT TQPK ++ +
Sbjct: 428 CVYADLAVTDIACAALNGIKMGDKTLTVRRA---NQGT---TQPKPEQESILMHAQQQIA 481
Query: 273 NNTTIFVGNL---------------------DPNVTDDHLRQVFGLYGDLVHVKIPQGKR 311
IF L D D +RQ +G LV+V IP+ +
Sbjct: 482 LQKLIFQPALVATKVVCLTNAVAPEELKEDEDFEEIIDDMRQECSKFGSLVNVVIPRPQP 541
Query: 312 CG---------FVQFADRSCAEEALRVLNGTLLGGQNV 340
G F+++ D A +A LNG GG V
Sbjct: 542 DGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEV 579
>IMGA|AC124956_60.4 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 7399623-7406434 E
EGN_Mt071002 20080227
Length = 596
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 42/218 (19%)
Query: 153 SAGGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGF 212
SAGG + PD IFVG L T+ + E+ T + ++G +V DR T +KGY F
Sbjct: 374 SAGGL----EGPD-RIFVGGLPYYFTETQIRELLET-FGPLRGFDLVKDRETGNSKGYAF 427
Query: 213 VRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDP 272
+AD + A + G+ + + + A N GT TQPK ++ +
Sbjct: 428 CVYADLAVTDIACAALNGIKMGDKTLTVRRA---NQGT---TQPKPEQESILMHAQQQIA 481
Query: 273 NNTTIFVGNL---------------------DPNVTDDHLRQVFGLYGDLVHVKIPQGKR 311
IF L D D +RQ +G LV+V IP+ +
Sbjct: 482 LQKLIFQPALVATKVVCLTNAVAPEELKEDEDFEEIIDDMRQECSKFGSLVNVVIPRPQP 541
Query: 312 CG---------FVQFADRSCAEEALRVLNGTLLGGQNV 340
G F+++ D A +A LNG GG V
Sbjct: 542 DGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEV 579
>IMGA|AC150443_41.5 RNA-binding region RNP-1 (RNA recognition motif)
chr07_pseudomolecule_IMGAG_V2 32023635-32021981 E
EGN_Mt071002 20080227
Length = 205
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 272 PNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRC-----GFVQFADRSCAEEA 326
P ++V N+ NVT + L+++F +G++ V +P GK GF+ +A+RS A +A
Sbjct: 3 PLVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASGKRDFGFIHYAERSSALKA 62
Query: 327 LRVLNGTLLGGQNVRLSWGRSPSNKQ 352
++ + GQ + + + + K+
Sbjct: 63 VKETEKYEIDGQALEVVIAKPQAEKK 88
>IMGA|AC149134_50.5 RNA-binding region RNP-1 (RNA recognition motif)
chr07_pseudomolecule_IMGAG_V2 23568765-23563374 E
EGN_Mt071002 20080227
Length = 486
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 19/177 (10%)
Query: 162 DSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQ 221
D+ IFV L D T L F ++Y ++ K V D+++ ++KGYGF+ F S
Sbjct: 123 DASHRKIFVHGLGWDTTSATLINAF-SQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGA 181
Query: 222 VRAMTEMQGVV----CSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTI 277
A+ E Q + + + IGP + + ++ I
Sbjct: 182 RNALKEPQKKIGNRMTACQLASIGPVQQTP---------VVAAAPAPLVVAGSEYTQRKI 232
Query: 278 FVGNLDPNVTDDHLRQVFGLYGDL----VHVKIPQGKRCGFVQFADRSCAEEALRVL 330
++ N+ P + L F +G++ + + GK GF F +S AE A R L
Sbjct: 233 YISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKS-AESARRAL 288
>IMGA|CU062643_11.3 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 28273303-28271287 H
EGN_Mt071002 20080227
Length = 290
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 166 YTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAM 225
Y +FV + + + E F + V A+V+ R GYGFV + + E A+
Sbjct: 182 YNLFVANFPYEARSKDVKEFFDSGTGKVVSAEVIFHENPRRPSGYGFVSYKSKKEADEAL 241
Query: 226 TEMQGVVCSTRPMRIGPA 243
E QG RP+R+ P+
Sbjct: 242 AEFQGKNFMGRPLRVAPS 259
>IMGA|AC146704_27.4 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 6163159-6161440 F
EGN_Mt071002 20080227
Length = 128
Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 155 GGERRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVR 214
GE DSP Y ++VG+LA +VT L + F + N++ AKV TS++ G+GFV
Sbjct: 42 AGESTFVDSP-YKVYVGNLAKNVTSDSLKKFFSEKGNALS-AKVSRAPGTSKSSGFGFVT 99
Query: 215 FADESEQVRAMTEMQGVVCSTRPMRIGPA 243
F+ + + A++ + + +R+ A
Sbjct: 100 FSSDEDVEAAISSFNNALLEGQKIRVNKA 128
Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 277 IFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRC------GFVQFADRSCAEEALRVL 330
++VGNL NVT D L++ F G+ + K+ + GFV F+ E A+
Sbjct: 54 VYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSF 113
Query: 331 NGTLLGGQNVRLS 343
N LL GQ +R++
Sbjct: 114 NNALLEGQKIRVN 126
Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 69 DEVRTLWIGDLQYWMDENYLYQCFAHTGELATVKVIRNKNTNQSEGYGFLEFTSRAGAER 128
D +++G+L + + L + F+ G + KV R T++S G+GF+ F+S E
Sbjct: 49 DSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEA 108
Query: 129 ILQTYNGTIMPNGGQNFRLNWA 150
+ ++N ++ GQ R+N A
Sbjct: 109 AISSFNNALLE--GQKIRVNKA 128
>IMGA|CT009540_36.5 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 33868874-33866998 H
EGN_Mt071002 20080227
Length = 251
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 146 RLNWATFSAGGERRHDDSPDYT-IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLT 204
R N T S +H YT IFVG LA + L F ++ + A V+ DR T
Sbjct: 5 RQNKITMSLNVVPKHVGDTTYTKIFVGGLAWETKRDTLKRYF-DQFGDILEAVVITDRTT 63
Query: 205 SRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLG 249
++KGYGFV F D + + A + PM G AN NL
Sbjct: 64 GKSKGYGFVTFKDPNSAILACQ-------NPNPMIDGRRANCNLA 101
>IMGA|AC160838_3.5 RNA-binding region RNP-1 (RNA recognition motif)
chr08_pseudomolecule_IMGAG_V2 25378792-25373634 E
EGN_Mt071002 20080227
Length = 555
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 272 PNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKR------CGFVQFADRSCAEE 325
++++I+VG L TD+ +R VF LYG ++ VKI +R C FV F + A +
Sbjct: 4 DDDSSIYVGGLPYGATDETIRTVFNLYGAILDVKIINDQRTIGKCYC-FVTFTNPRSAID 62
Query: 326 ALRVLNGTLLGGQNVRLSWGRS 347
A+ +NG + G+ V+++ +S
Sbjct: 63 AINDMNGRTINGRVVKVNGVKS 84
>IMGA|AC145289_29.5 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 13200806-13192265 E
EGN_Mt071002 20080227
Length = 272
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTE 227
+FVG LA + + + F ++ + A V+ D+ T R+KGYGFV F + +RA +
Sbjct: 18 VFVGGLAWETQKETMKKYFE-QFGEILEAVVITDKATGRSKGYGFVTFREPDAAMRACVD 76
Query: 228 MQGVV------CSTRPM---RIGPAANKNLGTGTGTQPKASYQNSQGPQNENDPNNTTI 277
++ C+ + R P+ K+ G G + S+Q G P+ T
Sbjct: 77 AAPIIDGRRANCNLASLGVQRSKPSTPKHGGGGRNIRVMGSFQTGFGGVGSAFPSAATF 135
>IMGA|AC131026_44.4 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 32295786-32291333 E
EGN_Mt071002 20080227
Length = 281
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 168 IFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFADESEQVRAMTE 227
+FVG LA + + F ++ + A V+ D+ T R+KGYGFV F D RA +
Sbjct: 31 VFVGGLAWETQSETMRRYFE-QFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACAD 89
Query: 228 MQGVVCSTRPMRIGPAANKNLGTGTGTQPKASYQNSQGPQ-NENDPNNTTIFVGNLDP 284
V+ R AN NL AS+ +GP + + +VG+L P
Sbjct: 90 PSPVIDGRR-------ANCNL---------ASHGRPRGPPISYGRVRPASPYVGSLQP 131
>IMGA|AC146760_9.5 RNA-binding region RNP-1 (RNA recognition motif)
chr03_pseudomolecule_IMGAG_V2 22846699-22850069 E
EGN_Mt071002 20080227
Length = 248
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 275 TTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIP------QGKRCGFVQFADRSCAEEALR 328
T++ V NL + + LR+ FG +G L + +P Q + GF+QF D + A +A
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKY 100
Query: 329 VLNGTLLGGQNVRLSWGRSPSNKQTQ 354
++G +L G+ + + + K T+
Sbjct: 101 HMDGQVLLGREITVVFAEENRKKPTE 126
>IMGA|AC150978_38.4 RNA-binding region RNP-1 (RNA recognition motif)
chr01_pseudomolecule_IMGAG_V2 26967108-26973536 E
EGN_Mt071002 20080227
Length = 443
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 198 VVIDRLTSRTKGYGFVRFADESEQVRAMTEMQGVVCSTRPMRIGPAANKNLGTGTGTQPK 257
+V +L + ++ D + A+ ++G + + + + + + N+ G T
Sbjct: 283 IVRIKLLRNKPDHALIQMGDGFQAELAVHFLKGAMLFDKRLEVNFSKHPNITQGADTH-- 340
Query: 258 ASYQNSQGPQ-NENDPNN--------TTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQ 308
Y NS + N N N I + L ++T+D + + +G +V+ K+ +
Sbjct: 341 -DYSNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDITEDEIVTLLEEHGTIVNSKVFE 399
Query: 309 --GKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGR 346
GK+ G VQF A EAL + T L G +R+S+ +
Sbjct: 400 MNGKKQGLVQFETEDQATEALVCKHATSLSGSVIRISYSQ 439
>IMGA|AC174277_12.4 RNA-binding region RNP-1 (RNA recognition motif)
chr04_pseudomolecule_IMGAG_V2 39131449-39132842 F
EGN_Mt071002 20080227
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 158 RRHDDSPDYTIFVGDLAADVTDYHLTEVFRTRYNSVKGAKVVIDRLTSRTKGYGFVRFAD 217
RR+D++ ++ V +L+ D + L E+FR + +V V ID+ T ++G+GFV F
Sbjct: 206 RRNDEN---SVRVTNLSEDTREPDLLELFRP-FGAVSRVYVAIDQKTGMSRGFGFVNFVS 261
Query: 218 ESEQVRAMTEMQG 230
+ RA+ ++ G
Sbjct: 262 REDAQRAINKLNG 274