Miyakogusa Predicted Gene
- chr4.CM0281.230.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM0281.230.nc - phase: 0
(1398 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC138087_49.4 N-6 Adenine-specific DNA methylase chr08_pseu... 1862 0.0
IMGA|AC183430_29.4 N-6 Adenine-specific DNA methylase chr08_pseu... 1813 0.0
IMGA|AC122723_28.5 N-6 Adenine-specific DNA methylase chr07_pse... 65 2e-10
>IMGA|AC138087_49.4 N-6 Adenine-specific DNA methylase
chr08_pseudomolecule_IMGAG_V2 21825399-21833107 E
EGN_Mt071002 20080227
Length = 1446
Score = 1862 bits (4823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 991/1431 (69%), Positives = 1082/1431 (75%), Gaps = 73/1431 (5%)
Query: 1 MASNPPFHVEDQTDEDFFDKLVEEDMSPVKSGSNDSDDVKAFANLXXXXXXXXXXXXXXX 60
MASNPPFHVEDQ DEDFFDKLVE+D+ V +NDSDDVKAF+NL
Sbjct: 1 MASNPPFHVEDQDDEDFFDKLVEDDVGNVNDEANDSDDVKAFSNLSIGGDDADVNASAFE 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXVKLDGGNSQEGGSFLVSSSESGCDSVMDRGGDNAVG 120
VKLDGGN QEG S SGCD +MDR D+ +
Sbjct: 61 NSSGGGSGGEGKERKEEGD-----VKLDGGNVQEG-------SSSGCDGMMDRS-DHGME 107
Query: 121 SEVGPDLSVGKSNGMHNSGIKVVDWNAFNAADSNGGTGFGSYSDFFTEFEDQSGKGF-HD 179
S S KSN + +K DWNAFN DSNGG G SYSDFF+EF DQ+GKG+ HD
Sbjct: 108 SRNSSGSSADKSNRRSSLDVKEKDWNAFNV-DSNGGAGSESYSDFFSEFGDQNGKGYDHD 166
Query: 180 SN----------------------KTEVKPGNEIANDSLDASANYVQYQDGQGYDASTGN 217
N TEVK GNEI +D ++AS +YVQYQ+GQ YDAS N
Sbjct: 167 LNTEVKHANEIPGDQYAQTYNRDSNTEVKLGNEIPSDGMNASVDYVQYQEGQSYDASARN 226
Query: 218 GISEQQDPNSSQYWESLYPGWKYDHNTGQWYQVDDPNATATTQGGSDASTGVGWTAAADA 277
S +D NSSQYWESLYPGWKYD+NTGQWYQVD+ NATA TQG S+ +T
Sbjct: 227 STS-GEDVNSSQYWESLYPGWKYDYNTGQWYQVDEHNATAATQGSSEVNT---------- 275
Query: 278 KAEVSYLQQTPQS-VAGTLAETGTTESVSSWNQVSQGNNGYPEHMVFDPQYPGWYYDTIA 336
AEVSY+QQT QS VAGTLAE+ TE+V SWNQVSQGNNGYPEHM+FDPQYPGWYYDTIA
Sbjct: 276 -AEVSYMQQTAQSAVAGTLAESAATETVPSWNQVSQGNNGYPEHMIFDPQYPGWYYDTIA 334
Query: 337 QEWRSLETYNSSIQSATQGLQNGNASTSSFAHNGNNFYGEYGQAGNYEPQGISSQAANDS 396
QEWRSLETY+SSIQ A QG NG+AS+ +F+HN N+ Y +YGQ G YE QG+ SQAAN++
Sbjct: 335 QEWRSLETYHSSIQYAVQGHGNGHASSGTFSHNDNSLYRDYGQVGYYESQGVGSQAANNN 394
Query: 397 WGGSYGISHQQGLETSTTQSAIRSGDSATSGGNQQYDHPFGSSISFNRDQQNTSSSFGSV 456
W GSYGI+HQQ L+ TT +A +SG SA GGNQQ+DH FGSS S N++QQN SSSFGSV
Sbjct: 395 WSGSYGINHQQDLDRHTTDTATKSGGSAY-GGNQQFDHSFGSSNSVNKNQQNASSSFGSV 453
Query: 457 PSYNKANPDHGLANGTLEVQNFAPSGNYGQHFNYSNTQFDEQKKFSNDYADSQKPLSYSR 516
P YNK N HGL NGT+EVQ FAPSGN+GQH+NYSNTQFDEQK SNDYA+S +P YS
Sbjct: 454 PLYNKVNHGHGLVNGTVEVQRFAPSGNFGQHYNYSNTQFDEQKNISNDYAESHQPFGYSN 513
Query: 517 QSFQGGHQQSYAPNVGRSSAGRPPHALVTFGFGGKLIVMKDSNLLSSPYEXXXXXXXXXX 576
QS+Q GHQQSYAPNVGRSSAGRPPHALVTFGFGGKLI++KDS+L SS Y
Sbjct: 514 QSYQSGHQQSYAPNVGRSSAGRPPHALVTFGFGGKLIILKDSSLSSSTYGSQGAAQGSVS 573
Query: 577 XLNLMEVVAGSIDSSSIGNGACDYFRALSQQSFPGPLVGGSVGSKELHKWIDERITHCGS 636
LNLME V+GSI SSSIGNGA DYFRAL QQS PGPLVGGSVGSKEL+KWIDERI HCGS
Sbjct: 574 VLNLMEAVSGSIGSSSIGNGAGDYFRALGQQSIPGPLVGGSVGSKELNKWIDERIAHCGS 633
Query: 637 PDMDYXXXXXXXXXXXXXXIACQHYGKLRSPFGTDNILKENDNPGSAVAKLFASAKMSGK 696
PDMDY IACQ+YGKLRSPFGTD ILK+ND PGSAVAKLFASAKMSGK
Sbjct: 634 PDMDYKKSERMRLLLSLLKIACQYYGKLRSPFGTDTILKDNDTPGSAVAKLFASAKMSGK 693
Query: 697 EFTQYGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQL 756
E YGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQL
Sbjct: 694 E---YGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQL 750
Query: 757 GEQFYVDTVKQMSLRQLVAGSPLRTLCLLIAGQPAEVFXXXXXXXXXXXAFDMPQQ--HV 814
GE+FYVDTVKQM+LRQLVAGSPLRTLCLLIAGQPAEVF AF+MPQ +
Sbjct: 751 GEKFYVDTVKQMALRQLVAGSPLRTLCLLIAGQPAEVFSSDSSNSGDPSAFNMPQNPAQL 810
Query: 815 QFGSNGMLEDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFES 874
QFGS+GML+DWEENLAVIT+NRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFES
Sbjct: 811 QFGSSGMLDDWEENLAVITSNRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFES 870
Query: 875 YSDSARMCLIGADHWKFPRTYASPDAIQRTELYEYSKVLGNSQFILLPFQPYKIIYACML 934
YSDSAR+CLIGADHWKFPRTYASP+AIQRTELYEYSKVLGNSQFILLPFQPYK+IYA ML
Sbjct: 871 YSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYML 930
Query: 935 AEVGKLSDSLKYCQAVLKSLKTGRAPEAETWKQLISSLEERIRAHQQGGYAANLAPAKLV 994
AEVGK+SDSLKYCQAVLKSLKTGRAPE ETWKQ +SSLEERIR HQQGGYAANLAP KLV
Sbjct: 931 AEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQRLSSLEERIRTHQQGGYAANLAPGKLV 990
Query: 995 GKLLNFFDSTAHRVVGGLPPPAPSSSQGTAQGNEQTFQTTAHRVSNSQSTMAMSSLVPSA 1054
GKLLNFFDSTAHRVVGGLPPPAP SSQG GNEQ +Q+ AHRVSNSQSTMAMSSLVPS
Sbjct: 991 GKLLNFFDSTAHRVVGGLPPPAP-SSQGNVHGNEQNYQSGAHRVSNSQSTMAMSSLVPSG 1049
Query: 1055 SM----EWTADNNRTTKPNRSASEPDFGRTPRQGKSPD-----SGATSRFSRFGFGSQLL 1105
SM EWTADNNR TK NRS SEPDFGR+PRQ S D S TSRFSRF FGSQLL
Sbjct: 1050 SMEPNGEWTADNNRMTKSNRSVSEPDFGRSPRQETSHDAQGKASEGTSRFSRFSFGSQLL 1109
Query: 1106 QKTVGLVLRPRPGKQAKLGEKNKFYYDENLKRWVXXXXXXXXXXXXXXXXXXXXVFQNGS 1165
QKT+GLVL+PRPGKQAKLGEKNKFYYDENLKRWV FQNG
Sbjct: 1110 QKTMGLVLKPRPGKQAKLGEKNKFYYDENLKRWVEEGAAPPAEETALPPPPTTAAFQNGL 1169
Query: 1166 TDYNLKSALKTEVSPSNEGSDLKTSSPELTXXXXXXXXSTNQFSARGRLGVRSRYVDTFN 1225
T+YNL+SALKTE PS EGSDLKTS+PELT TN FSARGR+G+RSRYVDTFN
Sbjct: 1170 TEYNLQSALKTEGPPSKEGSDLKTSNPELTPGIPPIPPGTNHFSARGRVGIRSRYVDTFN 1229
Query: 1226 QGGGSSANLFQTPPVPSVKPAVTANAKFFIPAPAPSSSEQTMEAIAENNQEDSSALENPS 1285
QGGG+SANLFQ+P VPS KP V ANAKFFIP PAPSS+EQTMEAI ENNQED A ENPS
Sbjct: 1230 QGGGNSANLFQSPSVPSAKPVVAANAKFFIPTPAPSSNEQTMEAIEENNQEDDLAYENPS 1289
Query: 1286 TSSRNDWAYLSPKTPSPMARQRFPSMGNIPSPGAMINGXXXXXXXXXXXXXXXASWSGGS 1345
TS RNDW++ SPK S QR PSMGN + A+++G SW G +
Sbjct: 1290 TSYRNDWSFQSPKHASASTWQRCPSMGNFANHEAVVSG----SNSRSPHSRRTVSWGGST 1345
Query: 1346 YGDSFYPTTKMNEAKPLGEALGMPPSTFMPDDASLMHTPVKSGSFG-DLHE 1395
D Y TKM E PLGEALGMPPST+M DD S M T +KSG+FG DLHE
Sbjct: 1346 --DVTYSPTKMREIMPLGEALGMPPSTYMSDDISSMRTSMKSGNFGEDLHE 1394
>IMGA|AC183430_29.4 N-6 Adenine-specific DNA methylase
chr08_pseudomolecule_IMGAG_V2 21810059-21801825 E
EGN_Mt071002 20080227
Length = 1426
Score = 1813 bits (4695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 975/1431 (68%), Positives = 1065/1431 (74%), Gaps = 93/1431 (6%)
Query: 1 MASNPPFHVEDQTDEDFFDKLVEEDMSPVKSGSNDSDDVKAFANLXXXXXXXXXXXXXXX 60
MASNPPFHVEDQ DEDFFDKLVE+D+ V +NDSDDVKAF+NL
Sbjct: 1 MASNPPFHVEDQDDEDFFDKLVEDDVGNVNDEANDSDDVKAFSNLSIGGDDADVNASAFE 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXVKLDGGNSQEGGSFLVSSSESGCDSVMDRGGDNAVG 120
VKLDGGN QEG S SGCD +MDR D+ +
Sbjct: 61 NSSGGGNGGEGKERKEEGD-----VKLDGGNVQEG-------SSSGCDGMMDRS-DHGME 107
Query: 121 SEVGPDLSVGKSNGMHNSGIKVVDWNAFNAADSNGGTGFGSYSDFFTEFEDQSGKGF-HD 179
S S KSN + +K DWNAFN DSNGG G SYSDFF+EF DQ+GKG+ HD
Sbjct: 108 SRNSSGSSADKSNRRSSLDVKEKDWNAFNV-DSNGGAGSESYSDFFSEFGDQNGKGYDHD 166
Query: 180 SN----------------------KTEVKPGNEIANDSLDASANYVQYQDGQGYDASTGN 217
N TEVK GNEI +D ++AS +YVQYQ+GQ YDAS N
Sbjct: 167 LNTEVKHANEIPGDQYAQTYNRDSNTEVKLGNEIPSDGMNASVDYVQYQEGQSYDASARN 226
Query: 218 GISEQQDPNSSQYWESLYPGWKYDHNTGQWYQVDDPNATATTQGGSDASTGVGWTAAADA 277
S +D NSSQYWESLYPGWKYD+NTGQWYQVD+ NATA TQG S+ +T
Sbjct: 227 STS-GEDVNSSQYWESLYPGWKYDYNTGQWYQVDEHNATAATQGSSEVNT---------- 275
Query: 278 KAEVSYLQQTPQS-VAGTLAETGTTESVSSWNQVSQGNNGYPEHMVFDPQYPGWYYDTIA 336
AEVSY+QQT QS VAGTLAE+ TE+V SWNQVSQGNNGYPEHM+FDPQYPGWYYDTIA
Sbjct: 276 -AEVSYMQQTAQSAVAGTLAESAATETVPSWNQVSQGNNGYPEHMIFDPQYPGWYYDTIA 334
Query: 337 QEWRSLETYNSSIQSATQGLQNGNASTSSFAHNGNNFYGEYGQAGNYEPQGISSQAANDS 396
QEWRSLETY+SSIQ A QG NG+AS+ +F+HN N+ Y +YGQ G YE QG+ SQAAN++
Sbjct: 335 QEWRSLETYHSSIQYAVQGHGNGHASSGTFSHNDNSLYRDYGQVGYYESQGVGSQAANNN 394
Query: 397 WGGSYGISHQQGLETSTTQSAIRSGDSATSGGNQQYDHPFGSSISFNRDQQNTSSSFGSV 456
W GSYGI+HQQ L+ TT +A +SG SA GGNQQ+DH FGSS S N++QQN SSSFGSV
Sbjct: 395 WSGSYGINHQQDLDRHTTDTATKSGGSAY-GGNQQFDHSFGSSNSVNKNQQNASSSFGSV 453
Query: 457 PSYNKANPDHGLANGTLEVQNFAPSGNYGQHFNYSNTQFDEQKKFSNDYADSQKPLSYSR 516
P YNK N HGL NGT+EVQ FAPSGN+GQH+NYSNTQFDEQK SNDYA+S +P YS
Sbjct: 454 PLYNKVNHGHGLVNGTVEVQRFAPSGNFGQHYNYSNTQFDEQKNISNDYAESHQPFGYSN 513
Query: 517 QSFQGGHQQSYAPNVGRSSAGRPPHALVTFGFGGKLIVMKDSNLLSSPYEXXXXXXXXXX 576
QS+Q GHQQSYAPNVGRSSAGRPPHALVTFGFGGKLI++KDS+L SS Y
Sbjct: 514 QSYQSGHQQSYAPNVGRSSAGRPPHALVTFGFGGKLIILKDSSLSSSTYGSQGAAQGSVS 573
Query: 577 XLNLMEVVAGSIDSSSIGNGACDYFRALSQQSFPGPLVGGSVGSKELHKWIDERITHCGS 636
LNLME V+GSI SSSIGNGA DYFRAL QQS PGPLVGGSVGSKEL+KWIDERI HCGS
Sbjct: 574 VLNLMEAVSGSIGSSSIGNGAGDYFRALGQQSIPGPLVGGSVGSKELNKWIDERIAHCGS 633
Query: 637 PDMDYXXXXXXXXXXXXXXIACQHYGKLRSPFGTDNILKENDNPGSAVAKLFASAKMSGK 696
PDMDY IACQ+YGKLRSPFGTD ILK+ND PGSAVAKLFASAKMSGK
Sbjct: 634 PDMDYKKSERMRLLLSLLKIACQYYGKLRSPFGTDTILKDNDTPGSAVAKLFASAKMSGK 693
Query: 697 EFTQYGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQL 756
E YGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQL
Sbjct: 694 E---YGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQL 750
Query: 757 GEQFYVDTVKQMSLRQLVAGSPLRTLCLLIAGQPAEVFXXXXXXXXXXXAFDMPQQ--HV 814
GE+FYVDTVKQM+LRQLVAGSPLRTLCLLIAGQPAEVF AF+MPQ +
Sbjct: 751 GEKFYVDTVKQMALRQLVAGSPLRTLCLLIAGQPAEVFSSDSSNSGDPSAFNMPQNPAQL 810
Query: 815 QFGSNGMLEDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFES 874
QFGS+GML+DWEENLAVIT+NRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFES
Sbjct: 811 QFGSSGMLDDWEENLAVITSNRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFES 870
Query: 875 YSDSARMCLIGADHWKFPRTYASPDAIQRTELYEYSKVLGNSQFILLPFQPYKIIYACML 934
YSDSAR+CLIGADHWKFPRTYASP+AIQRTELYEYSKVLGNSQFILLPFQPYK+IYA ML
Sbjct: 871 YSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYML 930
Query: 935 AEVGKLSDSLKYCQAVLKSLKTGRAPEAETWKQLISSLEERIRAHQQGGYAANLAPAKLV 994
AEVGK+SDSLKYCQAVLKSLKTGRAPE GGYAANLAP KLV
Sbjct: 931 AEVGKVSDSLKYCQAVLKSLKTGRAPE--------------------GGYAANLAPGKLV 970
Query: 995 GKLLNFFDSTAHRVVGGLPPPAPSSSQGTAQGNEQTFQTTAHRVSNSQSTMAMSSLVPSA 1054
GKLLNFFDSTAHRVVGGLPPPAP SSQG GNEQ +Q+ AHRVSNSQSTMAMSSLVPS
Sbjct: 971 GKLLNFFDSTAHRVVGGLPPPAP-SSQGNVHGNEQNYQSGAHRVSNSQSTMAMSSLVPSG 1029
Query: 1055 SM----EWTADNNRTTKPNRSASEPDFGRTPRQGKSPD-----SGATSRFSRFGFGSQLL 1105
SM EWTADNNR TK NRS SEPDFGR+PRQ S D S TSRFSRF FGSQLL
Sbjct: 1030 SMEPNGEWTADNNRMTKSNRSVSEPDFGRSPRQETSHDAQGKASEGTSRFSRFSFGSQLL 1089
Query: 1106 QKTVGLVLRPRPGKQAKLGEKNKFYYDENLKRWVXXXXXXXXXXXXXXXXXXXXVFQNGS 1165
QKT+GLVL+PRPGKQAKLGEKNKFYYDENLKRWV FQNG
Sbjct: 1090 QKTMGLVLKPRPGKQAKLGEKNKFYYDENLKRWVEEGAAPPAEETALPPPPTTAAFQNGL 1149
Query: 1166 TDYNLKSALKTEVSPSNEGSDLKTSSPELTXXXXXXXXSTNQFSARGRLGVRSRYVDTFN 1225
T+YNL+SALKTE PS EGSDLKTS+PELT TN FSARGR+G+RSRYVDTFN
Sbjct: 1150 TEYNLQSALKTEGPPSKEGSDLKTSNPELTPGIPPIPPGTNHFSARGRVGIRSRYVDTFN 1209
Query: 1226 QGGGSSANLFQTPPVPSVKPAVTANAKFFIPAPAPSSSEQTMEAIAENNQEDSSALENPS 1285
QGGG+SANLFQ+P VPS KP V ANAKFFIP PAPSS+EQTMEAI ENNQED A ENPS
Sbjct: 1210 QGGGNSANLFQSPSVPSAKPVVAANAKFFIPTPAPSSNEQTMEAIEENNQEDDLAYENPS 1269
Query: 1286 TSSRNDWAYLSPKTPSPMARQRFPSMGNIPSPGAMINGXXXXXXXXXXXXXXXASWSGGS 1345
TS RNDW++ SPK S QR PSMGN + A+++G SW G +
Sbjct: 1270 TSYRNDWSFQSPKHASASTWQRCPSMGNFANHEAVVSG----SNSRSPHSRRTVSWGGST 1325
Query: 1346 YGDSFYPTTKMNEAKPLGEALGMPPSTFMPDDASLMHTPVKSGSFG-DLHE 1395
D Y TKM E PLGEALGMPPST+M DD S M T +KSG+FG DLHE
Sbjct: 1326 --DVTYSPTKMREIMPLGEALGMPPSTYMSDDISSMRTSMKSGNFGEDLHE 1374
>IMGA|AC122723_28.5 N-6 Adenine-specific DNA methylase
chr07_pseudomolecule_IMGAG_V2 478447-478274 H
EGN_Mt071002 20080227
Length = 57
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 902 QRTELYEYSKVLGNSQFILLPFQPYKIIYACMLAEVGKL 940
QR ELYEYSK+LG+SQFI FQPYK+IYA ML EVGK+
Sbjct: 4 QRRELYEYSKLLGSSQFIFHSFQPYKLIYAYMLVEVGKV 42